RNA–Protein interactions for RNA: ENST00000471134.1

TRA2B-210, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-210ENST00000471134 FAM205CA6NFA0 338 aa15.47■□□□□ 0.07
TRA2B-210ENST00000471134 HOXB1P14653 301 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-210ENST00000471134 ZNF710Q8N1W2 664 aa15.47■□□□□ 0.07
TRA2B-210ENST00000471134 PPP1R37O75864 691 aa15.44■□□□□ 0.06
TRA2B-210ENST00000471134 HS6ST3Q8IZP7 471 aa15.44■□□□□ 0.06
TRA2B-210ENST00000471134 KIF3CO14782 793 aa15.4■□□□□ 0.06
TRA2B-210ENST00000471134 C2orf72A6NCS6 295 aa15.37■□□□□ 0.05
TRA2B-210ENST00000471134 RIMBP2O15034 1052 aa15.37■□□□□ 0.05
TRA2B-210ENST00000471134 CHGAP10645 457 aaKnown RBP15.37■□□□□ 0.05
TRA2B-210ENST00000471134 KRTAP3-3Q9BYR6 98 aa15.37■□□□□ 0.05
TRA2B-210ENST00000471134 KRTAP3-2Q9BYR7 98 aa15.37■□□□□ 0.05
TRA2B-210ENST00000471134 GPR153Q6NV75 609 aa15.36■□□□□ 0.05
TRA2B-210ENST00000471134 ZSWIM6Q9HCJ5 1215 aa15.35■□□□□ 0.05
TRA2B-210ENST00000471134 SPNS2Q8IVW8 549 aa15.32■□□□□ 0.04
TRA2B-210ENST00000471134 NKX1-1Q15270 411 aaPredicted RBP15.31■□□□□ 0.04
TRA2B-210ENST00000471134 ERBB3P21860 1342 aa15.31■□□□□ 0.04
TRA2B-210ENST00000471134 ARSIQ5FYB1 569 aa15.29■□□□□ 0.04
TRA2B-210ENST00000471134 KHSRPQ92945 711 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRA2B-210ENST00000471134 VARS2Q5ST30 1063 aaKnown RBP15.27■□□□□ 0.04
TRA2B-210ENST00000471134 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
TRA2B-210ENST00000471134 MMRN1Q13201 1228 aa15.24■□□□□ 0.03
TRA2B-210ENST00000471134 TMC2Q8TDI7 906 aa15.23■□□□□ 0.03
TRA2B-210ENST00000471134 SLC34A2O95436 690 aa15.15■□□□□ 0.02
TRA2B-210ENST00000471134 PCDHGA4Q9Y5G9 962 aa15.14■□□□□ 0.01
TRA2B-210ENST00000471134 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
TRA2B-210ENST00000471134 NUDT7P0C024 238 aa15.13■□□□□ 0.01
TRA2B-210ENST00000471134 ZNF687Q8N1G0 1237 aa15.13■□□□□ 0.01
TRA2B-210ENST00000471134 GPHNQ9NQX3 736 aaPredicted RBP15.1■□□□□ 0.01
TRA2B-210ENST00000471134 FOXK1P85037 733 aa15.09■□□□□ 0.01
TRA2B-210ENST00000471134 DSG2Q14126 1118 aa15.07■□□□□ 0
TRA2B-210ENST00000471134 PLPP6Q8IY26 295 aa15.06■□□□□ 0
TRA2B-210ENST00000471134 LHX6Q9UPM6 363 aa15.05■□□□□ -0
TRA2B-210ENST00000471134 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
TRA2B-210ENST00000471134 DCAF8L2P0C7V8 631 aa15.03■□□□□ -0
TRA2B-210ENST00000471134 RYDENQ9NUL5 291 aaKnown RBP15.03■□□□□ -0
TRA2B-210ENST00000471134 PTCD2Q8WV60 388 aaKnown RBP15.01□□□□□ -0.01
TRA2B-210ENST00000471134 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
TRA2B-210ENST00000471134 CRISPLD2Q9H0B8 497 aa14.99□□□□□ -0.01
TRA2B-210ENST00000471134 POTEEQ6S8J3 1075 aa14.97□□□□□ -0.01
TRA2B-210ENST00000471134 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
TRA2B-210ENST00000471134 LSM11P83369 360 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRA2B-210ENST00000471134 AXIN2Q9Y2T1 843 aa14.9□□□□□ -0.02
TRA2B-210ENST00000471134 PPP1R15BQ5SWA1 713 aa14.89□□□□□ -0.03
TRA2B-210ENST00000471134 ANKRD13DQ6ZTN6 518 aa14.89□□□□□ -0.03
TRA2B-210ENST00000471134 OXER1Q8TDS5 423 aa14.87□□□□□ -0.03
TRA2B-210ENST00000471134 PBX2P40425 430 aa14.86□□□□□ -0.03
TRA2B-210ENST00000471134 UPF1Q92900 1129 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRA2B-210ENST00000471134 RNF166Q96A37 237 aaPredicted RBP14.86□□□□□ -0.03
TRA2B-210ENST00000471134 MYT1LQ9UL68 1186 aa14.85□□□□□ -0.03
TRA2B-210ENST00000471134 PDE4AP27815 886 aa14.84□□□□□ -0.03
TRA2B-210ENST00000471134 TBC1D12O60347 775 aa14.82□□□□□ -0.04
TRA2B-210ENST00000471134 PSDA5PKW4 1024 aaPredicted RBP14.81□□□□□ -0.04
TRA2B-210ENST00000471134 CADPS2Q86UW7 1296 aa14.81□□□□□ -0.04
TRA2B-210ENST00000471134 LARP6Q9BRS8 491 aaKnown RBP14.8□□□□□ -0.04
TRA2B-210ENST00000471134 PTGER2P43116 358 aa14.77□□□□□ -0.05
TRA2B-210ENST00000471134 MFSD10Q14728 455 aa14.77□□□□□ -0.05
TRA2B-210ENST00000471134 ARHGAP33O14559 1287 aa14.76□□□□□ -0.05
TRA2B-210ENST00000471134 DDX27Q96GQ7 796 aaKnown RBP14.76□□□□□ -0.05
TRA2B-210ENST00000471134 PSEN2P49810 448 aa14.75□□□□□ -0.05
TRA2B-210ENST00000471134 PPP4R3BQ5MIZ7 849 aa14.74□□□□□ -0.05
TRA2B-210ENST00000471134 DMRTA1Q5VZB9 504 aa14.74□□□□□ -0.05
TRA2B-210ENST00000471134 RTN4Q9NQC3 1192 aaKnown RBP14.72□□□□□ -0.05
TRA2B-210ENST00000471134 AMER1Q5JTC6 1135 aaPredicted RBP14.7□□□□□ -0.06
TRA2B-210ENST00000471134 ADGRD1Q6QNK2 874 aa14.7□□□□□ -0.06
TRA2B-210ENST00000471134 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
TRA2B-210ENST00000471134 EMILIN3Q9NT22 766 aa14.69□□□□□ -0.06
TRA2B-210ENST00000471134 ZNF454Q8N9F8 522 aa14.67□□□□□ -0.06
TRA2B-210ENST00000471134 EVI5O60447 810 aa14.65□□□□□ -0.06
TRA2B-210ENST00000471134 KCNK17Q96T54 332 aa14.65□□□□□ -0.06
TRA2B-210ENST00000471134 ANO8Q9HCE9 1232 aaPredicted RBP14.65□□□□□ -0.06
TRA2B-210ENST00000471134 FOSBP53539 338 aa14.64□□□□□ -0.07
TRA2B-210ENST00000471134 TK2O00142 265 aa14.62□□□□□ -0.07
TRA2B-210ENST00000471134 HRO43593 1189 aa14.62□□□□□ -0.07
TRA2B-210ENST00000471134 MAP3K9P80192 1104 aa14.59□□□□□ -0.07
TRA2B-210ENST00000471134 JPH4Q96JJ6 628 aa14.59□□□□□ -0.07
TRA2B-210ENST00000471134 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
TRA2B-210ENST00000471134 CAMK2BQ13554 666 aa14.55□□□□□ -0.08
TRA2B-210ENST00000471134 ADAM33Q9BZ11 813 aa14.53□□□□□ -0.08
TRA2B-210ENST00000471134 VPS9D1Q9Y2B5 631 aa14.53□□□□□ -0.08
TRA2B-210ENST00000471134 SPRYD3Q8NCJ5 442 aa14.51□□□□□ -0.09
TRA2B-210ENST00000471134 ZDHHC16Q969W1 377 aa14.51□□□□□ -0.09
TRA2B-210ENST00000471134 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
TRA2B-210ENST00000471134 PTPREP23469 700 aa14.5□□□□□ -0.09
TRA2B-210ENST00000471134 PCDHGA10Q9Y5H3 936 aa14.49□□□□□ -0.09
TRA2B-210ENST00000471134 DPYSL4O14531 572 aa14.48□□□□□ -0.09
TRA2B-210ENST00000471134 ZBED2Q9BTP6 218 aa14.47□□□□□ -0.09
TRA2B-210ENST00000471134 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.47□□□□□ -0.09
TRA2B-210ENST00000471134 SLC4A5Q9BY07 1137 aa14.46□□□□□ -0.09
TRA2B-210ENST00000471134 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
TRA2B-210ENST00000471134 KCTD12Q96CX2 325 aaKnown RBP14.42□□□□□ -0.1
TRA2B-210ENST00000471134 CFAP44Q96MT7 982 aa14.42□□□□□ -0.1
TRA2B-210ENST00000471134 HCSTQ9UBK5 93 aa14.42□□□□□ -0.1
TRA2B-210ENST00000471134 BHMG1C9JSJ3 638 aaPredicted RBP14.41□□□□□ -0.1
TRA2B-210ENST00000471134 PHF14O94880 888 aa14.4□□□□□ -0.1
TRA2B-210ENST00000471134 TYW1BQ6NUM6 668 aa14.39□□□□□ -0.11
TRA2B-210ENST00000471134 COL9A1P20849 921 aa14.38□□□□□ -0.11
TRA2B-210ENST00000471134 STAC3Q96MF2 364 aa14.37□□□□□ -0.11
TRA2B-210ENST00000471134 PPP1R3GB7ZBB8 358 aa14.36□□□□□ -0.11
TRA2B-210ENST00000471134 FBXW7Q969H0 707 aa14.35□□□□□ -0.11
TRA2B-210ENST00000471134 PROX2Q3B8N5 592 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms