RNA–Protein interactions for RNA: ENST00000471139.1

CCDC129-209, Transcript of Coiled-coil domain-containing protein 129, humanhuman

TSL 2

Gene CCDC129, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC129-209ENST00000471139 PPP1R37O75864 691 aa12.16□□□□□ -0.46
CCDC129-209ENST00000471139 EMP3P54852 163 aa12.16□□□□□ -0.46
CCDC129-209ENST00000471139 NLRP6P59044 892 aa12.14□□□□□ -0.47
CCDC129-209ENST00000471139 PAXIP1Q6ZW49 1069 aaPredicted RBP12.13□□□□□ -0.47
CCDC129-209ENST00000471139 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
CCDC129-209ENST00000471139 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
CCDC129-209ENST00000471139 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
CCDC129-209ENST00000471139 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
CCDC129-209ENST00000471139 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
CCDC129-209ENST00000471139 HS3ST6Q96QI5 342 aa12.07□□□□□ -0.48
CCDC129-209ENST00000471139 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
CCDC129-209ENST00000471139 MMRN1Q13201 1228 aa12.06□□□□□ -0.48
CCDC129-209ENST00000471139 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
CCDC129-209ENST00000471139 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
CCDC129-209ENST00000471139 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
CCDC129-209ENST00000471139 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
CCDC129-209ENST00000471139 DOK7Q18PE1 504 aa11.99□□□□□ -0.49
CCDC129-209ENST00000471139 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
CCDC129-209ENST00000471139 HOXB1P14653 301 aaPredicted RBP11.96□□□□□ -0.49
CCDC129-209ENST00000471139 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
CCDC129-209ENST00000471139 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
CCDC129-209ENST00000471139 KRTAP3-2Q9BYR7 98 aa11.96□□□□□ -0.49
CCDC129-209ENST00000471139 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.49
CCDC129-209ENST00000471139 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
CCDC129-209ENST00000471139 ERBB3P21860 1342 aa11.94□□□□□ -0.5
CCDC129-209ENST00000471139 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
CCDC129-209ENST00000471139 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
CCDC129-209ENST00000471139 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
CCDC129-209ENST00000471139 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
CCDC129-209ENST00000471139 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
CCDC129-209ENST00000471139 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
CCDC129-209ENST00000471139 C2orf72A6NCS6 295 aa11.8□□□□□ -0.52
CCDC129-209ENST00000471139 GPR153Q6NV75 609 aa11.8□□□□□ -0.52
CCDC129-209ENST00000471139 KIF3CO14782 793 aa11.79□□□□□ -0.52
CCDC129-209ENST00000471139 ARSIQ5FYB1 569 aa11.79□□□□□ -0.52
CCDC129-209ENST00000471139 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
CCDC129-209ENST00000471139 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCDC129-209ENST00000471139 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
CCDC129-209ENST00000471139 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
CCDC129-209ENST00000471139 ZNF687Q8N1G0 1237 aa11.74□□□□□ -0.53
CCDC129-209ENST00000471139 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
CCDC129-209ENST00000471139 DSG2Q14126 1118 aa11.72□□□□□ -0.53
CCDC129-209ENST00000471139 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
CCDC129-209ENST00000471139 PDE4AP27815 886 aa11.71□□□□□ -0.53
CCDC129-209ENST00000471139 MFSD10Q14728 455 aa11.68□□□□□ -0.54
CCDC129-209ENST00000471139 FOXK1P85037 733 aa11.67□□□□□ -0.54
CCDC129-209ENST00000471139 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
CCDC129-209ENST00000471139 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
CCDC129-209ENST00000471139 PPP1R15BQ5SWA1 713 aa11.66□□□□□ -0.54
CCDC129-209ENST00000471139 PLPP6Q8IY26 295 aa11.66□□□□□ -0.54
CCDC129-209ENST00000471139 DDX27Q96GQ7 796 aaKnown RBP11.66□□□□□ -0.54
CCDC129-209ENST00000471139 ANKRD13DQ6ZTN6 518 aa11.65□□□□□ -0.54
CCDC129-209ENST00000471139 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
CCDC129-209ENST00000471139 NUDT7P0C024 238 aa11.62□□□□□ -0.55
CCDC129-209ENST00000471139 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
CCDC129-209ENST00000471139 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
CCDC129-209ENST00000471139 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
CCDC129-209ENST00000471139 WDR70Q9NW82 654 aa11.58□□□□□ -0.56
CCDC129-209ENST00000471139 PCDHGA4Q9Y5G9 962 aa11.58□□□□□ -0.56
CCDC129-209ENST00000471139 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
CCDC129-209ENST00000471139 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
CCDC129-209ENST00000471139 UPF1Q92900 1129 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC129-209ENST00000471139 SLC34A2O95436 690 aa11.53□□□□□ -0.56
CCDC129-209ENST00000471139 LSM11P83369 360 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC129-209ENST00000471139 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
CCDC129-209ENST00000471139 PTGER2P43116 358 aa11.52□□□□□ -0.57
CCDC129-209ENST00000471139 E2F4Q16254 413 aa11.52□□□□□ -0.57
CCDC129-209ENST00000471139 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
CCDC129-209ENST00000471139 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
CCDC129-209ENST00000471139 PTCD2Q8WV60 388 aaKnown RBP11.48□□□□□ -0.57
CCDC129-209ENST00000471139 POTEEQ6S8J3 1075 aa11.47□□□□□ -0.57
CCDC129-209ENST00000471139 DPYSL4O14531 572 aa11.46□□□□□ -0.57
CCDC129-209ENST00000471139 PBX2P40425 430 aa11.46□□□□□ -0.57
CCDC129-209ENST00000471139 KDM4FA0A1W2PPD8 638 aa11.42□□□□□ -0.58
CCDC129-209ENST00000471139 MAP3K9P80192 1104 aa11.41□□□□□ -0.58
CCDC129-209ENST00000471139 ARHGAP33O14559 1287 aa11.4□□□□□ -0.58
CCDC129-209ENST00000471139 PSDA5PKW4 1024 aaPredicted RBP11.38□□□□□ -0.59
CCDC129-209ENST00000471139 EVI5O60447 810 aa11.37□□□□□ -0.59
CCDC129-209ENST00000471139 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
CCDC129-209ENST00000471139 TBC1D12O60347 775 aa11.36□□□□□ -0.59
CCDC129-209ENST00000471139 ADGRD1Q6QNK2 874 aa11.36□□□□□ -0.59
CCDC129-209ENST00000471139 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
CCDC129-209ENST00000471139 PSEN2P49810 448 aa11.35□□□□□ -0.59
CCDC129-209ENST00000471139 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
CCDC129-209ENST00000471139 PDIA6Q15084 440 aa11.33□□□□□ -0.6
CCDC129-209ENST00000471139 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
CCDC129-209ENST00000471139 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.6
CCDC129-209ENST00000471139 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
CCDC129-209ENST00000471139 SEMA3EO15041 775 aa11.3□□□□□ -0.6
CCDC129-209ENST00000471139 HCSTQ9UBK5 93 aa11.29□□□□□ -0.6
CCDC129-209ENST00000471139 MLLT3P42568 568 aaPredicted RBP11.28□□□□□ -0.6
CCDC129-209ENST00000471139 DDX12PQ92771 950 aa11.28□□□□□ -0.6
CCDC129-209ENST00000471139 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
CCDC129-209ENST00000471139 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
CCDC129-209ENST00000471139 TK2O00142 265 aa11.26□□□□□ -0.61
CCDC129-209ENST00000471139 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
CCDC129-209ENST00000471139 KCNK17Q96T54 332 aa11.25□□□□□ -0.61
CCDC129-209ENST00000471139 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
CCDC129-209ENST00000471139 HRO43593 1189 aa11.24□□□□□ -0.61
CCDC129-209ENST00000471139 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms