RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 PDCD7Q8N8D1 485 aaKnown RBP11.36□□□□□ -0.59
RBM39-227ENST00000470563 GALR2O43603 387 aaPredicted RBP11.35□□□□□ -0.59
RBM39-227ENST00000470563 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
RBM39-227ENST00000470563 ERICH6Q7L0X2 663 aa11.35□□□□□ -0.59
RBM39-227ENST00000470563 SPDYE16A6NNV3 312 aaPredicted RBP11.34□□□□□ -0.59
RBM39-227ENST00000470563 ZMYND10O75800 440 aa11.34□□□□□ -0.59
RBM39-227ENST00000470563 FOXK1P85037 733 aa11.34□□□□□ -0.59
RBM39-227ENST00000470563 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
RBM39-227ENST00000470563 MICALL2Q8IY33 904 aa11.33□□□□□ -0.6
RBM39-227ENST00000470563 PDIA6Q15084 440 aa11.31□□□□□ -0.6
RBM39-227ENST00000470563 OCEL1Q9H607 264 aa11.3□□□□□ -0.6
RBM39-227ENST00000470563 KIF3CO14782 793 aa11.29□□□□□ -0.6
RBM39-227ENST00000470563 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
RBM39-227ENST00000470563 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
RBM39-227ENST00000470563 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
RBM39-227ENST00000470563 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
RBM39-227ENST00000470563 DSG2Q14126 1118 aa11.26□□□□□ -0.61
RBM39-227ENST00000470563 EMILIN3Q9NT22 766 aa11.26□□□□□ -0.61
RBM39-227ENST00000470563 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
RBM39-227ENST00000470563 BOLA1Q9Y3E2 137 aa11.25□□□□□ -0.61
RBM39-227ENST00000470563 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
RBM39-227ENST00000470563 GTF3C3Q9Y5Q9 886 aa11.24□□□□□ -0.61
RBM39-227ENST00000470563 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
RBM39-227ENST00000470563 SLC24A3Q9HC58 644 aa11.2□□□□□ -0.62
RBM39-227ENST00000470563 DAXXQ9UER7 740 aaPredicted RBP11.2□□□□□ -0.62
RBM39-227ENST00000470563 DPYSL4O14531 572 aa11.18□□□□□ -0.62
RBM39-227ENST00000470563 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
RBM39-227ENST00000470563 C2orf72A6NCS6 295 aa11.17□□□□□ -0.62
RBM39-227ENST00000470563 GPIHBP1Q8IV16 184 aa11.17□□□□□ -0.62
RBM39-227ENST00000470563 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
RBM39-227ENST00000470563 PLCG2P16885 1265 aa11.16□□□□□ -0.62
RBM39-227ENST00000470563 G3V3G9 751 aa11.15□□□□□ -0.62
RBM39-227ENST00000470563 PTGER2P43116 358 aa11.15□□□□□ -0.62
RBM39-227ENST00000470563 AK7Q96M32 723 aa11.15□□□□□ -0.62
RBM39-227ENST00000470563 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
RBM39-227ENST00000470563 GPR37O15354 613 aa11.12□□□□□ -0.63
RBM39-227ENST00000470563 GABBR2O75899 941 aa11.12□□□□□ -0.63
RBM39-227ENST00000470563 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
RBM39-227ENST00000470563 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
RBM39-227ENST00000470563 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
RBM39-227ENST00000470563 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
RBM39-227ENST00000470563 C7P10643 843 aa11.07□□□□□ -0.64
RBM39-227ENST00000470563 TMEM92Q6UXU6 159 aa11.07□□□□□ -0.64
RBM39-227ENST00000470563 SLC34A2O95436 690 aa11.06□□□□□ -0.64
RBM39-227ENST00000470563 MAP3K9P80192 1104 aa11.06□□□□□ -0.64
RBM39-227ENST00000470563 PTCD2Q8WV60 388 aaKnown RBP11.05□□□□□ -0.64
RBM39-227ENST00000470563 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
RBM39-227ENST00000470563 OSBPP22059 807 aa11.02□□□□□ -0.65
RBM39-227ENST00000470563 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
RBM39-227ENST00000470563 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
RBM39-227ENST00000470563 TRIM66O15016 1216 aa11.01□□□□□ -0.65
RBM39-227ENST00000470563 TBC1D12O60347 775 aa11.01□□□□□ -0.65
RBM39-227ENST00000470563 SEC24BO95487 1268 aa11.01□□□□□ -0.65
RBM39-227ENST00000470563 DCBLD2Q96PD2 775 aa11.01□□□□□ -0.65
RBM39-227ENST00000470563 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
RBM39-227ENST00000470563 POTEFA5A3E0 1075 aa11□□□□□ -0.65
RBM39-227ENST00000470563 MAP2K5Q13163 448 aa11□□□□□ -0.65
RBM39-227ENST00000470563 HIC1Q14526 733 aa10.99□□□□□ -0.65
RBM39-227ENST00000470563 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
RBM39-227ENST00000470563 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
RBM39-227ENST00000470563 PDE4DQ08499 809 aa10.97□□□□□ -0.65
RBM39-227ENST00000470563 AMHR2Q16671 573 aa10.97□□□□□ -0.65
RBM39-227ENST00000470563 GNPATO15228 680 aa10.96□□□□□ -0.65
RBM39-227ENST00000470563 FCHSD2O94868 740 aa10.96□□□□□ -0.65
RBM39-227ENST00000470563 GRXCR2A6NFK2 248 aa10.94□□□□□ -0.66
RBM39-227ENST00000470563 EVI5O60447 810 aa10.94□□□□□ -0.66
RBM39-227ENST00000470563 KDM4CQ9H3R0 1056 aa10.94□□□□□ -0.66
RBM39-227ENST00000470563 IRF6O14896 467 aa10.93□□□□□ -0.66
RBM39-227ENST00000470563 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
RBM39-227ENST00000470563 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
RBM39-227ENST00000470563 C3orf67Q6ZVT6 689 aa10.92□□□□□ -0.66
RBM39-227ENST00000470563 UPF1Q92900 1129 aaKnown RBP eCLIP10.92□□□□□ -0.66
RBM39-227ENST00000470563 EPAS1Q99814 870 aa10.92□□□□□ -0.66
RBM39-227ENST00000470563 PHF14O94880 888 aa10.9□□□□□ -0.66
RBM39-227ENST00000470563 PTGDRQ13258 359 aa10.9□□□□□ -0.66
RBM39-227ENST00000470563 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
RBM39-227ENST00000470563 GPBP1L1Q9HC44 474 aaPredicted RBP10.9□□□□□ -0.66
RBM39-227ENST00000470563 NUTM2FA1L443 756 aa10.89□□□□□ -0.67
RBM39-227ENST00000470563 C14orf37Q86TY3 774 aa10.87□□□□□ -0.67
RBM39-227ENST00000470563 KDM4FA0A1W2PPD8 638 aa10.86□□□□□ -0.67
RBM39-227ENST00000470563 PRIM1P49642 420 aaKnown RBP10.86□□□□□ -0.67
RBM39-227ENST00000470563 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
RBM39-227ENST00000470563 DDX12PQ92771 950 aa10.86□□□□□ -0.67
RBM39-227ENST00000470563 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
RBM39-227ENST00000470563 GOPCQ9HD26 462 aa10.85□□□□□ -0.67
RBM39-227ENST00000470563 PARP9Q8IXQ6 854 aa10.82□□□□□ -0.68
RBM39-227ENST00000470563 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
RBM39-227ENST00000470563 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.82□□□□□ -0.68
RBM39-227ENST00000470563 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
RBM39-227ENST00000470563 NPDC1Q9NQX5 325 aaPredicted RBP10.81□□□□□ -0.68
RBM39-227ENST00000470563 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
RBM39-227ENST00000470563 TYW1BQ6NUM6 668 aa10.79□□□□□ -0.68
RBM39-227ENST00000470563 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
RBM39-227ENST00000470563 FECHP22830 423 aa10.78□□□□□ -0.68
RBM39-227ENST00000470563 CERKQ8TCT0 537 aa10.78□□□□□ -0.68
RBM39-227ENST00000470563 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
RBM39-227ENST00000470563 PCDHGA10Q9Y5H3 936 aa10.78□□□□□ -0.68
RBM39-227ENST00000470563 PLEKHG3A1L390 1219 aa10.77□□□□□ -0.69
RBM39-227ENST00000470563 IL27Q8NEV9 243 aa10.77□□□□□ -0.69
RBM39-227ENST00000470563 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms