RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 SPNS2Q8IVW8 549 aa15.7■□□□□ 0.1
MDH1-210ENST00000472098 DPY19L2Q6NUT2 758 aa15.69■□□□□ 0.1
MDH1-210ENST00000472098 C3orf67Q6ZVT6 689 aa15.69■□□□□ 0.1
MDH1-210ENST00000472098 L3MBTL3Q96JM7 780 aaPredicted RBP15.69■□□□□ 0.1
MDH1-210ENST00000472098 NLRP6P59044 892 aa15.68■□□□□ 0.1
MDH1-210ENST00000472098 MMRN1Q13201 1228 aa15.68■□□□□ 0.1
MDH1-210ENST00000472098 POTEB3A0JP26 581 aa15.67■□□□□ 0.1
MDH1-210ENST00000472098 POTEBQ6S5H4 581 aa15.67■□□□□ 0.1
MDH1-210ENST00000472098 TSHZ2Q9NRE2 1034 aa15.67■□□□□ 0.1
MDH1-210ENST00000472098 FBXO22Q8NEZ5 403 aa15.66■□□□□ 0.1
MDH1-210ENST00000472098 PHF8Q9UPP1 1060 aa15.66■□□□□ 0.1
MDH1-210ENST00000472098 VSIG10Q8N0Z9 540 aa15.62■□□□□ 0.09
MDH1-210ENST00000472098 EMP3P54852 163 aa15.57■□□□□ 0.08
MDH1-210ENST00000472098 KRTAP3-3Q9BYR6 98 aa15.57■□□□□ 0.08
MDH1-210ENST00000472098 KRTAP3-2Q9BYR7 98 aa15.57■□□□□ 0.08
MDH1-210ENST00000472098 MS4A4AQ96JQ5 239 aa15.55■□□□□ 0.08
MDH1-210ENST00000472098 HOXB3P14651 431 aaPredicted RBP15.54■□□□□ 0.08
MDH1-210ENST00000472098 HS3ST6Q96QI5 342 aa15.53■□□□□ 0.08
MDH1-210ENST00000472098 PPP1R37O75864 691 aa15.52■□□□□ 0.08
MDH1-210ENST00000472098 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
MDH1-210ENST00000472098 BOLA1Q9Y3E2 137 aa15.51■□□□□ 0.07
MDH1-210ENST00000472098 FAM205CA6NFA0 338 aa15.48■□□□□ 0.07
MDH1-210ENST00000472098 CADPS2Q86UW7 1296 aa15.39■□□□□ 0.05
MDH1-210ENST00000472098 HOXB1P14653 301 aaPredicted RBP15.36■□□□□ 0.05
MDH1-210ENST00000472098 TMEM92Q6UXU6 159 aa15.35■□□□□ 0.05
MDH1-210ENST00000472098 G3V3G9 751 aa15.32■□□□□ 0.04
MDH1-210ENST00000472098 MICALL2Q8IY33 904 aa15.28■□□□□ 0.04
MDH1-210ENST00000472098 DOK7Q18PE1 504 aa15.26■□□□□ 0.03
MDH1-210ENST00000472098 ZNF710Q8N1W2 664 aa15.24■□□□□ 0.03
MDH1-210ENST00000472098 WDR70Q9NW82 654 aa15.23■□□□□ 0.03
MDH1-210ENST00000472098 NCKAP5LQ9HCH0 1330 aa15.22■□□□□ 0.03
MDH1-210ENST00000472098 PDE4AP27815 886 aa15.21■□□□□ 0.03
MDH1-210ENST00000472098 CRISPLD2Q9H0B8 497 aa15.21■□□□□ 0.03
MDH1-210ENST00000472098 ERBB3P21860 1342 aa15.19■□□□□ 0.02
MDH1-210ENST00000472098 LARP6Q9BRS8 491 aaKnown RBP15.17■□□□□ 0.02
MDH1-210ENST00000472098 VARS2Q5ST30 1063 aaKnown RBP15.16■□□□□ 0.02
MDH1-210ENST00000472098 GPR153Q6NV75 609 aa15.16■□□□□ 0.02
MDH1-210ENST00000472098 MFSD10Q14728 455 aa15.14■□□□□ 0.01
MDH1-210ENST00000472098 GPHNQ9NQX3 736 aaPredicted RBP15.13■□□□□ 0.01
MDH1-210ENST00000472098 ZSWIM6Q9HCJ5 1215 aa15.12■□□□□ 0.01
MDH1-210ENST00000472098 DDX27Q96GQ7 796 aaKnown RBP15.11■□□□□ 0.01
MDH1-210ENST00000472098 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
MDH1-210ENST00000472098 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
MDH1-210ENST00000472098 BCANQ96GW7 911 aa15.1■□□□□ 0.01
MDH1-210ENST00000472098 TMC2Q8TDI7 906 aa15.09■□□□□ 0.01
MDH1-210ENST00000472098 ZNF687Q8N1G0 1237 aa15.06■□□□□ 0
MDH1-210ENST00000472098 E2F4Q16254 413 aa15.05■□□□□ -0
MDH1-210ENST00000472098 KIF3CO14782 793 aa15.04■□□□□ -0
MDH1-210ENST00000472098 PPP1R15BQ5SWA1 713 aa15.04■□□□□ -0
MDH1-210ENST00000472098 KCNV2Q8TDN2 545 aa15.04■□□□□ -0
MDH1-210ENST00000472098 C2orf72A6NCS6 295 aa15.03■□□□□ -0
MDH1-210ENST00000472098 RNF166Q96A37 237 aaPredicted RBP15.02■□□□□ -0
MDH1-210ENST00000472098 FOXK1P85037 733 aa15.01□□□□□ -0.01
MDH1-210ENST00000472098 DSG2Q14126 1118 aa15.01□□□□□ -0.01
MDH1-210ENST00000472098 ARSIQ5FYB1 569 aa15□□□□□ -0.01
MDH1-210ENST00000472098 KHSRPQ92945 711 aaKnown RBP eCLIP14.99□□□□□ -0.012e-8■■□□□ 14.2
MDH1-210ENST00000472098 CAMK2BQ13554 666 aa14.98□□□□□ -0.01
MDH1-210ENST00000472098 NBR1Q14596 966 aa14.98□□□□□ -0.01
MDH1-210ENST00000472098 ARHGEF1Q92888 912 aaKnown RBP14.96□□□□□ -0.01
MDH1-210ENST00000472098 MYT1LQ9UL68 1186 aa14.96□□□□□ -0.01
MDH1-210ENST00000472098 PLPP6Q8IY26 295 aa14.95□□□□□ -0.02
MDH1-210ENST00000472098 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
MDH1-210ENST00000472098 ARIH1Q9Y4X5 557 aaPredicted RBP14.9□□□□□ -0.02
MDH1-210ENST00000472098 EMILIN3Q9NT22 766 aa14.86□□□□□ -0.03
MDH1-210ENST00000472098 POTEEQ6S8J3 1075 aa14.82□□□□□ -0.04
MDH1-210ENST00000472098 PTGER2P43116 358 aa14.81□□□□□ -0.04
MDH1-210ENST00000472098 ANKRD13DQ6ZTN6 518 aa14.81□□□□□ -0.04
MDH1-210ENST00000472098 LSM11P83369 360 aaKnown RBP eCLIP14.8□□□□□ -0.04
MDH1-210ENST00000472098 DPYSL4O14531 572 aa14.78□□□□□ -0.04
MDH1-210ENST00000472098 NUDT7P0C024 238 aa14.78□□□□□ -0.04
MDH1-210ENST00000472098 OXER1Q8TDS5 423 aa14.76□□□□□ -0.05
MDH1-210ENST00000472098 SLC34A2O95436 690 aa14.75□□□□□ -0.05
MDH1-210ENST00000472098 MAP3K9P80192 1104 aa14.73□□□□□ -0.05
MDH1-210ENST00000472098 UPF1Q92900 1129 aaKnown RBP eCLIP14.73□□□□□ -0.05
MDH1-210ENST00000472098 LHX6Q9UPM6 363 aa14.73□□□□□ -0.05
MDH1-210ENST00000472098 PCDHGA4Q9Y5G9 962 aa14.73□□□□□ -0.05
MDH1-210ENST00000472098 SPDYE16A6NNV3 312 aaPredicted RBP14.72□□□□□ -0.05
MDH1-210ENST00000472098 SEMA3EO15041 775 aa14.72□□□□□ -0.05
MDH1-210ENST00000472098 PTCD2Q8WV60 388 aaKnown RBP14.72□□□□□ -0.05
MDH1-210ENST00000472098 PDIA6Q15084 440 aa14.71□□□□□ -0.05
MDH1-210ENST00000472098 TESPA1A2RU30 521 aaPredicted RBP14.7□□□□□ -0.06
MDH1-210ENST00000472098 AXIN2Q9Y2T1 843 aa14.7□□□□□ -0.06
MDH1-210ENST00000472098 TBC1D12O60347 775 aa14.68□□□□□ -0.06
MDH1-210ENST00000472098 KDM4FA0A1W2PPD8 638 aa14.67□□□□□ -0.06
MDH1-210ENST00000472098 PBX2P40425 430 aa14.67□□□□□ -0.06
MDH1-210ENST00000472098 TULP1O00294 542 aaPredicted RBP14.64□□□□□ -0.07
MDH1-210ENST00000472098 SMYD5Q6GMV2 418 aa14.61□□□□□ -0.07
MDH1-210ENST00000472098 EVI5O60447 810 aa14.6□□□□□ -0.07
MDH1-210ENST00000472098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.6□□□□□ -0.07
MDH1-210ENST00000472098 MLLT3P42568 568 aaPredicted RBP14.59□□□□□ -0.07
MDH1-210ENST00000472098 LMOD2Q6P5Q4 547 aa14.56□□□□□ -0.08
MDH1-210ENST00000472098 ANO8Q9HCE9 1232 aaPredicted RBP14.55□□□□□ -0.08
MDH1-210ENST00000472098 ADGRD1Q6QNK2 874 aa14.53□□□□□ -0.08
MDH1-210ENST00000472098 TPRNQ4KMQ1 711 aa14.52□□□□□ -0.09
MDH1-210ENST00000472098 ARHGAP33O14559 1287 aa14.51□□□□□ -0.09
MDH1-210ENST00000472098 GRXCR2A6NFK2 248 aa14.49□□□□□ -0.09
MDH1-210ENST00000472098 DMRTA1Q5VZB9 504 aa14.49□□□□□ -0.09
MDH1-210ENST00000472098 HRO43593 1189 aa14.48□□□□□ -0.09
MDH1-210ENST00000472098 DDX12PQ92771 950 aa14.48□□□□□ -0.09
MDH1-210ENST00000472098 PRKCSHP14314 528 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms