RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
RBM39-228ENST00000471635 ARSIQ5FYB1 569 aa12.49□□□□□ -0.41
RBM39-228ENST00000471635 SOX12O15370 315 aa12.48□□□□□ -0.41
RBM39-228ENST00000471635 PBX2P40425 430 aa12.46□□□□□ -0.41
RBM39-228ENST00000471635 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
RBM39-228ENST00000471635 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
RBM39-228ENST00000471635 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
RBM39-228ENST00000471635 KHSRPQ92945 711 aaKnown RBP eCLIP12.37□□□□□ -0.436e-9■■□□□ 11.4
RBM39-228ENST00000471635 PHF8Q9UPP1 1060 aa12.36□□□□□ -0.43
RBM39-228ENST00000471635 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
RBM39-228ENST00000471635 NUDT7P0C024 238 aa12.29□□□□□ -0.44
RBM39-228ENST00000471635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
RBM39-228ENST00000471635 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
RBM39-228ENST00000471635 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
RBM39-228ENST00000471635 NLRP6P59044 892 aa12.27□□□□□ -0.45
RBM39-228ENST00000471635 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
RBM39-228ENST00000471635 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
RBM39-228ENST00000471635 LHX6Q9UPM6 363 aa12.25□□□□□ -0.45
RBM39-228ENST00000471635 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
RBM39-228ENST00000471635 KIF3CO14782 793 aa12.23□□□□□ -0.45
RBM39-228ENST00000471635 SLC34A2O95436 690 aa12.22□□□□□ -0.45
RBM39-228ENST00000471635 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
RBM39-228ENST00000471635 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
RBM39-228ENST00000471635 ARHGAP33O14559 1287 aa12.2□□□□□ -0.46
RBM39-228ENST00000471635 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
RBM39-228ENST00000471635 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
RBM39-228ENST00000471635 C2orf72A6NCS6 295 aa12.19□□□□□ -0.46
RBM39-228ENST00000471635 TK2O00142 265 aa12.17□□□□□ -0.46
RBM39-228ENST00000471635 TAOK2Q9UL54 1235 aa12.12□□□□□ -0.47
RBM39-228ENST00000471635 HRO43593 1189 aa12.11□□□□□ -0.47
RBM39-228ENST00000471635 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
RBM39-228ENST00000471635 RGS20O76081 388 aa12.1□□□□□ -0.47
RBM39-228ENST00000471635 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
RBM39-228ENST00000471635 PKD2Q13563 968 aa12.08□□□□□ -0.48
RBM39-228ENST00000471635 TMC2Q8TDI7 906 aa12.08□□□□□ -0.48
RBM39-228ENST00000471635 MFRPQ9BY79 579 aa12.08□□□□□ -0.48
RBM39-228ENST00000471635 KCTD12Q96CX2 325 aaKnown RBP12.07□□□□□ -0.48
RBM39-228ENST00000471635 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
RBM39-228ENST00000471635 DMRTA1Q5VZB9 504 aa12.03□□□□□ -0.48
RBM39-228ENST00000471635 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
RBM39-228ENST00000471635 PSEN2P49810 448 aa12.02□□□□□ -0.49
RBM39-228ENST00000471635 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
RBM39-228ENST00000471635 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
RBM39-228ENST00000471635 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
RBM39-228ENST00000471635 RGL2O15211 777 aa11.99□□□□□ -0.49
RBM39-228ENST00000471635 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
RBM39-228ENST00000471635 KCNH8Q96L42 1107 aa11.98□□□□□ -0.49
RBM39-228ENST00000471635 PTCD2Q8WV60 388 aaKnown RBP11.97□□□□□ -0.49
RBM39-228ENST00000471635 STK25O00506 426 aa11.94□□□□□ -0.5
RBM39-228ENST00000471635 PTPN5P54829 565 aa11.91□□□□□ -0.5
RBM39-228ENST00000471635 A0A0G2JS52 829 aa11.9□□□□□ -0.5
RBM39-228ENST00000471635 KCNK17Q96T54 332 aa11.9□□□□□ -0.5
RBM39-228ENST00000471635 VPS9D1Q9Y2B5 631 aa11.88□□□□□ -0.51
RBM39-228ENST00000471635 TBC1D12O60347 775 aa11.86□□□□□ -0.51
RBM39-228ENST00000471635 FOXK1P85037 733 aa11.84□□□□□ -0.51
RBM39-228ENST00000471635 THSD4Q6ZMP0 1018 aa11.84□□□□□ -0.51
RBM39-228ENST00000471635 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
RBM39-228ENST00000471635 PLPP6Q8IY26 295 aa11.81□□□□□ -0.52
RBM39-228ENST00000471635 GOLGA8CPA6NN73 597 aa11.77□□□□□ -0.53
RBM39-228ENST00000471635 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
RBM39-228ENST00000471635 PPP1R37O75864 691 aa11.76□□□□□ -0.53
RBM39-228ENST00000471635 WNT2BQ93097 391 aa11.76□□□□□ -0.53
RBM39-228ENST00000471635 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
RBM39-228ENST00000471635 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
RBM39-228ENST00000471635 MRPL50Q8N5N7 158 aaKnown RBP11.73□□□□□ -0.53
RBM39-228ENST00000471635 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
RBM39-228ENST00000471635 DSG2Q14126 1118 aa11.72□□□□□ -0.53
RBM39-228ENST00000471635 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
RBM39-228ENST00000471635 Q6ZNB5 142 aa11.71□□□□□ -0.53
RBM39-228ENST00000471635 HS6ST3Q8IZP7 471 aa11.71□□□□□ -0.53
RBM39-228ENST00000471635 PTPREP23469 700 aa11.7□□□□□ -0.54
RBM39-228ENST00000471635 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
RBM39-228ENST00000471635 ZBED2Q9BTP6 218 aa11.68□□□□□ -0.54
RBM39-228ENST00000471635 ITGBL1O95965 494 aaPredicted RBP11.67□□□□□ -0.54
RBM39-228ENST00000471635 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
RBM39-228ENST00000471635 OXER1Q8TDS5 423 aa11.67□□□□□ -0.54
RBM39-228ENST00000471635 FOSBP53539 338 aa11.64□□□□□ -0.55
RBM39-228ENST00000471635 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
RBM39-228ENST00000471635 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
RBM39-228ENST00000471635 JPH4Q96JJ6 628 aa11.59□□□□□ -0.55
RBM39-228ENST00000471635 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
RBM39-228ENST00000471635 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
RBM39-228ENST00000471635 NYAP1Q6ZVC0 841 aa11.56□□□□□ -0.56
RBM39-228ENST00000471635 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
RBM39-228ENST00000471635 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
RBM39-228ENST00000471635 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
RBM39-228ENST00000471635 ADAM33Q9BZ11 813 aa11.52□□□□□ -0.57
RBM39-228ENST00000471635 ANO8Q9HCE9 1232 aaPredicted RBP11.52□□□□□ -0.57
RBM39-228ENST00000471635 RABGEF1Q9UJ41 708 aa11.52□□□□□ -0.57
RBM39-228ENST00000471635 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
RBM39-228ENST00000471635 PPP1R3GB7ZBB8 358 aa11.49□□□□□ -0.57
RBM39-228ENST00000471635 KCNC4Q03721 635 aa11.49□□□□□ -0.57
RBM39-228ENST00000471635 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
RBM39-228ENST00000471635 LAPTM4BQ86VI4 370 aa11.48□□□□□ -0.57
RBM39-228ENST00000471635 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
RBM39-228ENST00000471635 BCAMP50895 628 aa11.47□□□□□ -0.57
RBM39-228ENST00000471635 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
RBM39-228ENST00000471635 TRAF7Q6Q0C0 670 aa11.46□□□□□ -0.57
RBM39-228ENST00000471635 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.57
RBM39-228ENST00000471635 EVI5O60447 810 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms