RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
CLIP4-209ENST00000471165 PBX2P40425 430 aa13.01□□□□□ -0.33
CLIP4-209ENST00000471165 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
CLIP4-209ENST00000471165 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
CLIP4-209ENST00000471165 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.33
CLIP4-209ENST00000471165 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
CLIP4-209ENST00000471165 SOX12O15370 315 aa12.9□□□□□ -0.34
CLIP4-209ENST00000471165 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
CLIP4-209ENST00000471165 NUDT7P0C024 238 aa12.89□□□□□ -0.35
CLIP4-209ENST00000471165 ADGRD1Q6QNK2 874 aa12.87□□□□□ -0.35
CLIP4-209ENST00000471165 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
CLIP4-209ENST00000471165 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
CLIP4-209ENST00000471165 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
CLIP4-209ENST00000471165 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
CLIP4-209ENST00000471165 IRX2Q9BZI1 471 aaPredicted RBP12.78□□□□□ -0.36
CLIP4-209ENST00000471165 RGS20O76081 388 aa12.76□□□□□ -0.37
CLIP4-209ENST00000471165 HRO43593 1189 aa12.75□□□□□ -0.37
CLIP4-209ENST00000471165 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
CLIP4-209ENST00000471165 KIF3CO14782 793 aa12.74□□□□□ -0.37
CLIP4-209ENST00000471165 KCTD12Q96CX2 325 aaKnown RBP12.74□□□□□ -0.37
CLIP4-209ENST00000471165 TK2O00142 265 aa12.73□□□□□ -0.37
CLIP4-209ENST00000471165 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
CLIP4-209ENST00000471165 C2orf72A6NCS6 295 aa12.71□□□□□ -0.37
CLIP4-209ENST00000471165 SLC34A2O95436 690 aa12.71□□□□□ -0.37
CLIP4-209ENST00000471165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.7□□□□□ -0.38
CLIP4-209ENST00000471165 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
CLIP4-209ENST00000471165 DMRTA1Q5VZB9 504 aa12.69□□□□□ -0.38
CLIP4-209ENST00000471165 PSDA5PKW4 1024 aaPredicted RBP12.65□□□□□ -0.38
CLIP4-209ENST00000471165 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
CLIP4-209ENST00000471165 PSEN2P49810 448 aa12.65□□□□□ -0.38
CLIP4-209ENST00000471165 NLRP6P59044 892 aa12.65□□□□□ -0.38
CLIP4-209ENST00000471165 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
CLIP4-209ENST00000471165 FBXO22Q8NEZ5 403 aa12.64□□□□□ -0.39
CLIP4-209ENST00000471165 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
CLIP4-209ENST00000471165 STAC3Q96MF2 364 aa12.61□□□□□ -0.39
CLIP4-209ENST00000471165 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
CLIP4-209ENST00000471165 PTPN5P54829 565 aa12.6□□□□□ -0.39
CLIP4-209ENST00000471165 A0A0G2JS52 829 aa12.58□□□□□ -0.4
CLIP4-209ENST00000471165 KDM4FA0A1W2PPD8 638 aa12.56□□□□□ -0.4
CLIP4-209ENST00000471165 TMC2Q8TDI7 906 aa12.5□□□□□ -0.41
CLIP4-209ENST00000471165 MFRPQ9BY79 579 aa12.49□□□□□ -0.41
CLIP4-209ENST00000471165 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
CLIP4-209ENST00000471165 Q6ZNB5 142 aa12.47□□□□□ -0.41
CLIP4-209ENST00000471165 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.41
CLIP4-209ENST00000471165 VPS9D1Q9Y2B5 631 aa12.46□□□□□ -0.41
CLIP4-209ENST00000471165 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
CLIP4-209ENST00000471165 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
CLIP4-209ENST00000471165 PTCD2Q8WV60 388 aaKnown RBP12.43□□□□□ -0.42
CLIP4-209ENST00000471165 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
CLIP4-209ENST00000471165 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
CLIP4-209ENST00000471165 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-209ENST00000471165 WNT2BQ93097 391 aa12.33□□□□□ -0.44
CLIP4-209ENST00000471165 SLC4A5Q9BY07 1137 aa12.33□□□□□ -0.44
CLIP4-209ENST00000471165 GOLGA8CPA6NN73 597 aa12.31□□□□□ -0.44
CLIP4-209ENST00000471165 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
CLIP4-209ENST00000471165 TBC1D12O60347 775 aa12.27□□□□□ -0.45
CLIP4-209ENST00000471165 LCE2BO14633 110 aa12.26□□□□□ -0.45
CLIP4-209ENST00000471165 PLPP6Q8IY26 295 aa12.26□□□□□ -0.45
CLIP4-209ENST00000471165 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
CLIP4-209ENST00000471165 STK25O00506 426 aa12.25□□□□□ -0.45
CLIP4-209ENST00000471165 ITGBL1O95965 494 aaPredicted RBP12.24□□□□□ -0.45
CLIP4-209ENST00000471165 FOXK1P85037 733 aa12.24□□□□□ -0.45
CLIP4-209ENST00000471165 BCL2L12Q9HB09 334 aa12.23□□□□□ -0.45
CLIP4-209ENST00000471165 PPP1R37O75864 691 aa12.22□□□□□ -0.45
CLIP4-209ENST00000471165 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
CLIP4-209ENST00000471165 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
CLIP4-209ENST00000471165 LAPTM4AQ15012 233 aa12.19□□□□□ -0.46
CLIP4-209ENST00000471165 TRAF7Q6Q0C0 670 aa12.18□□□□□ -0.46
CLIP4-209ENST00000471165 PTPREP23469 700 aa12.16□□□□□ -0.46
CLIP4-209ENST00000471165 DSG2Q14126 1118 aa12.15□□□□□ -0.46
CLIP4-209ENST00000471165 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
CLIP4-209ENST00000471165 NBPF3Q9H094 633 aa12.14□□□□□ -0.47
CLIP4-209ENST00000471165 GFRA3O60609 400 aa12.11□□□□□ -0.47
CLIP4-209ENST00000471165 FOSBP53539 338 aa12.1□□□□□ -0.47
CLIP4-209ENST00000471165 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
CLIP4-209ENST00000471165 ANKK1Q8NFD2 765 aa12.07□□□□□ -0.48
CLIP4-209ENST00000471165 BCAMP50895 628 aa12.05□□□□□ -0.48
CLIP4-209ENST00000471165 KCNC4Q03721 635 aa12.05□□□□□ -0.48
CLIP4-209ENST00000471165 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLIP4-209ENST00000471165 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
CLIP4-209ENST00000471165 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
CLIP4-209ENST00000471165 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
CLIP4-209ENST00000471165 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
CLIP4-209ENST00000471165 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
CLIP4-209ENST00000471165 ZNF787Q6DD87 383 aa11.98□□□□□ -0.49
CLIP4-209ENST00000471165 RABGEF1Q9UJ41 708 aa11.98□□□□□ -0.49
CLIP4-209ENST00000471165 NRG2O14511 850 aaPredicted RBP11.97□□□□□ -0.49
CLIP4-209ENST00000471165 WBP1LQ9NX94 342 aa11.96□□□□□ -0.49
CLIP4-209ENST00000471165 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-209ENST00000471165 PROX2Q3B8N5 592 aa11.94□□□□□ -0.5
CLIP4-209ENST00000471165 ZNF775Q96BV0 537 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-209ENST00000471165 LAPTM4BQ86VI4 370 aa11.92□□□□□ -0.5
CLIP4-209ENST00000471165 PPP1R3GB7ZBB8 358 aa11.91□□□□□ -0.5
CLIP4-209ENST00000471165 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-209ENST00000471165 ZFRQ96KR1 1074 aaKnown RBP11.89□□□□□ -0.51
CLIP4-209ENST00000471165 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
CLIP4-209ENST00000471165 EVI5O60447 810 aa11.87□□□□□ -0.51
CLIP4-209ENST00000471165 COL9A1P20849 921 aa11.87□□□□□ -0.51
CLIP4-209ENST00000471165 RGL2O15211 777 aa11.86□□□□□ -0.51
CLIP4-209ENST00000471165 PPP1R15BQ5SWA1 713 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms