RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 KANK4Q5T7N3 995 aaPredicted RBP21.88■■□□□ 1.09
SSR4-207ENST00000471724 NEO1Q92859 1461 aa21.88■■□□□ 1.09
SSR4-207ENST00000471724 FANCAO15360 1455 aa21.87■■□□□ 1.09
SSR4-207ENST00000471724 GPATCH8Q9UKJ3 1502 aaKnown RBP21.85■■□□□ 1.09
SSR4-207ENST00000471724 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.08
SSR4-207ENST00000471724 MYOM3Q5VTT5 1437 aa21.81■■□□□ 1.08
SSR4-207ENST00000471724 SAMD9LQ8IVG5 1584 aa21.79■■□□□ 1.08
SSR4-207ENST00000471724 ABCC1P33527 1531 aa21.79■■□□□ 1.08
SSR4-207ENST00000471724 COL17A1Q9UMD9 1497 aaPredicted RBP21.78■■□□□ 1.08
SSR4-207ENST00000471724 EFCAB2Q5VUJ9 269 aa21.77■■□□□ 1.08
SSR4-207ENST00000471724 ADGRL1O94910 1474 aa21.77■■□□□ 1.07
SSR4-207ENST00000471724 PLEKHH2Q8IVE3 1493 aa21.77■■□□□ 1.07
SSR4-207ENST00000471724 AKNAQ7Z591 1439 aa21.76■■□□□ 1.07
SSR4-207ENST00000471724 MIA2Q96PC5 1412 aa21.76■■□□□ 1.07
SSR4-207ENST00000471724 CFDP1Q9UEE9 299 aaPredicted RBP21.74■■□□□ 1.07
SSR4-207ENST00000471724 RICTORQ6R327 1708 aa21.74■■□□□ 1.07
SSR4-207ENST00000471724 CAMSAP2Q08AD1 1489 aa21.73■■□□□ 1.07
SSR4-207ENST00000471724 PTPN23Q9H3S7 1636 aa21.73■■□□□ 1.07
SSR4-207ENST00000471724 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
SSR4-207ENST00000471724 SYCP2Q9BX26 1530 aa21.71■■□□□ 1.07
SSR4-207ENST00000471724 FRMPD1Q5SYB0 1578 aa21.7■■□□□ 1.06
SSR4-207ENST00000471724 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
SSR4-207ENST00000471724 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
SSR4-207ENST00000471724 KIAA1107Q9UPP5 1409 aa21.68■■□□□ 1.06
SSR4-207ENST00000471724 ZNF518AQ6AHZ1 1483 aa21.67■■□□□ 1.06
SSR4-207ENST00000471724 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
SSR4-207ENST00000471724 AEBP2Q6ZN18 517 aaPredicted RBP21.67■■□□□ 1.06
SSR4-207ENST00000471724 ARHGEF5Q12774 1597 aa21.66■■□□□ 1.06
SSR4-207ENST00000471724 ZMYM4Q5VZL5 1548 aa21.66■■□□□ 1.06
SSR4-207ENST00000471724 TCOF1Q13428 1488 aaKnown RBP21.66■■□□□ 1.06
SSR4-207ENST00000471724 KDM5CP41229 1560 aa21.65■■□□□ 1.06
SSR4-207ENST00000471724 ZNF777Q9ULD5 760 aaPredicted RBP21.65■■□□□ 1.06
SSR4-207ENST00000471724 PPARGC1BQ86YN6 1023 aaKnown RBP21.64■■□□□ 1.05
SSR4-207ENST00000471724 CROCC2H7BZ55 1655 aa21.63■■□□□ 1.05
SSR4-207ENST00000471724 HECW2Q9P2P5 1572 aa21.62■■□□□ 1.05
SSR4-207ENST00000471724 ARHGEF12Q9NZN5 1544 aa21.62■■□□□ 1.05
SSR4-207ENST00000471724 DNMT1P26358 1616 aaKnown RBP21.61■■□□□ 1.05
SSR4-207ENST00000471724 CCDC141Q6ZP82 1450 aa21.6■■□□□ 1.05
SSR4-207ENST00000471724 MBD5Q9P267 1494 aa21.58■■□□□ 1.05
SSR4-207ENST00000471724 INO80Q9ULG1 1556 aaPredicted RBP21.58■■□□□ 1.05
SSR4-207ENST00000471724 RRBP1Q9P2E9 1410 aaKnown RBP21.58■■□□□ 1.05
SSR4-207ENST00000471724 ZNF644Q9H582 1327 aaPredicted RBP21.57■■□□□ 1.04
SSR4-207ENST00000471724 TRAPPC8Q9Y2L5 1435 aa21.57■■□□□ 1.04
SSR4-207ENST00000471724 ARHGEF40Q8TER5 1519 aa21.57■■□□□ 1.04
SSR4-207ENST00000471724 RAPGEF3O95398 923 aa21.57■■□□□ 1.04
SSR4-207ENST00000471724 MAGI2Q86UL8 1455 aa21.57■■□□□ 1.04
SSR4-207ENST00000471724 MAST1Q9Y2H9 1570 aa21.55■■□□□ 1.04
SSR4-207ENST00000471724 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
SSR4-207ENST00000471724 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
SSR4-207ENST00000471724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.54■■□□□ 1.046e-8■■□□□ 11.8
SSR4-207ENST00000471724 ATP7AQ04656 1500 aa21.54■■□□□ 1.04
SSR4-207ENST00000471724 RSPH4AQ5TD94 716 aa21.53■■□□□ 1.04
SSR4-207ENST00000471724 KIDINS220Q9ULH0 1771 aa21.53■■□□□ 1.04
SSR4-207ENST00000471724 ADGBQ8N7X0 1667 aa21.53■■□□□ 1.04
SSR4-207ENST00000471724 MLH3Q9UHC1 1453 aa21.52■■□□□ 1.04
SSR4-207ENST00000471724 HNRNPMP52272 730 aaKnown RBP eCLIP21.52■■□□□ 1.04
SSR4-207ENST00000471724 KDM4FA0A1W2PPD8 638 aa21.51■■□□□ 1.03
SSR4-207ENST00000471724 DAPK1P53355 1430 aa21.5■■□□□ 1.03
SSR4-207ENST00000471724 ABCA6Q8N139 1617 aa21.5■■□□□ 1.03
SSR4-207ENST00000471724 PLXNC1O60486 1568 aa21.49■■□□□ 1.03
SSR4-207ENST00000471724 FAM50AQ14320 339 aaKnown RBP21.49■■□□□ 1.03
SSR4-207ENST00000471724 DIP2CQ9Y2E4 1556 aa21.48■■□□□ 1.03
SSR4-207ENST00000471724 AFAP1Q8N556 730 aa21.48■■□□□ 1.03
SSR4-207ENST00000471724 RTEL1-TNFRSF6BF6WH68 1400 aa21.47■■□□□ 1.03
SSR4-207ENST00000471724 SPAG9O60271 1321 aaKnown RBP21.47■■□□□ 1.03
SSR4-207ENST00000471724 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
SSR4-207ENST00000471724 ABCC5O15440 1437 aa21.46■■□□□ 1.03
SSR4-207ENST00000471724 REREQ9P2R6 1566 aa21.45■■□□□ 1.02
SSR4-207ENST00000471724 YEATS2Q9ULM3 1422 aa21.43■■□□□ 1.02
SSR4-207ENST00000471724 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
SSR4-207ENST00000471724 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
SSR4-207ENST00000471724 MYT1LQ9UL68 1186 aa21.41■■□□□ 1.02
SSR4-207ENST00000471724 ADGRL2O95490 1459 aa21.4■■□□□ 1.02
SSR4-207ENST00000471724 ATP10AO60312 1499 aa21.39■■□□□ 1.02
SSR4-207ENST00000471724 ARID4BQ4LE39 1312 aaPredicted RBP21.35■■□□□ 1.01
SSR4-207ENST00000471724 EIF2AK4Q9P2K8 1649 aaKnown RBP21.35■■□□□ 1.01
SSR4-207ENST00000471724 ANKRD30AQ9BXX3 1397 aa21.35■■□□□ 1.01
SSR4-207ENST00000471724 DUOX2Q9NRD8 1548 aa21.34■■□□□ 1.01
SSR4-207ENST00000471724 A2MP01023 1474 aa21.34■■□□□ 1.01
SSR4-207ENST00000471724 BCORL1Q5H9F3 1711 aa21.34■■□□□ 1.01
SSR4-207ENST00000471724 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
SSR4-207ENST00000471724 SIGLEC1Q9BZZ2 1709 aa21.33■■□□□ 1.01
SSR4-207ENST00000471724 AGLP35573 1532 aa21.33■■□□□ 1
SSR4-207ENST00000471724 ROCK1Q13464 1354 aa21.33■■□□□ 1
SSR4-207ENST00000471724 PTPRKQ15262 1439 aa21.31■■□□□ 1
SSR4-207ENST00000471724 KIF15Q9NS87 1388 aa21.31■■□□□ 1
SSR4-207ENST00000471724 NCOA1Q15788 1441 aa21.3■■□□□ 1
SSR4-207ENST00000471724 ADAMTSL3P82987 1691 aa21.3■■□□□ 1
SSR4-207ENST00000471724 ERBINQ96RT1 1412 aa21.29■■□□□ 1
SSR4-207ENST00000471724 ITGAEP38570 1179 aa21.28■■□□□ 1
SSR4-207ENST00000471724 DHX29Q7Z478 1369 aaKnown RBP21.26■□□□□ 0.99
SSR4-207ENST00000471724 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
SSR4-207ENST00000471724 RNF17Q9BXT8 1623 aaKnown RBP21.26■□□□□ 0.99
SSR4-207ENST00000471724 DEPDC5O75140 1603 aa21.22■□□□□ 0.99
SSR4-207ENST00000471724 FER1L4A9Z1Z3 1794 aa21.22■□□□□ 0.99
SSR4-207ENST00000471724 MADDQ8WXG6 1647 aa21.22■□□□□ 0.99
SSR4-207ENST00000471724 HFM1A2PYH4 1435 aa21.21■□□□□ 0.99
SSR4-207ENST00000471724 FAM135AQ9P2D6 1515 aa21.21■□□□□ 0.99
SSR4-207ENST00000471724 RRP7BPQ9NSQ0 103 aa21.2■□□□□ 0.98
SSR4-207ENST00000471724 ANKRD50Q9ULJ7 1429 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms