RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 PREX2Q70Z35 1606 aa28.98■■■□□ 2.23
SNX4-203ENST00000471751 CD109Q6YHK3 1445 aa28.95■■■□□ 2.23
SNX4-203ENST00000471751 TCOF1Q13428 1488 aaKnown RBP28.95■■■□□ 2.22
SNX4-203ENST00000471751 EFCAB2Q5VUJ9 269 aa28.94■■■□□ 2.22
SNX4-203ENST00000471751 KIF13AQ9H1H9 1805 aa28.93■■■□□ 2.22
SNX4-203ENST00000471751 CDC42BPBQ9Y5S2 1711 aa28.93■■■□□ 2.22
SNX4-203ENST00000471751 MAP3K4Q9Y6R4 1608 aa28.92■■■□□ 2.22
SNX4-203ENST00000471751 RSPH4AQ5TD94 716 aa28.9■■■□□ 2.22
SNX4-203ENST00000471751 PLEKHH2Q8IVE3 1493 aa28.9■■■□□ 2.22
SNX4-203ENST00000471751 PTPN23Q9H3S7 1636 aa28.89■■■□□ 2.22
SNX4-203ENST00000471751 ARHGAP5Q13017 1502 aa28.87■■■□□ 2.21
SNX4-203ENST00000471751 KIAA1107Q9UPP5 1409 aa28.86■■■□□ 2.21
SNX4-203ENST00000471751 AEBP2Q6ZN18 517 aaPredicted RBP28.86■■■□□ 2.21
SNX4-203ENST00000471751 CFAP74Q9C0B2 1584 aa28.85■■■□□ 2.21
SNX4-203ENST00000471751 NEO1Q92859 1461 aa28.83■■■□□ 2.21
SNX4-203ENST00000471751 FANCAO15360 1455 aa28.82■■■□□ 2.2
SNX4-203ENST00000471751 TEX14Q8IWB6 1497 aa28.81■■■□□ 2.2
SNX4-203ENST00000471751 CAMSAP2Q08AD1 1489 aa28.8■■■□□ 2.2
SNX4-203ENST00000471751 FAM50AQ14320 339 aaKnown RBP28.78■■■□□ 2.2
SNX4-203ENST00000471751 ZNF777Q9ULD5 760 aaPredicted RBP28.76■■■□□ 2.19
SNX4-203ENST00000471751 SAMD9LQ8IVG5 1584 aa28.76■■■□□ 2.19
SNX4-203ENST00000471751 ARHGEF5Q12774 1597 aa28.74■■■□□ 2.19
SNX4-203ENST00000471751 AKNAQ7Z591 1439 aa28.74■■■□□ 2.19
SNX4-203ENST00000471751 ZNF644Q9H582 1327 aaPredicted RBP28.72■■■□□ 2.19
SNX4-203ENST00000471751 MBD5Q9P267 1494 aa28.71■■■□□ 2.19
SNX4-203ENST00000471751 ABCC1P33527 1531 aa28.71■■■□□ 2.19
SNX4-203ENST00000471751 DNMT1P26358 1616 aaKnown RBP28.7■■■□□ 2.18
SNX4-203ENST00000471751 TSPOAP1O95153 1857 aa28.69■■■□□ 2.18
SNX4-203ENST00000471751 ADGRL1O94910 1474 aa28.68■■■□□ 2.18
SNX4-203ENST00000471751 PPRC1Q5VV67 1664 aaKnown RBP28.68■■■□□ 2.18
SNX4-203ENST00000471751 DAPK1P53355 1430 aa28.66■■■□□ 2.18
SNX4-203ENST00000471751 KDM6BO15054 1643 aa28.66■■■□□ 2.18
SNX4-203ENST00000471751 CCDC141Q6ZP82 1450 aa28.65■■■□□ 2.18
SNX4-203ENST00000471751 SHANK2Q9UPX8 1470 aa28.65■■■□□ 2.18
SNX4-203ENST00000471751 TSPY4P0CV99 314 aa28.65■■■□□ 2.18
SNX4-203ENST00000471751 TSPY10P0CW01 314 aa28.65■■■□□ 2.18
SNX4-203ENST00000471751 ABCC5O15440 1437 aa28.64■■■□□ 2.18
SNX4-203ENST00000471751 SCAPERQ9BY12 1400 aa28.64■■■□□ 2.17
SNX4-203ENST00000471751 HNRNPMP52272 730 aaKnown RBP eCLIP28.63■■■□□ 2.17
SNX4-203ENST00000471751 SYCP2Q9BX26 1530 aa28.62■■■□□ 2.17
SNX4-203ENST00000471751 ARHGEF12Q9NZN5 1544 aa28.61■■■□□ 2.17
SNX4-203ENST00000471751 ROCK1Q13464 1354 aa28.61■■■□□ 2.17
SNX4-203ENST00000471751 PCGF6Q9BYE7 350 aa28.6■■■□□ 2.17
SNX4-203ENST00000471751 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
SNX4-203ENST00000471751 RTEL1-TNFRSF6BF6WH68 1400 aa28.58■■■□□ 2.17
SNX4-203ENST00000471751 DENND4BO75064 1496 aaPredicted RBP28.58■■■□□ 2.17
SNX4-203ENST00000471751 MAST1Q9Y2H9 1570 aa28.57■■■□□ 2.16
SNX4-203ENST00000471751 CROCC2H7BZ55 1655 aa28.57■■■□□ 2.16
SNX4-203ENST00000471751 COL17A1Q9UMD9 1497 aaPredicted RBP28.56■■■□□ 2.16
SNX4-203ENST00000471751 ADGRL2O95490 1459 aa28.55■■■□□ 2.16
SNX4-203ENST00000471751 POGZQ7Z3K3 1410 aa28.54■■■□□ 2.16
SNX4-203ENST00000471751 TRAPPC8Q9Y2L5 1435 aa28.54■■■□□ 2.16
SNX4-203ENST00000471751 ACIN1Q9UKV3 1341 aaKnown RBP28.54■■■□□ 2.16
SNX4-203ENST00000471751 PTPRKQ15262 1439 aa28.53■■■□□ 2.16
SNX4-203ENST00000471751 C9orf84Q5VXU9 1444 aa28.52■■■□□ 2.16
SNX4-203ENST00000471751 ITGAEP38570 1179 aa28.51■■■□□ 2.15
SNX4-203ENST00000471751 KDM5CP41229 1560 aa28.51■■■□□ 2.15
SNX4-203ENST00000471751 ANKRD30AQ9BXX3 1397 aa28.51■■■□□ 2.15
SNX4-203ENST00000471751 HRCP23327 699 aa28.49■■■□□ 2.15
SNX4-203ENST00000471751 NCOA1Q15788 1441 aa28.49■■■□□ 2.15
SNX4-203ENST00000471751 MLH3Q9UHC1 1453 aa28.49■■■□□ 2.15
SNX4-203ENST00000471751 AFAP1Q8N556 730 aa28.48■■■□□ 2.15
SNX4-203ENST00000471751 SPAG9O60271 1321 aaKnown RBP28.48■■■□□ 2.15
SNX4-203ENST00000471751 ADGBQ8N7X0 1667 aa28.48■■■□□ 2.15
SNX4-203ENST00000471751 HFM1A2PYH4 1435 aa28.47■■■□□ 2.15
SNX4-203ENST00000471751 RICTORQ6R327 1708 aa28.46■■■□□ 2.15
SNX4-203ENST00000471751 MAGI2Q86UL8 1455 aa28.46■■■□□ 2.15
SNX4-203ENST00000471751 PLXNC1O60486 1568 aa28.43■■■□□ 2.14
SNX4-203ENST00000471751 ZMYM4Q5VZL5 1548 aa28.42■■■□□ 2.14
SNX4-203ENST00000471751 KDM4FA0A1W2PPD8 638 aa28.42■■■□□ 2.14
SNX4-203ENST00000471751 CHIC2Q9UKJ5 165 aa28.42■■■□□ 2.14
SNX4-203ENST00000471751 INO80Q9ULG1 1556 aaPredicted RBP28.4■■■□□ 2.14
SNX4-203ENST00000471751 SETD5Q9C0A6 1442 aa28.39■■■□□ 2.14
SNX4-203ENST00000471751 ATP7AQ04656 1500 aa28.39■■■□□ 2.14
SNX4-203ENST00000471751 RAPGEF3O95398 923 aa28.39■■■□□ 2.13
SNX4-203ENST00000471751 NAIPQ13075 1403 aa28.39■■■□□ 2.13
SNX4-203ENST00000471751 ZFYVE16Q7Z3T8 1539 aa28.38■■■□□ 2.13
SNX4-203ENST00000471751 HECW2Q9P2P5 1572 aa28.38■■■□□ 2.13
SNX4-203ENST00000471751 FRMPD1Q5SYB0 1578 aa28.35■■■□□ 2.13
SNX4-203ENST00000471751 GCC2Q8IWJ2 1684 aa28.35■■■□□ 2.13
SNX4-203ENST00000471751 KIDINS220Q9ULH0 1771 aa28.35■■■□□ 2.13
SNX4-203ENST00000471751 KIF15Q9NS87 1388 aa28.34■■■□□ 2.13
SNX4-203ENST00000471751 DUOX2Q9NRD8 1548 aa28.34■■■□□ 2.13
SNX4-203ENST00000471751 RRP7BPQ9NSQ0 103 aa28.32■■■□□ 2.12
SNX4-203ENST00000471751 ERBINQ96RT1 1412 aa28.29■■■□□ 2.12
SNX4-203ENST00000471751 ANKRD50Q9ULJ7 1429 aa28.29■■■□□ 2.12
SNX4-203ENST00000471751 MYT1LQ9UL68 1186 aa28.28■■■□□ 2.12
SNX4-203ENST00000471751 DHX29Q7Z478 1369 aaKnown RBP28.28■■■□□ 2.12
SNX4-203ENST00000471751 RAB3GAP2Q9H2M9 1393 aa28.25■■■□□ 2.11
SNX4-203ENST00000471751 REREQ9P2R6 1566 aa28.23■■■□□ 2.11
SNX4-203ENST00000471751 ATP10AO60312 1499 aa28.21■■■□□ 2.11
SNX4-203ENST00000471751 A2MP01023 1474 aa28.21■■■□□ 2.11
SNX4-203ENST00000471751 EIF2AK4Q9P2K8 1649 aaKnown RBP28.2■■■□□ 2.1
SNX4-203ENST00000471751 DIP2CQ9Y2E4 1556 aa28.2■■■□□ 2.1
SNX4-203ENST00000471751 ABCA6Q8N139 1617 aa28.18■■■□□ 2.1
SNX4-203ENST00000471751 BCORL1Q5H9F3 1711 aa28.17■■■□□ 2.1
SNX4-203ENST00000471751 YEATS2Q9ULM3 1422 aa28.15■■■□□ 2.1
SNX4-203ENST00000471751 ARHGEF40Q8TER5 1519 aa28.15■■■□□ 2.1
SNX4-203ENST00000471751 AGLP35573 1532 aa28.13■■■□□ 2.09
SNX4-203ENST00000471751 PPP6R1Q9UPN7 881 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms