RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 FRMPD1Q5SYB0 1578 aa14.51□□□□□ -0.09
SYN3-211ENST00000472027 GPATCH8Q9UKJ3 1502 aaKnown RBP14.48□□□□□ -0.09
SYN3-211ENST00000472027 AFAP1Q8N556 730 aa14.48□□□□□ -0.09
SYN3-211ENST00000472027 ZNF777Q9ULD5 760 aaPredicted RBP14.48□□□□□ -0.09
SYN3-211ENST00000472027 RICTORQ6R327 1708 aa14.48□□□□□ -0.09
SYN3-211ENST00000472027 CDC42BPBQ9Y5S2 1711 aa14.47□□□□□ -0.09
SYN3-211ENST00000472027 POGZQ7Z3K3 1410 aa14.47□□□□□ -0.09
SYN3-211ENST00000472027 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
SYN3-211ENST00000472027 CFDP1Q9UEE9 299 aaPredicted RBP14.46□□□□□ -0.09
SYN3-211ENST00000472027 PREX2Q70Z35 1606 aa14.45□□□□□ -0.1
SYN3-211ENST00000472027 EHBP1L1Q8N3D4 1523 aa14.45□□□□□ -0.1
SYN3-211ENST00000472027 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
SYN3-211ENST00000472027 CDC42BPAQ5VT25 1732 aa14.44□□□□□ -0.1
SYN3-211ENST00000472027 ARID4BQ4LE39 1312 aaPredicted RBP14.43□□□□□ -0.1
SYN3-211ENST00000472027 TIAM1Q13009 1591 aa14.43□□□□□ -0.1
SYN3-211ENST00000472027 YEATS2Q9ULM3 1422 aa14.43□□□□□ -0.1
SYN3-211ENST00000472027 ZMYM4Q5VZL5 1548 aa14.43□□□□□ -0.1
SYN3-211ENST00000472027 KANK4Q5T7N3 995 aaPredicted RBP14.43□□□□□ -0.1
SYN3-211ENST00000472027 MYT1LQ9UL68 1186 aa14.43□□□□□ -0.1
SYN3-211ENST00000472027 ZNF518AQ6AHZ1 1483 aa14.43□□□□□ -0.1
SYN3-211ENST00000472027 ARHGEF12Q9NZN5 1544 aa14.42□□□□□ -0.1
SYN3-211ENST00000472027 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.1
SYN3-211ENST00000472027 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
SYN3-211ENST00000472027 APLP2Q06481 763 aa14.41□□□□□ -0.1
SYN3-211ENST00000472027 LRRC9Q6ZRR7 1453 aa14.41□□□□□ -0.1
SYN3-211ENST00000472027 ABCC1P33527 1531 aa14.41□□□□□ -0.1
SYN3-211ENST00000472027 MAP3K1Q13233 1512 aa14.41□□□□□ -0.1
SYN3-211ENST00000472027 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
SYN3-211ENST00000472027 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
SYN3-211ENST00000472027 ARHGEF40Q8TER5 1519 aa14.39□□□□□ -0.11
SYN3-211ENST00000472027 ZNF644Q9H582 1327 aaPredicted RBP14.39□□□□□ -0.11
SYN3-211ENST00000472027 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
SYN3-211ENST00000472027 KIAA1107Q9UPP5 1409 aa14.38□□□□□ -0.11
SYN3-211ENST00000472027 KDM5CP41229 1560 aa14.38□□□□□ -0.11
SYN3-211ENST00000472027 ATP10AO60312 1499 aa14.38□□□□□ -0.11
SYN3-211ENST00000472027 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
SYN3-211ENST00000472027 PLEKHH2Q8IVE3 1493 aa14.37□□□□□ -0.11
SYN3-211ENST00000472027 MLH3Q9UHC1 1453 aa14.37□□□□□ -0.11
SYN3-211ENST00000472027 ITSN2Q9NZM3 1697 aa14.36□□□□□ -0.11
SYN3-211ENST00000472027 SPAG9O60271 1321 aaKnown RBP14.35□□□□□ -0.11
SYN3-211ENST00000472027 SYCP2Q9BX26 1530 aa14.35□□□□□ -0.11
SYN3-211ENST00000472027 C9orf84Q5VXU9 1444 aa14.34□□□□□ -0.11
SYN3-211ENST00000472027 MLECQ14165 292 aa14.34□□□□□ -0.11
SYN3-211ENST00000472027 HECW2Q9P2P5 1572 aa14.33□□□□□ -0.12
SYN3-211ENST00000472027 ADAMTSL3P82987 1691 aa14.32□□□□□ -0.12
SYN3-211ENST00000472027 BCORL1Q5H9F3 1711 aa14.32□□□□□ -0.12
SYN3-211ENST00000472027 MBD5Q9P267 1494 aa14.31□□□□□ -0.12
SYN3-211ENST00000472027 RSPH4AQ5TD94 716 aa14.31□□□□□ -0.12
SYN3-211ENST00000472027 SIGLEC1Q9BZZ2 1709 aa14.31□□□□□ -0.12
SYN3-211ENST00000472027 DIP2CQ9Y2E4 1556 aa14.3□□□□□ -0.12
SYN3-211ENST00000472027 PTPRMP28827 1452 aa14.29□□□□□ -0.12
SYN3-211ENST00000472027 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
SYN3-211ENST00000472027 CAMSAP2Q08AD1 1489 aa14.28□□□□□ -0.12
SYN3-211ENST00000472027 ABCA6Q8N139 1617 aa14.28□□□□□ -0.12
SYN3-211ENST00000472027 MYOM3Q5VTT5 1437 aa14.27□□□□□ -0.12
SYN3-211ENST00000472027 MADDQ8WXG6 1647 aa14.26□□□□□ -0.13
SYN3-211ENST00000472027 REREQ9P2R6 1566 aa14.26□□□□□ -0.13
SYN3-211ENST00000472027 MIA2Q96PC5 1412 aa14.26□□□□□ -0.13
SYN3-211ENST00000472027 TSPY4P0CV99 314 aa14.25□□□□□ -0.13
SYN3-211ENST00000472027 TSPY10P0CW01 314 aa14.25□□□□□ -0.13
SYN3-211ENST00000472027 ATP7AQ04656 1500 aa14.25□□□□□ -0.13
SYN3-211ENST00000472027 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
SYN3-211ENST00000472027 PLPPR3Q6T4P5 718 aa14.24□□□□□ -0.13
SYN3-211ENST00000472027 AGLP35573 1532 aa14.24□□□□□ -0.13
SYN3-211ENST00000472027 CCDC141Q6ZP82 1450 aa14.24□□□□□ -0.13
SYN3-211ENST00000472027 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
SYN3-211ENST00000472027 A2MP01023 1474 aa14.22□□□□□ -0.13
SYN3-211ENST00000472027 RIMS1Q86UR5 1692 aaKnown RBP14.22□□□□□ -0.13
SYN3-211ENST00000472027 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.13
SYN3-211ENST00000472027 CEBPAP49715 358 aaPredicted RBP14.2□□□□□ -0.14
SYN3-211ENST00000472027 ARHGEF5Q12774 1597 aa14.2□□□□□ -0.14
SYN3-211ENST00000472027 DHX29Q7Z478 1369 aaKnown RBP14.2□□□□□ -0.14
SYN3-211ENST00000472027 GGT6Q6P531 493 aa14.19□□□□□ -0.14
SYN3-211ENST00000472027 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
SYN3-211ENST00000472027 FER1L4A9Z1Z3 1794 aa14.17□□□□□ -0.14
SYN3-211ENST00000472027 PPARGC1BQ86YN6 1023 aaKnown RBP14.17□□□□□ -0.14
SYN3-211ENST00000472027 PLXNC1O60486 1568 aa14.16□□□□□ -0.14
SYN3-211ENST00000472027 PTPN23Q9H3S7 1636 aa14.15□□□□□ -0.14
SYN3-211ENST00000472027 ADGBQ8N7X0 1667 aa14.15□□□□□ -0.14
SYN3-211ENST00000472027 TCOF1Q13428 1488 aaKnown RBP14.15□□□□□ -0.14
SYN3-211ENST00000472027 KIF3BO15066 747 aa14.15□□□□□ -0.14
SYN3-211ENST00000472027 ABCC5O15440 1437 aa14.15□□□□□ -0.14
SYN3-211ENST00000472027 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
SYN3-211ENST00000472027 FAM50AQ14320 339 aaKnown RBP14.13□□□□□ -0.15
SYN3-211ENST00000472027 CNTLNQ9NXG0 1405 aa14.13□□□□□ -0.15
SYN3-211ENST00000472027 MAST1Q9Y2H9 1570 aa14.13□□□□□ -0.15
SYN3-211ENST00000472027 DAPK1P53355 1430 aa14.12□□□□□ -0.15
SYN3-211ENST00000472027 ZMYM3Q14202 1370 aa14.11□□□□□ -0.15
SYN3-211ENST00000472027 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
SYN3-211ENST00000472027 CHIC2Q9UKJ5 165 aa14.11□□□□□ -0.15
SYN3-211ENST00000472027 LMTK3Q96Q04 1460 aa14.09□□□□□ -0.15
SYN3-211ENST00000472027 SHANK2Q9UPX8 1470 aa14.08□□□□□ -0.16
SYN3-211ENST00000472027 HSPA2P54652 639 aa14.08□□□□□ -0.16
SYN3-211ENST00000472027 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
SYN3-211ENST00000472027 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
SYN3-211ENST00000472027 C3P01024 1663 aa14.07□□□□□ -0.16
SYN3-211ENST00000472027 KIF15Q9NS87 1388 aa14.07□□□□□ -0.16
SYN3-211ENST00000472027 ANKRD30AQ9BXX3 1397 aa14.06□□□□□ -0.16
SYN3-211ENST00000472027 CLTCQ00610 1675 aaKnown RBP14.05□□□□□ -0.16
SYN3-211ENST00000472027 DUOX2Q9NRD8 1548 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms