RNA–Protein interactions for RNA: ENST00000470581.1

SEMA3C-207, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-207ENST00000470581 PREX2Q70Z35 1606 aa39.08■■■■□ 3.85
SEMA3C-207ENST00000470581 TIAM1Q13009 1591 aa39.06■■■■□ 3.84
SEMA3C-207ENST00000470581 CDC42BPAQ5VT25 1732 aa39.06■■■■□ 3.84
SEMA3C-207ENST00000470581 SCAPERQ9BY12 1400 aa39.06■■■■□ 3.84
SEMA3C-207ENST00000470581 RICTORQ6R327 1708 aa39.05■■■■□ 3.84
SEMA3C-207ENST00000470581 GPATCH8Q9UKJ3 1502 aaKnown RBP38.99■■■■□ 3.83
SEMA3C-207ENST00000470581 CCNB3Q8WWL7 1395 aa38.97■■■■□ 3.83
SEMA3C-207ENST00000470581 POGZQ7Z3K3 1410 aa38.95■■■■□ 3.83
SEMA3C-207ENST00000470581 MAP3K1Q13233 1512 aa38.94■■■■□ 3.82
SEMA3C-207ENST00000470581 AEBP2Q6ZN18 517 aaPredicted RBP38.91■■■■□ 3.82
SEMA3C-207ENST00000470581 LRRC9Q6ZRR7 1453 aa38.91■■■■□ 3.82
SEMA3C-207ENST00000470581 ZMYM4Q5VZL5 1548 aa38.9■■■■□ 3.82
SEMA3C-207ENST00000470581 SUPT6HQ7KZ85 1726 aaKnown RBP38.9■■■■□ 3.82
SEMA3C-207ENST00000470581 ZNF777Q9ULD5 760 aaPredicted RBP38.9■■■■□ 3.82
SEMA3C-207ENST00000470581 KDM4FA0A1W2PPD8 638 aa38.88■■■■□ 3.81
SEMA3C-207ENST00000470581 CFDP1Q9UEE9 299 aaPredicted RBP38.88■■■■□ 3.81
SEMA3C-207ENST00000470581 APLP2Q06481 763 aa38.87■■■■□ 3.81
SEMA3C-207ENST00000470581 ABCC1P33527 1531 aa38.86■■■■□ 3.81
SEMA3C-207ENST00000470581 NCOA2Q15596 1464 aa38.86■■■■□ 3.81
SEMA3C-207ENST00000470581 ZNF518AQ6AHZ1 1483 aa38.85■■■■□ 3.81
SEMA3C-207ENST00000470581 KANK4Q5T7N3 995 aaPredicted RBP38.84■■■■□ 3.81
SEMA3C-207ENST00000470581 MAGI2Q86UL8 1455 aa38.83■■■■□ 3.81
SEMA3C-207ENST00000470581 ARHGEF40Q8TER5 1519 aa38.83■■■■□ 3.81
SEMA3C-207ENST00000470581 ITSN2Q9NZM3 1697 aa38.82■■■■□ 3.81
SEMA3C-207ENST00000470581 AFAP1Q8N556 730 aa38.82■■■■□ 3.8
SEMA3C-207ENST00000470581 SAMD9LQ8IVG5 1584 aa38.82■■■■□ 3.8
SEMA3C-207ENST00000470581 ARHGEF12Q9NZN5 1544 aa38.81■■■■□ 3.8
SEMA3C-207ENST00000470581 ZFYVE16Q7Z3T8 1539 aa38.8■■■■□ 3.8
SEMA3C-207ENST00000470581 YEATS2Q9ULM3 1422 aa38.78■■■■□ 3.8
SEMA3C-207ENST00000470581 KDM5CP41229 1560 aa38.76■■■■□ 3.8
SEMA3C-207ENST00000470581 TRAPPC8Q9Y2L5 1435 aa38.76■■■■□ 3.8
SEMA3C-207ENST00000470581 PLEKHH2Q8IVE3 1493 aa38.73■■■■□ 3.79
SEMA3C-207ENST00000470581 SYCP2Q9BX26 1530 aa38.73■■■■□ 3.79
SEMA3C-207ENST00000470581 MYT1LQ9UL68 1186 aa38.72■■■■□ 3.79
SEMA3C-207ENST00000470581 HNRNPMP52272 730 aaKnown RBP eCLIP38.71■■■■□ 3.79
SEMA3C-207ENST00000470581 KIAA1107Q9UPP5 1409 aa38.7■■■■□ 3.79
SEMA3C-207ENST00000470581 ARID4BQ4LE39 1312 aaPredicted RBP38.69■■■■□ 3.78
SEMA3C-207ENST00000470581 HECW2Q9P2P5 1572 aa38.68■■■■□ 3.78
SEMA3C-207ENST00000470581 ZNF644Q9H582 1327 aaPredicted RBP38.67■■■■□ 3.78
SEMA3C-207ENST00000470581 MLH3Q9UHC1 1453 aa38.64■■■■□ 3.78
SEMA3C-207ENST00000470581 ATP10AO60312 1499 aa38.63■■■■□ 3.77
SEMA3C-207ENST00000470581 C9orf84Q5VXU9 1444 aa38.57■■■■□ 3.77
SEMA3C-207ENST00000470581 SPAG9O60271 1321 aaKnown RBP38.56■■■■□ 3.76
SEMA3C-207ENST00000470581 CAMSAP2Q08AD1 1489 aa38.55■■■■□ 3.76
SEMA3C-207ENST00000470581 DIP2CQ9Y2E4 1556 aa38.55■■■■□ 3.76
SEMA3C-207ENST00000470581 BCORL1Q5H9F3 1711 aa38.55■■■■□ 3.76
SEMA3C-207ENST00000470581 SIGLEC1Q9BZZ2 1709 aa38.55■■■■□ 3.76
SEMA3C-207ENST00000470581 KIDINS220Q9ULH0 1771 aa38.54■■■■□ 3.76
SEMA3C-207ENST00000470581 MBD5Q9P267 1494 aa38.54■■■■□ 3.76
SEMA3C-207ENST00000470581 ABCA6Q8N139 1617 aa38.53■■■■□ 3.76
SEMA3C-207ENST00000470581 MYOM3Q5VTT5 1437 aa38.53■■■■□ 3.76
SEMA3C-207ENST00000470581 ADAMTSL3P82987 1691 aa38.5■■■■□ 3.75
SEMA3C-207ENST00000470581 MIA2Q96PC5 1412 aa38.47■■■■□ 3.75
SEMA3C-207ENST00000470581 ATP7AQ04656 1500 aa38.45■■■■□ 3.75
SEMA3C-207ENST00000470581 REREQ9P2R6 1566 aa38.44■■■■□ 3.74
SEMA3C-207ENST00000470581 MLECQ14165 292 aa38.43■■■■□ 3.74
SEMA3C-207ENST00000470581 INO80Q9ULG1 1556 aaPredicted RBP38.43■■■■□ 3.74
SEMA3C-207ENST00000470581 RSPH4AQ5TD94 716 aa38.42■■■■□ 3.74
SEMA3C-207ENST00000470581 CCDC141Q6ZP82 1450 aa38.41■■■■□ 3.74
SEMA3C-207ENST00000470581 MADDQ8WXG6 1647 aa38.4■■■■□ 3.74
SEMA3C-207ENST00000470581 ARHGEF5Q12774 1597 aa38.37■■■■□ 3.73
SEMA3C-207ENST00000470581 RTEL1-TNFRSF6BF6WH68 1400 aa38.34■■■■□ 3.73
SEMA3C-207ENST00000470581 AGLP35573 1532 aa38.32■■■■□ 3.72
SEMA3C-207ENST00000470581 PTPRMP28827 1452 aa38.31■■■■□ 3.72
SEMA3C-207ENST00000470581 PTPN23Q9H3S7 1636 aa38.3■■■■□ 3.72
SEMA3C-207ENST00000470581 FGD6Q6ZV73 1430 aa38.3■■■■□ 3.72
SEMA3C-207ENST00000470581 TSPY4P0CV99 314 aa38.3■■■■□ 3.72
SEMA3C-207ENST00000470581 TSPY10P0CW01 314 aa38.3■■■■□ 3.72
SEMA3C-207ENST00000470581 RIMS1Q86UR5 1692 aaKnown RBP38.3■■■■□ 3.72
SEMA3C-207ENST00000470581 A2MP01023 1474 aa38.27■■■■□ 3.72
SEMA3C-207ENST00000470581 ADGBQ8N7X0 1667 aa38.26■■■■□ 3.71
SEMA3C-207ENST00000470581 FER1L4A9Z1Z3 1794 aa38.26■■■■□ 3.71
SEMA3C-207ENST00000470581 PLXNC1O60486 1568 aa38.21■■■■□ 3.71
SEMA3C-207ENST00000470581 PPARGC1BQ86YN6 1023 aaKnown RBP38.2■■■■□ 3.71
SEMA3C-207ENST00000470581 TCOF1Q13428 1488 aaKnown RBP38.2■■■■□ 3.71
SEMA3C-207ENST00000470581 MAST1Q9Y2H9 1570 aa38.16■■■■□ 3.7
SEMA3C-207ENST00000470581 DHX29Q7Z478 1369 aaKnown RBP38.15■■■■□ 3.7
SEMA3C-207ENST00000470581 PLPPR3Q6T4P5 718 aa38.13■■■■□ 3.69
SEMA3C-207ENST00000470581 ABCC5O15440 1437 aa38.12■■■■□ 3.69
SEMA3C-207ENST00000470581 ESF1Q9H501 851 aaKnown RBP38.11■■■■□ 3.69
SEMA3C-207ENST00000470581 DNMT1P26358 1616 aaKnown RBP38.09■■■■□ 3.69
SEMA3C-207ENST00000470581 FAM50AQ14320 339 aaKnown RBP38.09■■■■□ 3.69
SEMA3C-207ENST00000470581 DAPK1P53355 1430 aa38.08■■■■□ 3.69
SEMA3C-207ENST00000470581 CROCC2H7BZ55 1655 aa38.07■■■■□ 3.69
SEMA3C-207ENST00000470581 SHANK2Q9UPX8 1470 aa38.05■■■■□ 3.68
SEMA3C-207ENST00000470581 GGT6Q6P531 493 aa38.05■■■■□ 3.68
SEMA3C-207ENST00000470581 KIF3BO15066 747 aa38.01■■■■□ 3.68
SEMA3C-207ENST00000470581 CNTLNQ9NXG0 1405 aa37.99■■■■□ 3.67
SEMA3C-207ENST00000470581 CEBPAP49715 358 aaPredicted RBP37.99■■■■□ 3.67
SEMA3C-207ENST00000470581 CHIC2Q9UKJ5 165 aa37.95■■■■□ 3.67
SEMA3C-207ENST00000470581 PPP6R1Q9UPN7 881 aa37.94■■■■□ 3.66
SEMA3C-207ENST00000470581 C3P01024 1663 aa37.92■■■■□ 3.66
SEMA3C-207ENST00000470581 RRP7BPQ9NSQ0 103 aa37.92■■■■□ 3.66
SEMA3C-207ENST00000470581 KIF15Q9NS87 1388 aa37.92■■■■□ 3.66
SEMA3C-207ENST00000470581 DUOX2Q9NRD8 1548 aa37.92■■■■□ 3.66
SEMA3C-207ENST00000470581 CLTCQ00610 1675 aaKnown RBP37.91■■■■□ 3.66
SEMA3C-207ENST00000470581 MROH2AA6NES4 1674 aa37.89■■■■□ 3.66
SEMA3C-207ENST00000470581 ANKRD30AQ9BXX3 1397 aa37.88■■■■□ 3.65
SEMA3C-207ENST00000470581 ZMYM3Q14202 1370 aa37.86■■■■□ 3.65
SEMA3C-207ENST00000470581 EIF2AK4Q9P2K8 1649 aaKnown RBP37.86■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms