RNA–Protein interactions for RNA: ENST00000470498.1

RNF220-207, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-207ENST00000470498 POTEBQ6S5H4 581 aa9.4□□□□□ -0.9
RNF220-207ENST00000470498 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
RNF220-207ENST00000470498 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.39□□□□□ -0.91
RNF220-207ENST00000470498 EMP3P54852 163 aa9.37□□□□□ -0.91
RNF220-207ENST00000470498 PLCB2Q00722 1185 aa9.37□□□□□ -0.91
RNF220-207ENST00000470498 NKX1-1Q15270 411 aaPredicted RBP9.37□□□□□ -0.91
RNF220-207ENST00000470498 CABP2Q9NPB3 220 aa9.37□□□□□ -0.91
RNF220-207ENST00000470498 HS3ST6Q96QI5 342 aa9.35□□□□□ -0.91
RNF220-207ENST00000470498 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
RNF220-207ENST00000470498 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
RNF220-207ENST00000470498 SPRYD3Q8NCJ5 442 aa9.33□□□□□ -0.92
RNF220-207ENST00000470498 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
RNF220-207ENST00000470498 EFCAB3Q8N7B9 438 aa9.32□□□□□ -0.92
RNF220-207ENST00000470498 NCAPD3P42695 1498 aa9.32□□□□□ -0.92
RNF220-207ENST00000470498 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
RNF220-207ENST00000470498 RYDENQ9NUL5 291 aaKnown RBP9.29□□□□□ -0.92
RNF220-207ENST00000470498 SOX12O15370 315 aa9.28□□□□□ -0.92
RNF220-207ENST00000470498 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
RNF220-207ENST00000470498 MKRN3Q13064 507 aaKnown RBP9.28□□□□□ -0.92
RNF220-207ENST00000470498 PDCD7Q8N8D1 485 aaKnown RBP9.28□□□□□ -0.92
RNF220-207ENST00000470498 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
RNF220-207ENST00000470498 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
RNF220-207ENST00000470498 NLRP6P59044 892 aa9.25□□□□□ -0.93
RNF220-207ENST00000470498 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
RNF220-207ENST00000470498 C3orf67Q6ZVT6 689 aa9.24□□□□□ -0.93
RNF220-207ENST00000470498 ATAD2BQ9ULI0 1458 aa9.23□□□□□ -0.93
RNF220-207ENST00000470498 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
RNF220-207ENST00000470498 FBXO22Q8NEZ5 403 aa9.23□□□□□ -0.93
RNF220-207ENST00000470498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.94
RNF220-207ENST00000470498 MS4A4AQ96JQ5 239 aa9.19□□□□□ -0.94
RNF220-207ENST00000470498 CUX2O14529 1486 aa9.18□□□□□ -0.94
RNF220-207ENST00000470498 SMARCA2P51531 1590 aa9.18□□□□□ -0.94
RNF220-207ENST00000470498 ILDR1Q86SU0 546 aaPredicted RBP9.18□□□□□ -0.94
RNF220-207ENST00000470498 L3MBTL3Q96JM7 780 aaPredicted RBP9.17□□□□□ -0.94
RNF220-207ENST00000470498 SMARCA4P51532 1647 aa9.16□□□□□ -0.94
RNF220-207ENST00000470498 PPP1R37O75864 691 aa9.15□□□□□ -0.94
RNF220-207ENST00000470498 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.94
RNF220-207ENST00000470498 TSHZ2Q9NRE2 1034 aa9.15□□□□□ -0.94
RNF220-207ENST00000470498 HMGXB3Q12766 1538 aa9.15□□□□□ -0.95
RNF220-207ENST00000470498 ERCC6Q03468 1493 aa9.15□□□□□ -0.95
RNF220-207ENST00000470498 HOXB3P14651 431 aaPredicted RBP9.14□□□□□ -0.95
RNF220-207ENST00000470498 BAZ1AQ9NRL2 1556 aaPredicted RBP9.13□□□□□ -0.95
RNF220-207ENST00000470498 NESP48681 1621 aa9.11□□□□□ -0.95
RNF220-207ENST00000470498 BAZ1BQ9UIG0 1483 aaKnown RBP9.1□□□□□ -0.95
RNF220-207ENST00000470498 DPY19L2Q6NUT2 758 aa9.1□□□□□ -0.95
RNF220-207ENST00000470498 PEG3Q9GZU2 1588 aa9.1□□□□□ -0.95
RNF220-207ENST00000470498 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
RNF220-207ENST00000470498 VSIG10Q8N0Z9 540 aa9.08□□□□□ -0.96
RNF220-207ENST00000470498 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
RNF220-207ENST00000470498 MYT1LQ9UL68 1186 aa9.06□□□□□ -0.96
RNF220-207ENST00000470498 ERBB3P21860 1342 aa9.05□□□□□ -0.96
RNF220-207ENST00000470498 CADPS2Q86UW7 1296 aa9.05□□□□□ -0.96
RNF220-207ENST00000470498 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
RNF220-207ENST00000470498 G3V3G9 751 aa9.04□□□□□ -0.96
RNF220-207ENST00000470498 MICALL2Q8IY33 904 aa9.04□□□□□ -0.96
RNF220-207ENST00000470498 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
RNF220-207ENST00000470498 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
RNF220-207ENST00000470498 CADPSQ9ULU8 1353 aa9.03□□□□□ -0.96
RNF220-207ENST00000470498 KDM2AQ9Y2K7 1162 aa9.03□□□□□ -0.96
RNF220-207ENST00000470498 VARS2Q5ST30 1063 aaKnown RBP9.01□□□□□ -0.97
RNF220-207ENST00000470498 ZNF710Q8N1W2 664 aa9.01□□□□□ -0.97
RNF220-207ENST00000470498 DOK7Q18PE1 504 aa8.97□□□□□ -0.97
RNF220-207ENST00000470498 NCKAP5LQ9HCH0 1330 aa8.97□□□□□ -0.97
RNF220-207ENST00000470498 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
RNF220-207ENST00000470498 PDE4AP27815 886 aa8.95□□□□□ -0.98
RNF220-207ENST00000470498 CRISPLD2Q9H0B8 497 aa8.95□□□□□ -0.98
RNF220-207ENST00000470498 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
RNF220-207ENST00000470498 LARP6Q9BRS8 491 aaKnown RBP8.93□□□□□ -0.98
RNF220-207ENST00000470498 WDR70Q9NW82 654 aa8.93□□□□□ -0.98
RNF220-207ENST00000470498 WIZO95785 1651 aa8.93□□□□□ -0.98
RNF220-207ENST00000470498 KIF21AQ7Z4S6 1674 aa8.92□□□□□ -0.98
RNF220-207ENST00000470498 RSF1Q96T23 1441 aaPredicted RBP8.91□□□□□ -0.98
RNF220-207ENST00000470498 MFSD10Q14728 455 aa8.91□□□□□ -0.98
RNF220-207ENST00000470498 TMC2Q8TDI7 906 aa8.91□□□□□ -0.98
RNF220-207ENST00000470498 GPHNQ9NQX3 736 aaPredicted RBP8.91□□□□□ -0.98
RNF220-207ENST00000470498 MRC2Q9UBG0 1479 aa8.9□□□□□ -0.98
RNF220-207ENST00000470498 PTGER2P43116 358 aa8.9□□□□□ -0.98
RNF220-207ENST00000470498 DDX27Q96GQ7 796 aaKnown RBP8.9□□□□□ -0.98
RNF220-207ENST00000470498 TMEM92Q6UXU6 159 aa8.89□□□□□ -0.99
RNF220-207ENST00000470498 CFTRP13569 1480 aa8.89□□□□□ -0.99
RNF220-207ENST00000470498 C2orf72A6NCS6 295 aa8.88□□□□□ -0.99
RNF220-207ENST00000470498 KIF3CO14782 793 aa8.88□□□□□ -0.99
RNF220-207ENST00000470498 RIMBP2O15034 1052 aa8.88□□□□□ -0.99
RNF220-207ENST00000470498 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
RNF220-207ENST00000470498 WDR62O43379 1518 aa8.86□□□□□ -0.99
RNF220-207ENST00000470498 FANCD2Q9BXW9 1451 aa8.86□□□□□ -0.99
RNF220-207ENST00000470498 DSG2Q14126 1118 aa8.86□□□□□ -0.99
RNF220-207ENST00000470498 GPR153Q6NV75 609 aa8.86□□□□□ -0.99
RNF220-207ENST00000470498 CEP164Q9UPV0 1460 aa8.85□□□□□ -0.99
RNF220-207ENST00000470498 FOXK1P85037 733 aa8.85□□□□□ -0.99
RNF220-207ENST00000470498 P3H3Q8IVL6 736 aa8.85□□□□□ -0.99
RNF220-207ENST00000470498 E2F4Q16254 413 aa8.84□□□□□ -0.99
RNF220-207ENST00000470498 ANKRD13DQ6ZTN6 518 aa8.84□□□□□ -0.99
RNF220-207ENST00000470498 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -0.99
RNF220-207ENST00000470498 PLPP6Q8IY26 295 aa8.82□□□□□ -1
RNF220-207ENST00000470498 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
RNF220-207ENST00000470498 CAMK2BQ13554 666 aa8.81□□□□□ -1
RNF220-207ENST00000470498 TOP2AP11388 1531 aaKnown RBP8.8□□□□□ -1
RNF220-207ENST00000470498 PLA2G2EQ9NZK7 142 aa8.79□□□□□ -1
RNF220-207ENST00000470498 URB2Q14146 1524 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms