RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 CEP162Q5TB80 1403 aa37.72■■■■□ 3.63
RNF220-208ENST00000471494 POGZQ7Z3K3 1410 aa37.7■■■■□ 3.63
RNF220-208ENST00000471494 CDC42BPBQ9Y5S2 1711 aa37.7■■■■□ 3.63
RNF220-208ENST00000471494 PREX2Q70Z35 1606 aa37.69■■■■□ 3.62
RNF220-208ENST00000471494 ZFYVE16Q7Z3T8 1539 aa37.67■■■■□ 3.62
RNF220-208ENST00000471494 MAGI2Q86UL8 1455 aa37.64■■■■□ 3.62
RNF220-208ENST00000471494 BCORL1Q5H9F3 1711 aa37.63■■■■□ 3.61
RNF220-208ENST00000471494 ADAMTSL3P82987 1691 aa37.63■■■■□ 3.61
RNF220-208ENST00000471494 CDC42BPAQ5VT25 1732 aa37.62■■■■□ 3.61
RNF220-208ENST00000471494 ARID4BQ4LE39 1312 aaPredicted RBP37.61■■■■□ 3.61
RNF220-208ENST00000471494 YEATS2Q9ULM3 1422 aa37.59■■■■□ 3.61
RNF220-208ENST00000471494 ZNF518AQ6AHZ1 1483 aa37.56■■■■□ 3.6
RNF220-208ENST00000471494 ABCC1P33527 1531 aa37.51■■■■□ 3.59
RNF220-208ENST00000471494 KDM5CP41229 1560 aa37.51■■■■□ 3.59
RNF220-208ENST00000471494 MADDQ8WXG6 1647 aa37.5■■■■□ 3.59
RNF220-208ENST00000471494 SIGLEC1Q9BZZ2 1709 aa37.5■■■■□ 3.59
RNF220-208ENST00000471494 MTUS2Q5JR59 1369 aa37.49■■■■□ 3.59
RNF220-208ENST00000471494 ITSN2Q9NZM3 1697 aa37.49■■■■□ 3.59
RNF220-208ENST00000471494 LOC105371045A0A1W2PR82 267 aa37.48■■■■□ 3.59
RNF220-208ENST00000471494 HECW2Q9P2P5 1572 aa37.46■■■■□ 3.59
RNF220-208ENST00000471494 PTPRMP28827 1452 aa37.45■■■■□ 3.59
RNF220-208ENST00000471494 EHBP1L1Q8N3D4 1523 aa37.43■■■■□ 3.58
RNF220-208ENST00000471494 GPATCH8Q9UKJ3 1502 aaKnown RBP37.42■■■■□ 3.58
RNF220-208ENST00000471494 ATP10AO60312 1499 aa37.42■■■■□ 3.58
RNF220-208ENST00000471494 AFAP1Q8N556 730 aa37.42■■■■□ 3.58
RNF220-208ENST00000471494 RIMS1Q86UR5 1692 aaKnown RBP37.41■■■■□ 3.58
RNF220-208ENST00000471494 C9orf84Q5VXU9 1444 aa37.4■■■■□ 3.58
RNF220-208ENST00000471494 ARHGEF12Q9NZN5 1544 aa37.4■■■■□ 3.58
RNF220-208ENST00000471494 SAMD9LQ8IVG5 1584 aa37.38■■■■□ 3.58
RNF220-208ENST00000471494 MYT1LQ9UL68 1186 aa37.37■■■■□ 3.57
RNF220-208ENST00000471494 TRAPPC8Q9Y2L5 1435 aa37.36■■■■□ 3.57
RNF220-208ENST00000471494 CCNB3Q8WWL7 1395 aa37.36■■■■□ 3.57
RNF220-208ENST00000471494 DIP2CQ9Y2E4 1556 aa37.34■■■■□ 3.57
RNF220-208ENST00000471494 ZNF777Q9ULD5 760 aaPredicted RBP37.34■■■■□ 3.57
RNF220-208ENST00000471494 MLH3Q9UHC1 1453 aa37.33■■■■□ 3.57
RNF220-208ENST00000471494 FER1L4A9Z1Z3 1794 aa37.33■■■■□ 3.57
RNF220-208ENST00000471494 ABCA6Q8N139 1617 aa37.32■■■■□ 3.56
RNF220-208ENST00000471494 SYCP2Q9BX26 1530 aa37.31■■■■□ 3.56
RNF220-208ENST00000471494 VPS8Q8N3P4 1428 aa37.31■■■■□ 3.56
RNF220-208ENST00000471494 TIAM1Q13009 1591 aa37.3■■■■□ 3.56
RNF220-208ENST00000471494 CFDP1Q9UEE9 299 aaPredicted RBP37.29■■■■□ 3.56
RNF220-208ENST00000471494 MLECQ14165 292 aa37.28■■■■□ 3.56
RNF220-208ENST00000471494 PLEKHH2Q8IVE3 1493 aa37.26■■■■□ 3.56
RNF220-208ENST00000471494 REREQ9P2R6 1566 aa37.26■■■■□ 3.56
RNF220-208ENST00000471494 KIDINS220Q9ULH0 1771 aa37.26■■■■□ 3.56
RNF220-208ENST00000471494 SUPT6HQ7KZ85 1726 aaKnown RBP37.25■■■■□ 3.55
RNF220-208ENST00000471494 KIAA1107Q9UPP5 1409 aa37.2■■■■□ 3.55
RNF220-208ENST00000471494 HNRNPMP52272 730 aaKnown RBP eCLIP37.17■■■■□ 3.54
RNF220-208ENST00000471494 NCOA2Q15596 1464 aa37.15■■■■□ 3.54
RNF220-208ENST00000471494 SPAG9O60271 1321 aaKnown RBP37.12■■■■□ 3.53
RNF220-208ENST00000471494 AGLP35573 1532 aa37.11■■■■□ 3.53
RNF220-208ENST00000471494 INO80Q9ULG1 1556 aaPredicted RBP37.11■■■■□ 3.53
RNF220-208ENST00000471494 ATP7AQ04656 1500 aa37.1■■■■□ 3.53
RNF220-208ENST00000471494 PLPPR3Q6T4P5 718 aa37.1■■■■□ 3.53
RNF220-208ENST00000471494 LRRC9Q6ZRR7 1453 aa37.08■■■■□ 3.53
RNF220-208ENST00000471494 MAP3K1Q13233 1512 aa37.06■■■■□ 3.52
RNF220-208ENST00000471494 ZNF644Q9H582 1327 aaPredicted RBP37.06■■■■□ 3.52
RNF220-208ENST00000471494 LMTK3Q96Q04 1460 aa37.04■■■■□ 3.52
RNF220-208ENST00000471494 MBD5Q9P267 1494 aa37■■■■□ 3.51
RNF220-208ENST00000471494 CAMSAP2Q08AD1 1489 aa36.99■■■■□ 3.51
RNF220-208ENST00000471494 ADGBQ8N7X0 1667 aa36.96■■■■□ 3.51
RNF220-208ENST00000471494 PLXNC1O60486 1568 aa36.94■■■■□ 3.5
RNF220-208ENST00000471494 A2MP01023 1474 aa36.93■■■■□ 3.5
RNF220-208ENST00000471494 ESF1Q9H501 851 aaKnown RBP36.92■■■■□ 3.5
RNF220-208ENST00000471494 PREX1Q8TCU6 1659 aa36.92■■■■□ 3.5
RNF220-208ENST00000471494 CCDC141Q6ZP82 1450 aa36.91■■■■□ 3.5
RNF220-208ENST00000471494 C3P01024 1663 aa36.9■■■■□ 3.5
RNF220-208ENST00000471494 KANK4Q5T7N3 995 aaPredicted RBP36.9■■■■□ 3.5
RNF220-208ENST00000471494 CEBPAP49715 358 aaPredicted RBP36.88■■■■□ 3.49
RNF220-208ENST00000471494 RTEL1-TNFRSF6BF6WH68 1400 aa36.87■■■■□ 3.49
RNF220-208ENST00000471494 CNTLNQ9NXG0 1405 aa36.85■■■■□ 3.49
RNF220-208ENST00000471494 APLP2Q06481 763 aa36.85■■■■□ 3.49
RNF220-208ENST00000471494 ARHGEF5Q12774 1597 aa36.85■■■■□ 3.49
RNF220-208ENST00000471494 SETD1BQ9UPS6 1966 aaKnown RBP36.84■■■■□ 3.49
RNF220-208ENST00000471494 RSPH4AQ5TD94 716 aa36.82■■■■□ 3.48
RNF220-208ENST00000471494 MROH2AA6NES4 1674 aa36.82■■■■□ 3.48
RNF220-208ENST00000471494 MYOM3Q5VTT5 1437 aa36.79■■■■□ 3.48
RNF220-208ENST00000471494 HSPA2P54652 639 aa36.79■■■■□ 3.48
RNF220-208ENST00000471494 CLTCQ00610 1675 aaKnown RBP36.76■■■■□ 3.47
RNF220-208ENST00000471494 MIA2Q96PC5 1412 aa36.76■■■■□ 3.47
RNF220-208ENST00000471494 UHRF1BP1Q6BDS2 1440 aa36.73■■■■□ 3.47
RNF220-208ENST00000471494 DHX29Q7Z478 1369 aaKnown RBP36.7■■■■□ 3.47
RNF220-208ENST00000471494 TSPY4P0CV99 314 aa36.69■■■■□ 3.46
RNF220-208ENST00000471494 TSPY10P0CW01 314 aa36.69■■■■□ 3.46
RNF220-208ENST00000471494 GGT6Q6P531 493 aa36.69■■■■□ 3.46
RNF220-208ENST00000471494 MAST1Q9Y2H9 1570 aa36.66■■■■□ 3.46
RNF220-208ENST00000471494 ZMYM3Q14202 1370 aa36.64■■■■□ 3.46
RNF220-208ENST00000471494 NPATQ14207 1427 aa36.61■■■■□ 3.45
RNF220-208ENST00000471494 PTPN23Q9H3S7 1636 aa36.61■■■■□ 3.45
RNF220-208ENST00000471494 PPP6R1Q9UPN7 881 aa36.6■■■■□ 3.45
RNF220-208ENST00000471494 KIF3BO15066 747 aa36.57■■■■□ 3.44
RNF220-208ENST00000471494 CROCC2H7BZ55 1655 aa36.55■■■■□ 3.44
RNF220-208ENST00000471494 FAM135AQ9P2D6 1515 aa36.53■■■■□ 3.44
RNF220-208ENST00000471494 STRCQ7RTU9 1775 aa36.52■■■■□ 3.44
RNF220-208ENST00000471494 FGD6Q6ZV73 1430 aa36.51■■■■□ 3.44
RNF220-208ENST00000471494 KDM5DQ9BY66 1539 aa36.51■■■■□ 3.44
RNF220-208ENST00000471494 ILDR1Q86SU0 546 aaPredicted RBP36.49■■■■□ 3.43
RNF220-208ENST00000471494 PTPRKQ15262 1439 aa36.49■■■■□ 3.43
RNF220-208ENST00000471494 MYO3AQ8NEV4 1616 aa36.48■■■■□ 3.43
RNF220-208ENST00000471494 EIF2AK4Q9P2K8 1649 aaKnown RBP36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms