RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 SPRYD3Q8NCJ5 442 aa14.49□□□□□ -0.09
SSB-209ENST00000470621 NLRP6P59044 892 aa14.48□□□□□ -0.09
SSB-209ENST00000470621 PPP1R37O75864 691 aa14.44□□□□□ -0.1
SSB-209ENST00000470621 DPY19L2Q6NUT2 758 aa14.44□□□□□ -0.1
SSB-209ENST00000470621 MARVELD3Q96A59 401 aa14.4□□□□□ -0.1
SSB-209ENST00000470621 RYDENQ9NUL5 291 aaKnown RBP14.39□□□□□ -0.11
SSB-209ENST00000470621 BOLA1Q9Y3E2 137 aa14.36□□□□□ -0.11
SSB-209ENST00000470621 G3V3G9 751 aa14.34□□□□□ -0.11
SSB-209ENST00000470621 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
SSB-209ENST00000470621 EMP3P54852 163 aa14.31□□□□□ -0.12
SSB-209ENST00000470621 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
SSB-209ENST00000470621 SPNS2Q8IVW8 549 aa14.27□□□□□ -0.13
SSB-209ENST00000470621 MICALL2Q8IY33 904 aa14.25□□□□□ -0.13
SSB-209ENST00000470621 CADPS2Q86UW7 1296 aa14.24□□□□□ -0.13
SSB-209ENST00000470621 MMRN1Q13201 1228 aa14.23□□□□□ -0.13
SSB-209ENST00000470621 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
SSB-209ENST00000470621 HS3ST6Q96QI5 342 aa14.22□□□□□ -0.13
SSB-209ENST00000470621 FAM205CA6NFA0 338 aa14.2□□□□□ -0.14
SSB-209ENST00000470621 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
SSB-209ENST00000470621 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
SSB-209ENST00000470621 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
SSB-209ENST00000470621 KRTAP3-3Q9BYR6 98 aa14.15□□□□□ -0.14
SSB-209ENST00000470621 KRTAP3-2Q9BYR7 98 aa14.15□□□□□ -0.14
SSB-209ENST00000470621 DOK7Q18PE1 504 aa14.14□□□□□ -0.15
SSB-209ENST00000470621 ZNF710Q8N1W2 664 aa14.14□□□□□ -0.15
SSB-209ENST00000470621 HOXB1P14653 301 aaPredicted RBP14.13□□□□□ -0.15
SSB-209ENST00000470621 TMEM92Q6UXU6 159 aa14.11□□□□□ -0.15
SSB-209ENST00000470621 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
SSB-209ENST00000470621 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
SSB-209ENST00000470621 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
SSB-209ENST00000470621 CRISPLD2Q9H0B8 497 aa14.06□□□□□ -0.16
SSB-209ENST00000470621 ERBB3P21860 1342 aa14.02□□□□□ -0.17
SSB-209ENST00000470621 C2orf72A6NCS6 295 aa14.02□□□□□ -0.17
SSB-209ENST00000470621 KIF3CO14782 793 aa14.01□□□□□ -0.17
SSB-209ENST00000470621 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
SSB-209ENST00000470621 LARP6Q9BRS8 491 aaKnown RBP14□□□□□ -0.17
SSB-209ENST00000470621 ZSWIM6Q9HCJ5 1215 aa14□□□□□ -0.17
SSB-209ENST00000470621 GPHNQ9NQX3 736 aaPredicted RBP13.99□□□□□ -0.17
SSB-209ENST00000470621 PDE4AP27815 886 aa13.97□□□□□ -0.17
SSB-209ENST00000470621 TMC2Q8TDI7 906 aa13.97□□□□□ -0.17
SSB-209ENST00000470621 DSG2Q14126 1118 aa13.95□□□□□ -0.18
SSB-209ENST00000470621 MFSD10Q14728 455 aa13.95□□□□□ -0.18
SSB-209ENST00000470621 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
SSB-209ENST00000470621 DDX27Q96GQ7 796 aaKnown RBP13.93□□□□□ -0.18
SSB-209ENST00000470621 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
SSB-209ENST00000470621 FOXK1P85037 733 aa13.91□□□□□ -0.18
SSB-209ENST00000470621 PPP1R15BQ5SWA1 713 aa13.91□□□□□ -0.18
SSB-209ENST00000470621 WDR70Q9NW82 654 aa13.88□□□□□ -0.19
SSB-209ENST00000470621 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
SSB-209ENST00000470621 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
SSB-209ENST00000470621 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
SSB-209ENST00000470621 KCNV2Q8TDN2 545 aa13.81□□□□□ -0.2
SSB-209ENST00000470621 CAMK2BQ13554 666 aa13.79□□□□□ -0.2
SSB-209ENST00000470621 E2F4Q16254 413 aa13.79□□□□□ -0.2
SSB-209ENST00000470621 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
SSB-209ENST00000470621 RNF166Q96A37 237 aaPredicted RBP13.76□□□□□ -0.21
SSB-209ENST00000470621 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
SSB-209ENST00000470621 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.211e-7■■□□□ 13.1
SSB-209ENST00000470621 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
SSB-209ENST00000470621 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
SSB-209ENST00000470621 PTGER2P43116 358 aa13.69□□□□□ -0.22
SSB-209ENST00000470621 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
SSB-209ENST00000470621 DPYSL4O14531 572 aa13.68□□□□□ -0.22
SSB-209ENST00000470621 SLC34A2O95436 690 aa13.68□□□□□ -0.22
SSB-209ENST00000470621 OXER1Q8TDS5 423 aa13.68□□□□□ -0.22
SSB-209ENST00000470621 PTCD2Q8WV60 388 aaKnown RBP13.66□□□□□ -0.22
SSB-209ENST00000470621 NUDT7P0C024 238 aa13.64□□□□□ -0.23
SSB-209ENST00000470621 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
SSB-209ENST00000470621 ARHGEF1Q92888 912 aaKnown RBP13.63□□□□□ -0.23
SSB-209ENST00000470621 PCDHGA4Q9Y5G9 962 aa13.63□□□□□ -0.23
SSB-209ENST00000470621 ARIH1Q9Y4X5 557 aaPredicted RBP13.62□□□□□ -0.23
SSB-209ENST00000470621 LSM11P83369 360 aaKnown RBP eCLIP13.61□□□□□ -0.23
SSB-209ENST00000470621 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
SSB-209ENST00000470621 PBX2P40425 430 aa13.59□□□□□ -0.23
SSB-209ENST00000470621 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
SSB-209ENST00000470621 PDIA6Q15084 440 aa13.56□□□□□ -0.24
SSB-209ENST00000470621 KDM4FA0A1W2PPD8 638 aa13.54□□□□□ -0.24
SSB-209ENST00000470621 TBC1D12O60347 775 aa13.54□□□□□ -0.24
SSB-209ENST00000470621 EVI5O60447 810 aa13.54□□□□□ -0.24
SSB-209ENST00000470621 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
SSB-209ENST00000470621 SEMA3EO15041 775 aa13.52□□□□□ -0.25
SSB-209ENST00000470621 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
SSB-209ENST00000470621 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
SSB-209ENST00000470621 SPDYE16A6NNV3 312 aaPredicted RBP13.48□□□□□ -0.25
SSB-209ENST00000470621 NBR1Q14596 966 aa13.48□□□□□ -0.25
SSB-209ENST00000470621 MLLT3P42568 568 aaPredicted RBP13.47□□□□□ -0.25
SSB-209ENST00000470621 ANO8Q9HCE9 1232 aaPredicted RBP13.46□□□□□ -0.25
SSB-209ENST00000470621 DDX12PQ92771 950 aa13.44□□□□□ -0.26
SSB-209ENST00000470621 BCANQ96GW7 911 aa13.43□□□□□ -0.26
SSB-209ENST00000470621 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
SSB-209ENST00000470621 ARHGAP33O14559 1287 aa13.42□□□□□ -0.26
SSB-209ENST00000470621 GRXCR2A6NFK2 248 aa13.39□□□□□ -0.27
SSB-209ENST00000470621 ADGRD1Q6QNK2 874 aa13.39□□□□□ -0.27
SSB-209ENST00000470621 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
SSB-209ENST00000470621 ZNF454Q8N9F8 522 aa13.35□□□□□ -0.27
SSB-209ENST00000470621 PCDHGA10Q9Y5H3 936 aa13.35□□□□□ -0.27
SSB-209ENST00000470621 TK2O00142 265 aa13.34□□□□□ -0.27
SSB-209ENST00000470621 FOSBP53539 338 aa13.34□□□□□ -0.27
SSB-209ENST00000470621 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
SSB-209ENST00000470621 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms