RNA–Protein interactions for RNA: ENST00000471515.5

CHKB-206, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-206ENST00000471515 ZFYVE16Q7Z3T8 1539 aa14.39□□□□□ -0.11
CHKB-206ENST00000471515 SCAPERQ9BY12 1400 aa14.39□□□□□ -0.11
CHKB-206ENST00000471515 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
CHKB-206ENST00000471515 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
CHKB-206ENST00000471515 KDM5CP41229 1560 aa14.37□□□□□ -0.11
CHKB-206ENST00000471515 CCDC18Q5T9S5 1454 aa14.35□□□□□ -0.11
CHKB-206ENST00000471515 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
CHKB-206ENST00000471515 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
CHKB-206ENST00000471515 CDC42BPBQ9Y5S2 1711 aa14.34□□□□□ -0.11
CHKB-206ENST00000471515 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.12
CHKB-206ENST00000471515 PREX2Q70Z35 1606 aa14.33□□□□□ -0.12
CHKB-206ENST00000471515 CLIP1P30622 1438 aa14.32□□□□□ -0.12
CHKB-206ENST00000471515 ZNF518AQ6AHZ1 1483 aa14.32□□□□□ -0.12
CHKB-206ENST00000471515 LMTK3Q96Q04 1460 aa14.32□□□□□ -0.12
CHKB-206ENST00000471515 ARHGEF12Q9NZN5 1544 aa14.32□□□□□ -0.12
CHKB-206ENST00000471515 ARHGAP5Q13017 1502 aa14.31□□□□□ -0.12
CHKB-206ENST00000471515 ATP1B4Q9UN42 357 aaPredicted RBP14.31□□□□□ -0.12
CHKB-206ENST00000471515 ATP10AO60312 1499 aa14.31□□□□□ -0.12
CHKB-206ENST00000471515 ABCC1P33527 1531 aa14.31□□□□□ -0.12
CHKB-206ENST00000471515 RIMS1Q86UR5 1692 aaKnown RBP14.3□□□□□ -0.12
CHKB-206ENST00000471515 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
CHKB-206ENST00000471515 REREQ9P2R6 1566 aa14.29□□□□□ -0.12
CHKB-206ENST00000471515 ARID4BQ4LE39 1312 aaPredicted RBP14.28□□□□□ -0.12
CHKB-206ENST00000471515 CDC42BPAQ5VT25 1732 aa14.28□□□□□ -0.12
CHKB-206ENST00000471515 MLH3Q9UHC1 1453 aa14.28□□□□□ -0.12
CHKB-206ENST00000471515 DIP2CQ9Y2E4 1556 aa14.28□□□□□ -0.12
CHKB-206ENST00000471515 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
CHKB-206ENST00000471515 AFAP1Q8N556 730 aa14.27□□□□□ -0.13
CHKB-206ENST00000471515 ITSN2Q9NZM3 1697 aa14.26□□□□□ -0.13
CHKB-206ENST00000471515 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
CHKB-206ENST00000471515 GPATCH8Q9UKJ3 1502 aaKnown RBP14.25□□□□□ -0.13
CHKB-206ENST00000471515 FER1L4A9Z1Z3 1794 aa14.24□□□□□ -0.13
CHKB-206ENST00000471515 SAMD9LQ8IVG5 1584 aa14.23□□□□□ -0.13
CHKB-206ENST00000471515 AGLP35573 1532 aa14.23□□□□□ -0.13
CHKB-206ENST00000471515 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
CHKB-206ENST00000471515 CEP162Q5TB80 1403 aa14.2□□□□□ -0.14
CHKB-206ENST00000471515 SYCP2Q9BX26 1530 aa14.19□□□□□ -0.14
CHKB-206ENST00000471515 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
CHKB-206ENST00000471515 MLECQ14165 292 aa14.17□□□□□ -0.14
CHKB-206ENST00000471515 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
CHKB-206ENST00000471515 INO80Q9ULG1 1556 aaPredicted RBP14.16□□□□□ -0.14
CHKB-206ENST00000471515 PLXNC1O60486 1568 aa14.15□□□□□ -0.14
CHKB-206ENST00000471515 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
CHKB-206ENST00000471515 HSPA2P54652 639 aa14.14□□□□□ -0.15
CHKB-206ENST00000471515 MBD5Q9P267 1494 aa14.13□□□□□ -0.15
CHKB-206ENST00000471515 PREX1Q8TCU6 1659 aa14.13□□□□□ -0.15
CHKB-206ENST00000471515 PLEKHH2Q8IVE3 1493 aa14.12□□□□□ -0.15
CHKB-206ENST00000471515 MTUS2Q5JR59 1369 aa14.12□□□□□ -0.15
CHKB-206ENST00000471515 ATP7AQ04656 1500 aa14.12□□□□□ -0.15
CHKB-206ENST00000471515 CEBPAP49715 358 aaPredicted RBP14.12□□□□□ -0.15
CHKB-206ENST00000471515 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
CHKB-206ENST00000471515 C3P01024 1663 aa14.11□□□□□ -0.15
CHKB-206ENST00000471515 HNRNPMP52272 730 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHKB-206ENST00000471515 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
CHKB-206ENST00000471515 ZNF644Q9H582 1327 aaPredicted RBP14.09□□□□□ -0.15
CHKB-206ENST00000471515 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
CHKB-206ENST00000471515 STRCQ7RTU9 1775 aa14.08□□□□□ -0.16
CHKB-206ENST00000471515 SPAG9O60271 1321 aaKnown RBP14.08□□□□□ -0.16
CHKB-206ENST00000471515 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
CHKB-206ENST00000471515 CNTLNQ9NXG0 1405 aa14.07□□□□□ -0.16
CHKB-206ENST00000471515 A2MP01023 1474 aa14.06□□□□□ -0.16
CHKB-206ENST00000471515 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
CHKB-206ENST00000471515 SETD1BQ9UPS6 1966 aaKnown RBP14.06□□□□□ -0.16
CHKB-206ENST00000471515 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
CHKB-206ENST00000471515 FBXO41Q8TF61 875 aa14.06□□□□□ -0.16
CHKB-206ENST00000471515 VPS8Q8N3P4 1428 aa14.06□□□□□ -0.16
CHKB-206ENST00000471515 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
CHKB-206ENST00000471515 UHRF1BP1Q6BDS2 1440 aa14.05□□□□□ -0.16
CHKB-206ENST00000471515 NPATQ14207 1427 aa14.04□□□□□ -0.16
CHKB-206ENST00000471515 SUPT6HQ7KZ85 1726 aaKnown RBP14.04□□□□□ -0.16
CHKB-206ENST00000471515 LOC105371045A0A1W2PR82 267 aa14.03□□□□□ -0.16
CHKB-206ENST00000471515 MYT1LQ9UL68 1186 aa14.03□□□□□ -0.16
CHKB-206ENST00000471515 ADGBQ8N7X0 1667 aa14.02□□□□□ -0.16
CHKB-206ENST00000471515 CAMSAP2Q08AD1 1489 aa14.02□□□□□ -0.16
CHKB-206ENST00000471515 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
CHKB-206ENST00000471515 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
CHKB-206ENST00000471515 ZMYM3Q14202 1370 aa14□□□□□ -0.17
CHKB-206ENST00000471515 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
CHKB-206ENST00000471515 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
CHKB-206ENST00000471515 PTPRKQ15262 1439 aa13.99□□□□□ -0.17
CHKB-206ENST00000471515 NCOA1Q15788 1441 aa13.98□□□□□ -0.17
CHKB-206ENST00000471515 DHX29Q7Z478 1369 aaKnown RBP13.98□□□□□ -0.17
CHKB-206ENST00000471515 CLTCQ00610 1675 aaKnown RBP13.98□□□□□ -0.17
CHKB-206ENST00000471515 PTPRTO14522 1441 aa13.98□□□□□ -0.17
CHKB-206ENST00000471515 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
CHKB-206ENST00000471515 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
CHKB-206ENST00000471515 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
CHKB-206ENST00000471515 MYO3AQ8NEV4 1616 aa13.95□□□□□ -0.18
CHKB-206ENST00000471515 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
CHKB-206ENST00000471515 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
CHKB-206ENST00000471515 LTBP4Q8N2S1 1624 aa13.93□□□□□ -0.18
CHKB-206ENST00000471515 MAST1Q9Y2H9 1570 aa13.93□□□□□ -0.18
CHKB-206ENST00000471515 RSPH4AQ5TD94 716 aa13.93□□□□□ -0.18
CHKB-206ENST00000471515 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
CHKB-206ENST00000471515 CAMSAP1Q5T5Y3 1602 aa13.92□□□□□ -0.18
CHKB-206ENST00000471515 PLA2R1Q13018 1463 aa13.92□□□□□ -0.18
CHKB-206ENST00000471515 TCOF1Q13428 1488 aaKnown RBP13.92□□□□□ -0.18
CHKB-206ENST00000471515 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
CHKB-206ENST00000471515 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
CHKB-206ENST00000471515 MIA2Q96PC5 1412 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms