RNA–Protein interactions for RNA: ENST00000470638.3

PRIM2-204, Transcript of DNA primase subunit 2, humanhuman

TSL 5

Gene PRIM2, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2-204ENST00000470638 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
PRIM2-204ENST00000470638 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
PRIM2-204ENST00000470638 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
PRIM2-204ENST00000470638 DDX27Q96GQ7 796 aaKnown RBP12.23□□□□□ -0.45
PRIM2-204ENST00000470638 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
PRIM2-204ENST00000470638 C2orf72A6NCS6 295 aa12.2□□□□□ -0.46
PRIM2-204ENST00000470638 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
PRIM2-204ENST00000470638 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
PRIM2-204ENST00000470638 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
PRIM2-204ENST00000470638 PPP1R15BQ5SWA1 713 aa12.18□□□□□ -0.46
PRIM2-204ENST00000470638 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
PRIM2-204ENST00000470638 MAMSTRQ6ZN01 415 aa12.16□□□□□ -0.46
PRIM2-204ENST00000470638 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
PRIM2-204ENST00000470638 DSG2Q14126 1118 aa12.15□□□□□ -0.46
PRIM2-204ENST00000470638 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
PRIM2-204ENST00000470638 MFSD10Q14728 455 aa12.14□□□□□ -0.47
PRIM2-204ENST00000470638 E2F4Q16254 413 aa12.12□□□□□ -0.47
PRIM2-204ENST00000470638 PLPP6Q8IY26 295 aa12.12□□□□□ -0.47
PRIM2-204ENST00000470638 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
PRIM2-204ENST00000470638 KIF3CO14782 793 aa12.11□□□□□ -0.47
PRIM2-204ENST00000470638 FOXK1P85037 733 aa12.11□□□□□ -0.47
PRIM2-204ENST00000470638 LHX8Q68G74 356 aa12.1□□□□□ -0.47
PRIM2-204ENST00000470638 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
PRIM2-204ENST00000470638 NBR1Q14596 966 aa12.06□□□□□ -0.48
PRIM2-204ENST00000470638 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
PRIM2-204ENST00000470638 BCANQ96GW7 911 aa12.01□□□□□ -0.49
PRIM2-204ENST00000470638 CAMK2BQ13554 666 aa11.99□□□□□ -0.49
PRIM2-204ENST00000470638 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
PRIM2-204ENST00000470638 DPYSL4O14531 572 aa11.98□□□□□ -0.49
PRIM2-204ENST00000470638 EMILIN3Q9NT22 766 aa11.98□□□□□ -0.49
PRIM2-204ENST00000470638 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
PRIM2-204ENST00000470638 ARHGEF1Q92888 912 aaKnown RBP11.96□□□□□ -0.49
PRIM2-204ENST00000470638 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
PRIM2-204ENST00000470638 RIMBP2O15034 1052 aa11.94□□□□□ -0.5
PRIM2-204ENST00000470638 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
PRIM2-204ENST00000470638 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
PRIM2-204ENST00000470638 TBC1D12O60347 775 aa11.92□□□□□ -0.5
PRIM2-204ENST00000470638 SNPHO15079 494 aa11.9□□□□□ -0.5
PRIM2-204ENST00000470638 OXER1Q8TDS5 423 aa11.9□□□□□ -0.5
PRIM2-204ENST00000470638 SLC34A2O95436 690 aa11.87□□□□□ -0.51
PRIM2-204ENST00000470638 PCDHGA4Q9Y5G9 962 aa11.87□□□□□ -0.51
PRIM2-204ENST00000470638 SEMA3EO15041 775 aa11.86□□□□□ -0.51
PRIM2-204ENST00000470638 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
PRIM2-204ENST00000470638 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
PRIM2-204ENST00000470638 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
PRIM2-204ENST00000470638 SPDYE16A6NNV3 312 aaPredicted RBP11.84□□□□□ -0.51
PRIM2-204ENST00000470638 EVI5O60447 810 aa11.84□□□□□ -0.51
PRIM2-204ENST00000470638 PDIA6Q15084 440 aa11.84□□□□□ -0.51
PRIM2-204ENST00000470638 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
PRIM2-204ENST00000470638 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
PRIM2-204ENST00000470638 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
PRIM2-204ENST00000470638 KHSRPQ92945 711 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRIM2-204ENST00000470638 NUDT7P0C024 238 aa11.81□□□□□ -0.52
PRIM2-204ENST00000470638 GRXCR2A6NFK2 248 aa11.79□□□□□ -0.52
PRIM2-204ENST00000470638 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
PRIM2-204ENST00000470638 DDX12PQ92771 950 aa11.78□□□□□ -0.52
PRIM2-204ENST00000470638 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
PRIM2-204ENST00000470638 TESPA1A2RU30 521 aaPredicted RBP11.76□□□□□ -0.53
PRIM2-204ENST00000470638 MLLT3P42568 568 aaPredicted RBP11.76□□□□□ -0.53
PRIM2-204ENST00000470638 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
PRIM2-204ENST00000470638 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
PRIM2-204ENST00000470638 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
PRIM2-204ENST00000470638 ST18O60284 1047 aa11.69□□□□□ -0.54
PRIM2-204ENST00000470638 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
PRIM2-204ENST00000470638 ZNF454Q8N9F8 522 aa11.69□□□□□ -0.54
PRIM2-204ENST00000470638 LHX6Q9UPM6 363 aa11.69□□□□□ -0.54
PRIM2-204ENST00000470638 EMP3P54852 163 aa11.67□□□□□ -0.54
PRIM2-204ENST00000470638 ANO8Q9HCE9 1232 aaPredicted RBP11.67□□□□□ -0.54
PRIM2-204ENST00000470638 PTGER2P43116 358 aa11.66□□□□□ -0.54
PRIM2-204ENST00000470638 MARVELD3Q96A59 401 aa11.66□□□□□ -0.54
PRIM2-204ENST00000470638 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
PRIM2-204ENST00000470638 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
PRIM2-204ENST00000470638 ERBB3P21860 1342 aa11.64□□□□□ -0.55
PRIM2-204ENST00000470638 PHF14O94880 888 aa11.64□□□□□ -0.55
PRIM2-204ENST00000470638 RBM26Q5T8P6 1007 aaKnown RBP11.64□□□□□ -0.55
PRIM2-204ENST00000470638 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
PRIM2-204ENST00000470638 MAP3K7O43318 606 aa11.63□□□□□ -0.55
PRIM2-204ENST00000470638 PPP4R3BQ5MIZ7 849 aa11.63□□□□□ -0.55
PRIM2-204ENST00000470638 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
PRIM2-204ENST00000470638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.63□□□□□ -0.55
PRIM2-204ENST00000470638 EPAS1Q99814 870 aa11.63□□□□□ -0.55
PRIM2-204ENST00000470638 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
PRIM2-204ENST00000470638 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
PRIM2-204ENST00000470638 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
PRIM2-204ENST00000470638 GPIHBP1Q8IV16 184 aa11.61□□□□□ -0.55
PRIM2-204ENST00000470638 OSBPP22059 807 aa11.6□□□□□ -0.55
PRIM2-204ENST00000470638 FOSBP53539 338 aa11.6□□□□□ -0.55
PRIM2-204ENST00000470638 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
PRIM2-204ENST00000470638 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
PRIM2-204ENST00000470638 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
PRIM2-204ENST00000470638 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
PRIM2-204ENST00000470638 EN1Q05925 392 aaPredicted RBP11.59□□□□□ -0.55
PRIM2-204ENST00000470638 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
PRIM2-204ENST00000470638 PRIM1P49642 420 aaKnown RBP11.55□□□□□ -0.56
PRIM2-204ENST00000470638 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
PRIM2-204ENST00000470638 TSR1Q2NL82 804 aaKnown RBP11.54□□□□□ -0.56
PRIM2-204ENST00000470638 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
PRIM2-204ENST00000470638 CDHR5Q9HBB8 845 aa11.53□□□□□ -0.56
PRIM2-204ENST00000470638 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
PRIM2-204ENST00000470638 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms