RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
SCNM1-205ENST00000471039 LRRC9Q6ZRR7 1453 aa19.68■□□□□ 0.74
SCNM1-205ENST00000471039 PHLDB1Q86UU1 1377 aa19.67■□□□□ 0.74
SCNM1-205ENST00000471039 ABCC1P33527 1531 aa19.66■□□□□ 0.74
SCNM1-205ENST00000471039 AKNAQ7Z591 1439 aa19.65■□□□□ 0.74
SCNM1-205ENST00000471039 SAMD9LQ8IVG5 1584 aa19.65■□□□□ 0.74
SCNM1-205ENST00000471039 ADGRL1O94910 1474 aa19.63■□□□□ 0.73
SCNM1-205ENST00000471039 NCOA2Q15596 1464 aa19.63■□□□□ 0.73
SCNM1-205ENST00000471039 ZMYM4Q5VZL5 1548 aa19.62■□□□□ 0.73
SCNM1-205ENST00000471039 GPATCH8Q9UKJ3 1502 aaKnown RBP19.62■□□□□ 0.73
SCNM1-205ENST00000471039 ARHGEF40Q8TER5 1519 aa19.59■□□□□ 0.73
SCNM1-205ENST00000471039 DENND4BO75064 1496 aaPredicted RBP19.59■□□□□ 0.73
SCNM1-205ENST00000471039 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
SCNM1-205ENST00000471039 KDM5CP41229 1560 aa19.57■□□□□ 0.72
SCNM1-205ENST00000471039 CCNB3Q8WWL7 1395 aa19.57■□□□□ 0.72
SCNM1-205ENST00000471039 SYCP2Q9BX26 1530 aa19.56■□□□□ 0.72
SCNM1-205ENST00000471039 HECW2Q9P2P5 1572 aa19.54■□□□□ 0.72
SCNM1-205ENST00000471039 SCAPERQ9BY12 1400 aa19.54■□□□□ 0.72
SCNM1-205ENST00000471039 EFCAB2Q5VUJ9 269 aa19.53■□□□□ 0.72
SCNM1-205ENST00000471039 ZNF518AQ6AHZ1 1483 aa19.53■□□□□ 0.72
SCNM1-205ENST00000471039 ARHGEF12Q9NZN5 1544 aa19.52■□□□□ 0.72
SCNM1-205ENST00000471039 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.72
SCNM1-205ENST00000471039 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
SCNM1-205ENST00000471039 CAMSAP2Q08AD1 1489 aa19.49■□□□□ 0.71
SCNM1-205ENST00000471039 PLEKHH2Q8IVE3 1493 aa19.49■□□□□ 0.71
SCNM1-205ENST00000471039 RAPGEF3O95398 923 aa19.49■□□□□ 0.71
SCNM1-205ENST00000471039 APLP2Q06481 763 aa19.49■□□□□ 0.71
SCNM1-205ENST00000471039 ABCA6Q8N139 1617 aa19.48■□□□□ 0.71
SCNM1-205ENST00000471039 INO80Q9ULG1 1556 aaPredicted RBP19.48■□□□□ 0.71
SCNM1-205ENST00000471039 SIGLEC1Q9BZZ2 1709 aa19.48■□□□□ 0.71
SCNM1-205ENST00000471039 KIDINS220Q9ULH0 1771 aa19.47■□□□□ 0.71
SCNM1-205ENST00000471039 MYOM3Q5VTT5 1437 aa19.47■□□□□ 0.71
SCNM1-205ENST00000471039 MAGI2Q86UL8 1455 aa19.46■□□□□ 0.71
SCNM1-205ENST00000471039 DIP2CQ9Y2E4 1556 aa19.45■□□□□ 0.7
SCNM1-205ENST00000471039 TRAPPC8Q9Y2L5 1435 aa19.45■□□□□ 0.7
SCNM1-205ENST00000471039 KIAA1107Q9UPP5 1409 aa19.44■□□□□ 0.7
SCNM1-205ENST00000471039 CROCC2H7BZ55 1655 aa19.44■□□□□ 0.7
SCNM1-205ENST00000471039 CFDP1Q9UEE9 299 aaPredicted RBP19.44■□□□□ 0.7
SCNM1-205ENST00000471039 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
SCNM1-205ENST00000471039 PTPN23Q9H3S7 1636 aa19.43■□□□□ 0.7
SCNM1-205ENST00000471039 YEATS2Q9ULM3 1422 aa19.43■□□□□ 0.7
SCNM1-205ENST00000471039 ZNF777Q9ULD5 760 aaPredicted RBP19.41■□□□□ 0.7
SCNM1-205ENST00000471039 MIA2Q96PC5 1412 aa19.41■□□□□ 0.7
SCNM1-205ENST00000471039 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
SCNM1-205ENST00000471039 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
SCNM1-205ENST00000471039 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
SCNM1-205ENST00000471039 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
SCNM1-205ENST00000471039 ADGBQ8N7X0 1667 aa19.4■□□□□ 0.7
SCNM1-205ENST00000471039 BCORL1Q5H9F3 1711 aa19.39■□□□□ 0.7
SCNM1-205ENST00000471039 CCDC141Q6ZP82 1450 aa19.38■□□□□ 0.69
SCNM1-205ENST00000471039 FGD6Q6ZV73 1430 aa19.37■□□□□ 0.69
SCNM1-205ENST00000471039 ZNF644Q9H582 1327 aaPredicted RBP19.37■□□□□ 0.69
SCNM1-205ENST00000471039 DNMT1P26358 1616 aaKnown RBP19.36■□□□□ 0.69
SCNM1-205ENST00000471039 TCOF1Q13428 1488 aaKnown RBP19.35■□□□□ 0.69
SCNM1-205ENST00000471039 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
SCNM1-205ENST00000471039 AFAP1Q8N556 730 aa19.35■□□□□ 0.69
SCNM1-205ENST00000471039 MAST1Q9Y2H9 1570 aa19.35■□□□□ 0.69
SCNM1-205ENST00000471039 ADAMTSL3P82987 1691 aa19.34■□□□□ 0.69
SCNM1-205ENST00000471039 PLXNC1O60486 1568 aa19.33■□□□□ 0.69
SCNM1-205ENST00000471039 HNRNPMP52272 730 aaKnown RBP eCLIP19.33■□□□□ 0.68
SCNM1-205ENST00000471039 ATP10AO60312 1499 aa19.32■□□□□ 0.68
SCNM1-205ENST00000471039 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
SCNM1-205ENST00000471039 MADDQ8WXG6 1647 aa19.3■□□□□ 0.68
SCNM1-205ENST00000471039 SHANK2Q9UPX8 1470 aa19.28■□□□□ 0.68
SCNM1-205ENST00000471039 SPAG9O60271 1321 aaKnown RBP19.27■□□□□ 0.68
SCNM1-205ENST00000471039 AGLP35573 1532 aa19.27■□□□□ 0.68
SCNM1-205ENST00000471039 RIMS1Q86UR5 1692 aaKnown RBP19.27■□□□□ 0.67
SCNM1-205ENST00000471039 RTEL1-TNFRSF6BF6WH68 1400 aa19.26■□□□□ 0.67
SCNM1-205ENST00000471039 MYT1LQ9UL68 1186 aa19.23■□□□□ 0.67
SCNM1-205ENST00000471039 DAPK1P53355 1430 aa19.23■□□□□ 0.67
SCNM1-205ENST00000471039 A2MP01023 1474 aa19.22■□□□□ 0.67
SCNM1-205ENST00000471039 KDM4FA0A1W2PPD8 638 aa19.22■□□□□ 0.67
SCNM1-205ENST00000471039 ABCC5O15440 1437 aa19.21■□□□□ 0.67
SCNM1-205ENST00000471039 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
SCNM1-205ENST00000471039 EIF2AK4Q9P2K8 1649 aaKnown RBP19.2■□□□□ 0.66
SCNM1-205ENST00000471039 RSPH4AQ5TD94 716 aa19.19■□□□□ 0.66
SCNM1-205ENST00000471039 ARID4BQ4LE39 1312 aaPredicted RBP19.18■□□□□ 0.66
SCNM1-205ENST00000471039 RNF17Q9BXT8 1623 aaKnown RBP19.16■□□□□ 0.66
SCNM1-205ENST00000471039 RRBP1Q9P2E9 1410 aaKnown RBP19.16■□□□□ 0.66
SCNM1-205ENST00000471039 MROH2AA6NES4 1674 aa19.15■□□□□ 0.66
SCNM1-205ENST00000471039 ADGRL2O95490 1459 aa19.15■□□□□ 0.66
SCNM1-205ENST00000471039 DUOX2Q9NRD8 1548 aa19.13■□□□□ 0.65
SCNM1-205ENST00000471039 CLTCQ00610 1675 aaKnown RBP19.13■□□□□ 0.65
SCNM1-205ENST00000471039 C3P01024 1663 aa19.12■□□□□ 0.65
SCNM1-205ENST00000471039 PTPRMP28827 1452 aa19.12■□□□□ 0.65
SCNM1-205ENST00000471039 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
SCNM1-205ENST00000471039 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
SCNM1-205ENST00000471039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
SCNM1-205ENST00000471039 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
SCNM1-205ENST00000471039 MROH1Q8NDA8 1641 aa19.11■□□□□ 0.65
SCNM1-205ENST00000471039 DHX29Q7Z478 1369 aaKnown RBP19.1■□□□□ 0.65
SCNM1-205ENST00000471039 DEPDC5O75140 1603 aa19.1■□□□□ 0.65
SCNM1-205ENST00000471039 ZC3H13Q5T200 1668 aaKnown RBP19.09■□□□□ 0.65
SCNM1-205ENST00000471039 KIF15Q9NS87 1388 aa19.08■□□□□ 0.65
SCNM1-205ENST00000471039 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.64
SCNM1-205ENST00000471039 MLECQ14165 292 aa19.07■□□□□ 0.64
SCNM1-205ENST00000471039 CEP152O94986 1710 aa19.07■□□□□ 0.64
SCNM1-205ENST00000471039 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
SCNM1-205ENST00000471039 ERBINQ96RT1 1412 aa19.07■□□□□ 0.64
SCNM1-205ENST00000471039 PRDM15P57071 1507 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms