RNA–Protein interactions for RNA: ENST00000470215.1

PHTF2-211, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 5

Gene PHTF2, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-211ENST00000470215 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
PHTF2-211ENST00000470215 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
PHTF2-211ENST00000470215 NLRP6P59044 892 aa13.66□□□□□ -0.22
PHTF2-211ENST00000470215 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
PHTF2-211ENST00000470215 ZNF687Q8N1G0 1237 aa13.64□□□□□ -0.23
PHTF2-211ENST00000470215 RNF166Q96A37 237 aaPredicted RBP13.6□□□□□ -0.23
PHTF2-211ENST00000470215 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
PHTF2-211ENST00000470215 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
PHTF2-211ENST00000470215 PTGER2P43116 358 aa13.57□□□□□ -0.24
PHTF2-211ENST00000470215 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
PHTF2-211ENST00000470215 ARSIQ5FYB1 569 aa13.54□□□□□ -0.24
PHTF2-211ENST00000470215 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
PHTF2-211ENST00000470215 MFRPQ9BY79 579 aa13.51□□□□□ -0.25
PHTF2-211ENST00000470215 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
PHTF2-211ENST00000470215 STK25O00506 426 aa13.48□□□□□ -0.25
PHTF2-211ENST00000470215 KIF3CO14782 793 aa13.47□□□□□ -0.25
PHTF2-211ENST00000470215 C2orf72A6NCS6 295 aa13.43□□□□□ -0.26
PHTF2-211ENST00000470215 ECM2O94769 699 aaPredicted RBP13.43□□□□□ -0.26
PHTF2-211ENST00000470215 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.264e-7■■■□□ 16.5
PHTF2-211ENST00000470215 SLC34A2O95436 690 aa13.41□□□□□ -0.26
PHTF2-211ENST00000470215 PBX2P40425 430 aa13.41□□□□□ -0.26
PHTF2-211ENST00000470215 ANKRD13DQ6ZTN6 518 aa13.41□□□□□ -0.26
PHTF2-211ENST00000470215 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.26
PHTF2-211ENST00000470215 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
PHTF2-211ENST00000470215 NUDT7P0C024 238 aa13.35□□□□□ -0.27
PHTF2-211ENST00000470215 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
PHTF2-211ENST00000470215 RGL2O15211 777 aa13.3□□□□□ -0.28
PHTF2-211ENST00000470215 PKD2Q13563 968 aa13.3□□□□□ -0.28
PHTF2-211ENST00000470215 LHX6Q9UPM6 363 aa13.3□□□□□ -0.28
PHTF2-211ENST00000470215 PSDA5PKW4 1024 aaPredicted RBP13.28□□□□□ -0.28
PHTF2-211ENST00000470215 POTEEQ6S8J3 1075 aa13.24□□□□□ -0.29
PHTF2-211ENST00000470215 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
PHTF2-211ENST00000470215 PPP1R37O75864 691 aa13.2□□□□□ -0.3
PHTF2-211ENST00000470215 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
PHTF2-211ENST00000470215 PTCD2Q8WV60 388 aaKnown RBP13.19□□□□□ -0.3
PHTF2-211ENST00000470215 KDM4FA0A1W2PPD8 638 aa13.17□□□□□ -0.3
PHTF2-211ENST00000470215 HCSTQ9UBK5 93 aa13.17□□□□□ -0.3
PHTF2-211ENST00000470215 FOXK1P85037 733 aa13.16□□□□□ -0.3
PHTF2-211ENST00000470215 ADGRD1Q6QNK2 874 aa13.16□□□□□ -0.3
PHTF2-211ENST00000470215 TK2O00142 265 aa13.14□□□□□ -0.31
PHTF2-211ENST00000470215 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
PHTF2-211ENST00000470215 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
PHTF2-211ENST00000470215 TBC1D12O60347 775 aa13.1□□□□□ -0.31
PHTF2-211ENST00000470215 PLPP6Q8IY26 295 aa13.1□□□□□ -0.31
PHTF2-211ENST00000470215 PLA2G2EQ9NZK7 142 aa13.09□□□□□ -0.31
PHTF2-211ENST00000470215 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
PHTF2-211ENST00000470215 HRO43593 1189 aa13.05□□□□□ -0.32
PHTF2-211ENST00000470215 DSG2Q14126 1118 aa13.04□□□□□ -0.32
PHTF2-211ENST00000470215 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
PHTF2-211ENST00000470215 PSEN2P49810 448 aa13.02□□□□□ -0.33
PHTF2-211ENST00000470215 KCNH8Q96L42 1107 aa13.02□□□□□ -0.33
PHTF2-211ENST00000470215 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
PHTF2-211ENST00000470215 RYDENQ9NUL5 291 aaKnown RBP12.98□□□□□ -0.33
PHTF2-211ENST00000470215 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
PHTF2-211ENST00000470215 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
PHTF2-211ENST00000470215 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
PHTF2-211ENST00000470215 KCNK17Q96T54 332 aa12.94□□□□□ -0.34
PHTF2-211ENST00000470215 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
PHTF2-211ENST00000470215 SLC4A5Q9BY07 1137 aa12.9□□□□□ -0.34
PHTF2-211ENST00000470215 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.34
PHTF2-211ENST00000470215 VPS9D1Q9Y2B5 631 aa12.89□□□□□ -0.35
PHTF2-211ENST00000470215 BCL2L12Q9HB09 334 aa12.88□□□□□ -0.35
PHTF2-211ENST00000470215 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
PHTF2-211ENST00000470215 PPP1R15BQ5SWA1 713 aa12.86□□□□□ -0.35
PHTF2-211ENST00000470215 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
PHTF2-211ENST00000470215 UPF1Q92900 1129 aaKnown RBP eCLIP12.86□□□□□ -0.35
PHTF2-211ENST00000470215 FOSBP53539 338 aa12.83□□□□□ -0.36
PHTF2-211ENST00000470215 PTPREP23469 700 aa12.81□□□□□ -0.36
PHTF2-211ENST00000470215 PDE4AP27815 886 aa12.81□□□□□ -0.36
PHTF2-211ENST00000470215 ANO8Q9HCE9 1232 aaPredicted RBP12.8□□□□□ -0.36
PHTF2-211ENST00000470215 IFFO2Q5TF58 517 aa12.79□□□□□ -0.36
PHTF2-211ENST00000470215 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
PHTF2-211ENST00000470215 BHMG1C9JSJ3 638 aaPredicted RBP12.78□□□□□ -0.36
PHTF2-211ENST00000470215 RGS20O76081 388 aa12.77□□□□□ -0.37
PHTF2-211ENST00000470215 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
PHTF2-211ENST00000470215 PTPN5P54829 565 aa12.76□□□□□ -0.37
PHTF2-211ENST00000470215 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
PHTF2-211ENST00000470215 THSD4Q6ZMP0 1018 aa12.75□□□□□ -0.37
PHTF2-211ENST00000470215 GOLGA8CPA6NN73 597 aa12.74□□□□□ -0.37
PHTF2-211ENST00000470215 EVI5O60447 810 aa12.74□□□□□ -0.37
PHTF2-211ENST00000470215 MRPL50Q8N5N7 158 aaKnown RBP12.73□□□□□ -0.37
PHTF2-211ENST00000470215 ZDHHC16Q969W1 377 aa12.73□□□□□ -0.37
PHTF2-211ENST00000470215 NBPF3Q9H094 633 aa12.72□□□□□ -0.37
PHTF2-211ENST00000470215 WNT2BQ93097 391 aa12.71□□□□□ -0.37
PHTF2-211ENST00000470215 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
PHTF2-211ENST00000470215 ADAM33Q9BZ11 813 aa12.69□□□□□ -0.38
PHTF2-211ENST00000470215 MFSD10Q14728 455 aa12.67□□□□□ -0.38
PHTF2-211ENST00000470215 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
PHTF2-211ENST00000470215 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
PHTF2-211ENST00000470215 MAP3K9P80192 1104 aa12.66□□□□□ -0.38
PHTF2-211ENST00000470215 A0A0G2JS52 829 aa12.63□□□□□ -0.39
PHTF2-211ENST00000470215 PPP1R3GB7ZBB8 358 aa12.63□□□□□ -0.39
PHTF2-211ENST00000470215 RABGEF1Q9UJ41 708 aa12.61□□□□□ -0.39
PHTF2-211ENST00000470215 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
PHTF2-211ENST00000470215 PCDHGA10Q9Y5H3 936 aa12.58□□□□□ -0.4
PHTF2-211ENST00000470215 ANKK1Q8NFD2 765 aa12.57□□□□□ -0.4
PHTF2-211ENST00000470215 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
PHTF2-211ENST00000470215 PHF14O94880 888 aa12.56□□□□□ -0.4
PHTF2-211ENST00000470215 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
PHTF2-211ENST00000470215 IRX2Q9BZI1 471 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms