RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 PRR29P0C7W0 189 aa10.31□□□□□ -0.76
NF1-208ENST00000471572 EFCAB3Q8N7B9 438 aa10.31□□□□□ -0.76
NF1-208ENST00000471572 DDX27Q96GQ7 796 aaKnown RBP10.29□□□□□ -0.76
NF1-208ENST00000471572 DDRGK1Q96HY6 314 aa10.29□□□□□ -0.76
NF1-208ENST00000471572 CLEC11AQ9Y240 323 aa10.29□□□□□ -0.76
NF1-208ENST00000471572 NLRP6P59044 892 aa10.28□□□□□ -0.76
NF1-208ENST00000471572 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
NF1-208ENST00000471572 PDE4AP27815 886 aa10.28□□□□□ -0.76
NF1-208ENST00000471572 RAD21O60216 631 aa10.26□□□□□ -0.77
NF1-208ENST00000471572 PARP9Q8IXQ6 854 aa10.26□□□□□ -0.77
NF1-208ENST00000471572 RGS22Q8NE09 1264 aa10.26□□□□□ -0.77
NF1-208ENST00000471572 TSPYL2Q9H2G4 693 aaPredicted RBP10.24□□□□□ -0.77
NF1-208ENST00000471572 CCDC102AQ96A19 550 aa10.23□□□□□ -0.77
NF1-208ENST00000471572 IGSF3O75054 1194 aa10.22□□□□□ -0.77
NF1-208ENST00000471572 MCM6Q14566 821 aa10.22□□□□□ -0.77
NF1-208ENST00000471572 AEBP1Q8IUX7 1158 aa10.22□□□□□ -0.77
NF1-208ENST00000471572 AMHR2Q16671 573 aa10.21□□□□□ -0.77
NF1-208ENST00000471572 GOPCQ9HD26 462 aa10.21□□□□□ -0.77
NF1-208ENST00000471572 CABP2Q9NPB3 220 aa10.21□□□□□ -0.77
NF1-208ENST00000471572 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
NF1-208ENST00000471572 SOX12O15370 315 aa10.21□□□□□ -0.78
NF1-208ENST00000471572 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.78
NF1-208ENST00000471572 MTMR7Q9Y216 660 aa10.21□□□□□ -0.78
NF1-208ENST00000471572 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
NF1-208ENST00000471572 ZNF428Q96B54 188 aa10.18□□□□□ -0.78
NF1-208ENST00000471572 MINK1Q8N4C8 1332 aaPredicted RBP10.18□□□□□ -0.78
NF1-208ENST00000471572 FNBP4Q8N3X1 1017 aaPredicted RBP10.17□□□□□ -0.78
NF1-208ENST00000471572 MAP2K5Q13163 448 aa10.16□□□□□ -0.78
NF1-208ENST00000471572 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
NF1-208ENST00000471572 POM121Q96HA1 1249 aa10.16□□□□□ -0.78
NF1-208ENST00000471572 DPYSL4O14531 572 aa10.15□□□□□ -0.78
NF1-208ENST00000471572 IRF6O14896 467 aa10.15□□□□□ -0.78
NF1-208ENST00000471572 RETREG2Q8NC44 543 aa10.15□□□□□ -0.78
NF1-208ENST00000471572 FOXD4L5Q5VV16 416 aaPredicted RBP10.14□□□□□ -0.79
NF1-208ENST00000471572 FOXD4L4Q8WXT5 416 aaPredicted RBP10.14□□□□□ -0.79
NF1-208ENST00000471572 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
NF1-208ENST00000471572 CCDC61Q9Y6R9 512 aa10.14□□□□□ -0.79
NF1-208ENST00000471572 PDIA6Q15084 440 aa10.13□□□□□ -0.79
NF1-208ENST00000471572 TMCO4Q5TGY1 634 aa10.13□□□□□ -0.79
NF1-208ENST00000471572 IRF5Q13568 498 aa10.12□□□□□ -0.79
NF1-208ENST00000471572 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
NF1-208ENST00000471572 MFAP1P55081 439 aaKnown RBP10.12□□□□□ -0.79
NF1-208ENST00000471572 MS4A1P11836 297 aa10.11□□□□□ -0.79
NF1-208ENST00000471572 GZF1Q9H116 711 aaPredicted RBP10.11□□□□□ -0.79
NF1-208ENST00000471572 SERPINA10Q9UK55 444 aa10.11□□□□□ -0.79
NF1-208ENST00000471572 CCDC97Q96F63 343 aaPredicted RBP10.1□□□□□ -0.79
NF1-208ENST00000471572 FECHP22830 423 aa10.09□□□□□ -0.79
NF1-208ENST00000471572 PPP1R15BQ5SWA1 713 aa10.09□□□□□ -0.79
NF1-208ENST00000471572 AKT1S1Q96B36 256 aa10.09□□□□□ -0.79
NF1-208ENST00000471572 PCMTD1Q96MG8 357 aaPredicted RBP10.09□□□□□ -0.79
NF1-208ENST00000471572 RBM25P49756 843 aaKnown RBP10.07□□□□□ -0.8
NF1-208ENST00000471572 TTLL12Q14166 644 aaPredicted RBP10.07□□□□□ -0.8
NF1-208ENST00000471572 REM2Q8IYK8 340 aaPredicted RBP10.06□□□□□ -0.8
NF1-208ENST00000471572 REPIN1Q9BWE0 567 aaKnown RBP10.06□□□□□ -0.8
NF1-208ENST00000471572 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
NF1-208ENST00000471572 GIGYF2Q6Y7W6 1299 aaKnown RBP10.06□□□□□ -0.8
NF1-208ENST00000471572 SPDYE16A6NNV3 312 aaPredicted RBP10.05□□□□□ -0.8
NF1-208ENST00000471572 OXER1Q8TDS5 423 aa10.05□□□□□ -0.8
NF1-208ENST00000471572 NUTM2FA1L443 756 aa10.04□□□□□ -0.8
NF1-208ENST00000471572 GNPATO15228 680 aa10.04□□□□□ -0.8
NF1-208ENST00000471572 SH3D19Q5HYK7 790 aa10.02□□□□□ -0.81
NF1-208ENST00000471572 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
NF1-208ENST00000471572 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
NF1-208ENST00000471572 MAP3K13O43283 966 aa10□□□□□ -0.81
NF1-208ENST00000471572 GRXCR2A6NFK2 248 aa9.99□□□□□ -0.81
NF1-208ENST00000471572 COG6Q9Y2V7 657 aa9.99□□□□□ -0.81
NF1-208ENST00000471572 SHROOM4Q9ULL8 1493 aa9.98□□□□□ -0.81
NF1-208ENST00000471572 PITPNM1O00562 1244 aa9.97□□□□□ -0.81
NF1-208ENST00000471572 HIC1Q14526 733 aa9.97□□□□□ -0.81
NF1-208ENST00000471572 DSG2Q14126 1118 aa9.97□□□□□ -0.81
NF1-208ENST00000471572 OSBPP22059 807 aa9.95□□□□□ -0.82
NF1-208ENST00000471572 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
NF1-208ENST00000471572 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
NF1-208ENST00000471572 FARP1Q9Y4F1 1045 aaPredicted RBP9.95□□□□□ -0.82
NF1-208ENST00000471572 KIF12Q96FN5 646 aa9.94□□□□□ -0.82
NF1-208ENST00000471572 SKIV2LQ15477 1246 aaKnown RBP9.92□□□□□ -0.82
NF1-208ENST00000471572 FCHSD2O94868 740 aa9.92□□□□□ -0.82
NF1-208ENST00000471572 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
NF1-208ENST00000471572 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
NF1-208ENST00000471572 SPDYE5A6NIY4 337 aa9.9□□□□□ -0.82
NF1-208ENST00000471572 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
NF1-208ENST00000471572 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.82
NF1-208ENST00000471572 SNRKQ9NRH2 765 aa9.9□□□□□ -0.82
NF1-208ENST00000471572 E9PSI1 815 aa9.89□□□□□ -0.83
NF1-208ENST00000471572 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.88□□□□□ -0.83
NF1-208ENST00000471572 PPP1R15AO75807 674 aaPredicted RBP9.87□□□□□ -0.83
NF1-208ENST00000471572 PTGDRQ13258 359 aa9.87□□□□□ -0.83
NF1-208ENST00000471572 FBXO31Q5XUX0 539 aaPredicted RBP9.87□□□□□ -0.83
NF1-208ENST00000471572 POLR3EQ9NVU0 708 aa9.87□□□□□ -0.83
NF1-208ENST00000471572 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
NF1-208ENST00000471572 FOXK1P85037 733 aa9.85□□□□□ -0.83
NF1-208ENST00000471572 MDM2Q00987 491 aaPredicted RBP9.83□□□□□ -0.84
NF1-208ENST00000471572 DDX12PQ92771 950 aa9.82□□□□□ -0.84
NF1-208ENST00000471572 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
NF1-208ENST00000471572 SSTR3P32745 418 aaPredicted RBP9.82□□□□□ -0.84
NF1-208ENST00000471572 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
NF1-208ENST00000471572 GPCPD1Q9NPB8 672 aa9.82□□□□□ -0.84
NF1-208ENST00000471572 POM121CA8CG34 1229 aa9.81□□□□□ -0.84
NF1-208ENST00000471572 CLCN1P35523 988 aa9.81□□□□□ -0.84
NF1-208ENST00000471572 GOLGA2Q08379 1002 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms