RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 ARHGAP5Q13017 1502 aa17.88■□□□□ 0.45
FN1-217ENST00000471193 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
FN1-217ENST00000471193 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
FN1-217ENST00000471193 FAM69CQ0P6D2 419 aa17.85■□□□□ 0.45
FN1-217ENST00000471193 SAMD9LQ8IVG5 1584 aa17.85■□□□□ 0.45
FN1-217ENST00000471193 CFAP74Q9C0B2 1584 aa17.85■□□□□ 0.45
FN1-217ENST00000471193 PPRC1Q5VV67 1664 aaKnown RBP17.84■□□□□ 0.45
FN1-217ENST00000471193 CAMSAP2Q08AD1 1489 aa17.84■□□□□ 0.45
FN1-217ENST00000471193 FANCAO15360 1455 aa17.82■□□□□ 0.44
FN1-217ENST00000471193 CFDP1Q9UEE9 299 aaPredicted RBP17.82■□□□□ 0.44
FN1-217ENST00000471193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
FN1-217ENST00000471193 ABCC1P33527 1531 aa17.81■□□□□ 0.44
FN1-217ENST00000471193 NEO1Q92859 1461 aa17.79■□□□□ 0.44
FN1-217ENST00000471193 PLEKHH2Q8IVE3 1493 aa17.78■□□□□ 0.44
FN1-217ENST00000471193 TEX14Q8IWB6 1497 aa17.78■□□□□ 0.44
FN1-217ENST00000471193 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.44
FN1-217ENST00000471193 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.44
FN1-217ENST00000471193 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
FN1-217ENST00000471193 ARHGEF5Q12774 1597 aa17.76■□□□□ 0.43
FN1-217ENST00000471193 KIAA1107Q9UPP5 1409 aa17.76■□□□□ 0.43
FN1-217ENST00000471193 DNMT1P26358 1616 aaKnown RBP17.76■□□□□ 0.43
FN1-217ENST00000471193 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
FN1-217ENST00000471193 ZNF777Q9ULD5 760 aaPredicted RBP17.75■□□□□ 0.43
FN1-217ENST00000471193 ADGRL1O94910 1474 aa17.75■□□□□ 0.43
FN1-217ENST00000471193 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
FN1-217ENST00000471193 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
FN1-217ENST00000471193 MBD5Q9P267 1494 aa17.74■□□□□ 0.43
FN1-217ENST00000471193 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
FN1-217ENST00000471193 ARHGEF12Q9NZN5 1544 aa17.73■□□□□ 0.43
FN1-217ENST00000471193 FAM50AQ14320 339 aaKnown RBP17.73■□□□□ 0.43
FN1-217ENST00000471193 CCDC141Q6ZP82 1450 aa17.71■□□□□ 0.43
FN1-217ENST00000471193 DAPK1P53355 1430 aa17.71■□□□□ 0.43
FN1-217ENST00000471193 TRHP20396 242 aaPredicted RBP17.7■□□□□ 0.42
FN1-217ENST00000471193 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
FN1-217ENST00000471193 ABCC5O15440 1437 aa17.69■□□□□ 0.42
FN1-217ENST00000471193 POGZQ7Z3K3 1410 aa17.68■□□□□ 0.42
FN1-217ENST00000471193 SCAPERQ9BY12 1400 aa17.68■□□□□ 0.42
FN1-217ENST00000471193 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
FN1-217ENST00000471193 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
FN1-217ENST00000471193 PTPRKQ15262 1439 aa17.66■□□□□ 0.42
FN1-217ENST00000471193 ZNF518AQ6AHZ1 1483 aa17.66■□□□□ 0.42
FN1-217ENST00000471193 KDM5CP41229 1560 aa17.66■□□□□ 0.42
FN1-217ENST00000471193 FRMPD1Q5SYB0 1578 aa17.66■□□□□ 0.42
FN1-217ENST00000471193 DENND4BO75064 1496 aaPredicted RBP17.65■□□□□ 0.42
FN1-217ENST00000471193 RICTORQ6R327 1708 aa17.65■□□□□ 0.42
FN1-217ENST00000471193 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.42
FN1-217ENST00000471193 ADGBQ8N7X0 1667 aa17.64■□□□□ 0.41
FN1-217ENST00000471193 INO80Q9ULG1 1556 aaPredicted RBP17.63■□□□□ 0.41
FN1-217ENST00000471193 C9orf84Q5VXU9 1444 aa17.63■□□□□ 0.41
FN1-217ENST00000471193 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
FN1-217ENST00000471193 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
FN1-217ENST00000471193 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
FN1-217ENST00000471193 ZMYM4Q5VZL5 1548 aa17.61■□□□□ 0.41
FN1-217ENST00000471193 ITGAEP38570 1179 aa17.6■□□□□ 0.41
FN1-217ENST00000471193 PLXNC1O60486 1568 aa17.6■□□□□ 0.41
FN1-217ENST00000471193 HECW2Q9P2P5 1572 aa17.6■□□□□ 0.41
FN1-217ENST00000471193 ATP7AQ04656 1500 aa17.59■□□□□ 0.41
FN1-217ENST00000471193 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
FN1-217ENST00000471193 ROCK1Q13464 1354 aa17.58■□□□□ 0.4
FN1-217ENST00000471193 RTEL1-TNFRSF6BF6WH68 1400 aa17.57■□□□□ 0.4
FN1-217ENST00000471193 GCC2Q8IWJ2 1684 aa17.57■□□□□ 0.4
FN1-217ENST00000471193 KDM6BO15054 1643 aa17.57■□□□□ 0.4
FN1-217ENST00000471193 MLH3Q9UHC1 1453 aa17.56■□□□□ 0.4
FN1-217ENST00000471193 AFAP1Q8N556 730 aa17.56■□□□□ 0.4
FN1-217ENST00000471193 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
FN1-217ENST00000471193 KIDINS220Q9ULH0 1771 aa17.56■□□□□ 0.4
FN1-217ENST00000471193 TSPY4P0CV99 314 aa17.55■□□□□ 0.4
FN1-217ENST00000471193 TSPY10P0CW01 314 aa17.55■□□□□ 0.4
FN1-217ENST00000471193 HFM1A2PYH4 1435 aa17.55■□□□□ 0.4
FN1-217ENST00000471193 NCOA1Q15788 1441 aa17.55■□□□□ 0.4
FN1-217ENST00000471193 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
FN1-217ENST00000471193 RAPGEF3O95398 923 aa17.54■□□□□ 0.4
FN1-217ENST00000471193 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
FN1-217ENST00000471193 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
FN1-217ENST00000471193 ABCA6Q8N139 1617 aa17.53■□□□□ 0.4
FN1-217ENST00000471193 MAGI2Q86UL8 1455 aa17.52■□□□□ 0.4
FN1-217ENST00000471193 NAIPQ13075 1403 aa17.51■□□□□ 0.39
FN1-217ENST00000471193 DIP2CQ9Y2E4 1556 aa17.51■□□□□ 0.39
FN1-217ENST00000471193 ARHGEF40Q8TER5 1519 aa17.51■□□□□ 0.39
FN1-217ENST00000471193 KIF15Q9NS87 1388 aa17.5■□□□□ 0.39
FN1-217ENST00000471193 DUOX2Q9NRD8 1548 aa17.48■□□□□ 0.39
FN1-217ENST00000471193 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
FN1-217ENST00000471193 RRP7BPQ9NSQ0 103 aa17.47■□□□□ 0.39
FN1-217ENST00000471193 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
FN1-217ENST00000471193 ERBINQ96RT1 1412 aa17.46■□□□□ 0.39
FN1-217ENST00000471193 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
FN1-217ENST00000471193 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
FN1-217ENST00000471193 EIF2AK4Q9P2K8 1649 aaKnown RBP17.43■□□□□ 0.38
FN1-217ENST00000471193 A2MP01023 1474 aa17.43■□□□□ 0.38
FN1-217ENST00000471193 RAB3GAP2Q9H2M9 1393 aa17.42■□□□□ 0.38
FN1-217ENST00000471193 MYT1LQ9UL68 1186 aa17.42■□□□□ 0.38
FN1-217ENST00000471193 BCORL1Q5H9F3 1711 aa17.41■□□□□ 0.38
FN1-217ENST00000471193 DHX29Q7Z478 1369 aaKnown RBP17.4■□□□□ 0.38
FN1-217ENST00000471193 ATP10AO60312 1499 aa17.4■□□□□ 0.38
FN1-217ENST00000471193 UNC13BO14795 1591 aa17.38■□□□□ 0.37
FN1-217ENST00000471193 DEPDC5O75140 1603 aa17.37■□□□□ 0.37
FN1-217ENST00000471193 AGLP35573 1532 aa17.37■□□□□ 0.37
FN1-217ENST00000471193 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
FN1-217ENST00000471193 SIGLEC1Q9BZZ2 1709 aa17.36■□□□□ 0.37
FN1-217ENST00000471193 HRCP23327 699 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms