RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 POGZQ7Z3K3 1410 aa24.17■■□□□ 1.46
VPS8-221ENST00000471655 ADAMTSL3P82987 1691 aa24.15■■□□□ 1.46
VPS8-221ENST00000471655 ARHGAP5Q13017 1502 aa24.14■■□□□ 1.45
VPS8-221ENST00000471655 ZFYVE16Q7Z3T8 1539 aa24.13■■□□□ 1.45
VPS8-221ENST00000471655 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
VPS8-221ENST00000471655 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
VPS8-221ENST00000471655 YEATS2Q9ULM3 1422 aa24.1■■□□□ 1.45
VPS8-221ENST00000471655 CDC42BPBQ9Y5S2 1711 aa24.1■■□□□ 1.45
VPS8-221ENST00000471655 CEP162Q5TB80 1403 aa24.1■■□□□ 1.45
VPS8-221ENST00000471655 PREX2Q70Z35 1606 aa24.09■■□□□ 1.45
VPS8-221ENST00000471655 ZNF518AQ6AHZ1 1483 aa24.08■■□□□ 1.45
VPS8-221ENST00000471655 PTPRMP28827 1452 aa24.06■■□□□ 1.44
VPS8-221ENST00000471655 KDM5CP41229 1560 aa24.05■■□□□ 1.44
VPS8-221ENST00000471655 ATP10AO60312 1499 aa24.03■■□□□ 1.44
VPS8-221ENST00000471655 AFAP1Q8N556 730 aa24.03■■□□□ 1.44
VPS8-221ENST00000471655 CDC42BPAQ5VT25 1732 aa24.03■■□□□ 1.44
VPS8-221ENST00000471655 MADDQ8WXG6 1647 aa24.01■■□□□ 1.43
VPS8-221ENST00000471655 ABCC1P33527 1531 aa24■■□□□ 1.43
VPS8-221ENST00000471655 HECW2Q9P2P5 1572 aa24■■□□□ 1.43
VPS8-221ENST00000471655 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
VPS8-221ENST00000471655 SIGLEC1Q9BZZ2 1709 aa23.99■■□□□ 1.43
VPS8-221ENST00000471655 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
VPS8-221ENST00000471655 C9orf84Q5VXU9 1444 aa23.99■■□□□ 1.43
VPS8-221ENST00000471655 ARHGEF12Q9NZN5 1544 aa23.99■■□□□ 1.43
VPS8-221ENST00000471655 MLH3Q9UHC1 1453 aa23.98■■□□□ 1.43
VPS8-221ENST00000471655 LOC105371045A0A1W2PR82 267 aa23.97■■□□□ 1.43
VPS8-221ENST00000471655 TRAPPC8Q9Y2L5 1435 aa23.96■■□□□ 1.43
VPS8-221ENST00000471655 ITSN2Q9NZM3 1697 aa23.95■■□□□ 1.43
VPS8-221ENST00000471655 CCNB3Q8WWL7 1395 aa23.93■■□□□ 1.42
VPS8-221ENST00000471655 REREQ9P2R6 1566 aa23.92■■□□□ 1.42
VPS8-221ENST00000471655 EHBP1L1Q8N3D4 1523 aa23.92■■□□□ 1.42
VPS8-221ENST00000471655 RIMS1Q86UR5 1692 aaKnown RBP23.92■■□□□ 1.42
VPS8-221ENST00000471655 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
VPS8-221ENST00000471655 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
VPS8-221ENST00000471655 KIAA1107Q9UPP5 1409 aa23.91■■□□□ 1.42
VPS8-221ENST00000471655 DIP2CQ9Y2E4 1556 aa23.91■■□□□ 1.42
VPS8-221ENST00000471655 MYT1LQ9UL68 1186 aa23.9■■□□□ 1.42
VPS8-221ENST00000471655 ZNF777Q9ULD5 760 aaPredicted RBP23.9■■□□□ 1.42
VPS8-221ENST00000471655 PLEKHH2Q8IVE3 1493 aa23.89■■□□□ 1.42
VPS8-221ENST00000471655 MLECQ14165 292 aa23.88■■□□□ 1.41
VPS8-221ENST00000471655 ABCA6Q8N139 1617 aa23.87■■□□□ 1.41
VPS8-221ENST00000471655 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
VPS8-221ENST00000471655 SYCP2Q9BX26 1530 aa23.85■■□□□ 1.41
VPS8-221ENST00000471655 KIDINS220Q9ULH0 1771 aa23.85■■□□□ 1.41
VPS8-221ENST00000471655 AGLP35573 1532 aa23.84■■□□□ 1.41
VPS8-221ENST00000471655 FER1L4A9Z1Z3 1794 aa23.84■■□□□ 1.41
VPS8-221ENST00000471655 TIAM1Q13009 1591 aa23.84■■□□□ 1.41
VPS8-221ENST00000471655 HNRNPMP52272 730 aaKnown RBP eCLIP23.84■■□□□ 1.41
VPS8-221ENST00000471655 SPAG9O60271 1321 aaKnown RBP23.81■■□□□ 1.4
VPS8-221ENST00000471655 LMTK3Q96Q04 1460 aa23.78■■□□□ 1.4
VPS8-221ENST00000471655 SUPT6HQ7KZ85 1726 aaKnown RBP23.78■■□□□ 1.4
VPS8-221ENST00000471655 NCOA2Q15596 1464 aa23.77■■□□□ 1.4
VPS8-221ENST00000471655 MAP3K1Q13233 1512 aa23.77■■□□□ 1.4
VPS8-221ENST00000471655 ZNF644Q9H582 1327 aaPredicted RBP23.75■■□□□ 1.39
VPS8-221ENST00000471655 MBD5Q9P267 1494 aa23.75■■□□□ 1.39
VPS8-221ENST00000471655 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
VPS8-221ENST00000471655 INO80Q9ULG1 1556 aaPredicted RBP23.74■■□□□ 1.39
VPS8-221ENST00000471655 LRRC9Q6ZRR7 1453 aa23.74■■□□□ 1.39
VPS8-221ENST00000471655 PLPPR3Q6T4P5 718 aa23.71■■□□□ 1.39
VPS8-221ENST00000471655 RSPH4AQ5TD94 716 aa23.7■■□□□ 1.38
VPS8-221ENST00000471655 RTEL1-TNFRSF6BF6WH68 1400 aa23.69■■□□□ 1.38
VPS8-221ENST00000471655 CEBPAP49715 358 aaPredicted RBP23.68■■□□□ 1.38
VPS8-221ENST00000471655 A2MP01023 1474 aa23.68■■□□□ 1.38
VPS8-221ENST00000471655 PLXNC1O60486 1568 aa23.67■■□□□ 1.38
VPS8-221ENST00000471655 ESF1Q9H501 851 aaKnown RBP23.67■■□□□ 1.38
VPS8-221ENST00000471655 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
VPS8-221ENST00000471655 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
VPS8-221ENST00000471655 KANK4Q5T7N3 995 aaPredicted RBP23.64■■□□□ 1.37
VPS8-221ENST00000471655 SETD1BQ9UPS6 1966 aaKnown RBP23.63■■□□□ 1.37
VPS8-221ENST00000471655 ADGBQ8N7X0 1667 aa23.63■■□□□ 1.37
VPS8-221ENST00000471655 PREX1Q8TCU6 1659 aa23.63■■□□□ 1.37
VPS8-221ENST00000471655 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
VPS8-221ENST00000471655 C3P01024 1663 aa23.61■■□□□ 1.37
VPS8-221ENST00000471655 HSPA2P54652 639 aa23.61■■□□□ 1.37
VPS8-221ENST00000471655 PPP6R1Q9UPN7 881 aa23.6■■□□□ 1.37
VPS8-221ENST00000471655 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
VPS8-221ENST00000471655 MROH2AA6NES4 1674 aa23.58■■□□□ 1.37
VPS8-221ENST00000471655 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.37
VPS8-221ENST00000471655 MIA2Q96PC5 1412 aa23.58■■□□□ 1.36
VPS8-221ENST00000471655 UHRF1BP1Q6BDS2 1440 aa23.57■■□□□ 1.36
VPS8-221ENST00000471655 APLP2Q06481 763 aa23.56■■□□□ 1.36
VPS8-221ENST00000471655 MYOM3Q5VTT5 1437 aa23.56■■□□□ 1.36
VPS8-221ENST00000471655 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
VPS8-221ENST00000471655 TSPY4P0CV99 314 aa23.54■■□□□ 1.36
VPS8-221ENST00000471655 TSPY10P0CW01 314 aa23.54■■□□□ 1.36
VPS8-221ENST00000471655 GGT6Q6P531 493 aa23.53■■□□□ 1.36
VPS8-221ENST00000471655 NPATQ14207 1427 aa23.52■■□□□ 1.36
VPS8-221ENST00000471655 ILDR1Q86SU0 546 aaPredicted RBP23.52■■□□□ 1.36
VPS8-221ENST00000471655 MAST1Q9Y2H9 1570 aa23.48■■□□□ 1.35
VPS8-221ENST00000471655 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
VPS8-221ENST00000471655 KIF3BO15066 747 aa23.45■■□□□ 1.34
VPS8-221ENST00000471655 FAM135AQ9P2D6 1515 aa23.44■■□□□ 1.34
VPS8-221ENST00000471655 DMRT2Q9Y5R5 561 aa23.44■■□□□ 1.34
VPS8-221ENST00000471655 PTPRKQ15262 1439 aa23.43■■□□□ 1.34
VPS8-221ENST00000471655 STRCQ7RTU9 1775 aa23.42■■□□□ 1.34
VPS8-221ENST00000471655 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
VPS8-221ENST00000471655 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
VPS8-221ENST00000471655 FGD6Q6ZV73 1430 aa23.37■■□□□ 1.33
VPS8-221ENST00000471655 FBXO41Q8TF61 875 aa23.37■■□□□ 1.33
VPS8-221ENST00000471655 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms