RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 CAMK2BQ13554 666 aa8.48□□□□□ -1.05
GCFC2-205ENST00000470197 EMILIN3Q9NT22 766 aa8.46□□□□□ -1.06
GCFC2-205ENST00000470197 FECHP22830 423 aa8.46□□□□□ -1.06
GCFC2-205ENST00000470197 DDX27Q96GQ7 796 aaKnown RBP8.46□□□□□ -1.06
GCFC2-205ENST00000470197 ARIH1Q9Y4X5 557 aaPredicted RBP8.46□□□□□ -1.06
GCFC2-205ENST00000470197 PITPNM1O00562 1244 aa8.45□□□□□ -1.06
GCFC2-205ENST00000470197 PARP9Q8IXQ6 854 aa8.43□□□□□ -1.06
GCFC2-205ENST00000470197 DPYSL4O14531 572 aa8.43□□□□□ -1.06
GCFC2-205ENST00000470197 MAP3K13O43283 966 aa8.42□□□□□ -1.06
GCFC2-205ENST00000470197 NLRP6P59044 892 aa8.41□□□□□ -1.06
GCFC2-205ENST00000470197 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
GCFC2-205ENST00000470197 REPIN1Q9BWE0 567 aaKnown RBP8.4□□□□□ -1.07
GCFC2-205ENST00000470197 ZNF579Q8NAF0 562 aaKnown RBP8.39□□□□□ -1.07
GCFC2-205ENST00000470197 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
GCFC2-205ENST00000470197 AKT1S1Q96B36 256 aa8.39□□□□□ -1.07
GCFC2-205ENST00000470197 POM121Q96HA1 1249 aa8.39□□□□□ -1.07
GCFC2-205ENST00000470197 ZNF428Q96B54 188 aa8.39□□□□□ -1.07
GCFC2-205ENST00000470197 PDE4AP27815 886 aa8.38□□□□□ -1.07
GCFC2-205ENST00000470197 LOC105371045A0A1W2PR82 267 aa8.36□□□□□ -1.07
GCFC2-205ENST00000470197 PDIA4P13667 645 aaKnown RBP8.36□□□□□ -1.07
GCFC2-205ENST00000470197 MS4A1P11836 297 aa8.36□□□□□ -1.07
GCFC2-205ENST00000470197 TRPC6Q9Y210 931 aa8.36□□□□□ -1.07
GCFC2-205ENST00000470197 TRAK2O60296 914 aa8.35□□□□□ -1.07
GCFC2-205ENST00000470197 FARP1Q9Y4F1 1045 aaPredicted RBP8.35□□□□□ -1.07
GCFC2-205ENST00000470197 ZNF777Q9ULD5 760 aaPredicted RBP8.35□□□□□ -1.07
GCFC2-205ENST00000470197 SOX12O15370 315 aa8.34□□□□□ -1.07
GCFC2-205ENST00000470197 PRIM1P49642 420 aaKnown RBP8.34□□□□□ -1.07
GCFC2-205ENST00000470197 PPP1R15BQ5SWA1 713 aa8.32□□□□□ -1.08
GCFC2-205ENST00000470197 FBXO31Q5XUX0 539 aaPredicted RBP8.32□□□□□ -1.08
GCFC2-205ENST00000470197 KIF12Q96FN5 646 aa8.32□□□□□ -1.08
GCFC2-205ENST00000470197 DSG2Q14126 1118 aa8.31□□□□□ -1.08
GCFC2-205ENST00000470197 MCM6Q14566 821 aa8.31□□□□□ -1.08
GCFC2-205ENST00000470197 IRF6O14896 467 aa8.31□□□□□ -1.08
GCFC2-205ENST00000470197 PDIA6Q15084 440 aa8.31□□□□□ -1.08
GCFC2-205ENST00000470197 AMHR2Q16671 573 aa8.3□□□□□ -1.08
GCFC2-205ENST00000470197 FNBP4Q8N3X1 1017 aaPredicted RBP8.29□□□□□ -1.08
GCFC2-205ENST00000470197 CCDC9Q9Y3X0 531 aaKnown RBP8.29□□□□□ -1.08
GCFC2-205ENST00000470197 ZBTB7CA1YPR0 619 aa8.28□□□□□ -1.08
GCFC2-205ENST00000470197 KCTD17Q8N5Z5 321 aa8.28□□□□□ -1.08
GCFC2-205ENST00000470197 GRXCR2A6NFK2 248 aa8.27□□□□□ -1.09
GCFC2-205ENST00000470197 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
GCFC2-205ENST00000470197 OXER1Q8TDS5 423 aa8.27□□□□□ -1.09
GCFC2-205ENST00000470197 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.09
GCFC2-205ENST00000470197 IRF5Q13568 498 aa8.26□□□□□ -1.09
GCFC2-205ENST00000470197 DPY19L2Q6NUT2 758 aa8.26□□□□□ -1.09
GCFC2-205ENST00000470197 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
GCFC2-205ENST00000470197 A6NJR5 290 aa8.26□□□□□ -1.09
GCFC2-205ENST00000470197 PHOX2BQ99453 314 aa8.26□□□□□ -1.09
GCFC2-205ENST00000470197 FLIIQ13045 1269 aa8.25□□□□□ -1.09
GCFC2-205ENST00000470197 IGSF3O75054 1194 aa8.25□□□□□ -1.09
GCFC2-205ENST00000470197 OSBPP22059 807 aa8.25□□□□□ -1.09
GCFC2-205ENST00000470197 AEBP1Q8IUX7 1158 aa8.25□□□□□ -1.09
GCFC2-205ENST00000470197 MINK1Q8N4C8 1332 aaPredicted RBP8.24□□□□□ -1.09
GCFC2-205ENST00000470197 NUTM2FA1L443 756 aa8.24□□□□□ -1.09
GCFC2-205ENST00000470197 GIGYF2Q6Y7W6 1299 aaKnown RBP8.24□□□□□ -1.09
GCFC2-205ENST00000470197 RGS22Q8NE09 1264 aa8.24□□□□□ -1.09
GCFC2-205ENST00000470197 FOXD4L5Q5VV16 416 aaPredicted RBP8.24□□□□□ -1.09
GCFC2-205ENST00000470197 FOXD4L4Q8WXT5 416 aaPredicted RBP8.24□□□□□ -1.09
GCFC2-205ENST00000470197 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
GCFC2-205ENST00000470197 PROCA1Q8NCQ7 364 aaPredicted RBP8.23□□□□□ -1.09
GCFC2-205ENST00000470197 RETREG2Q8NC44 543 aa8.23□□□□□ -1.09
GCFC2-205ENST00000470197 TTLL12Q14166 644 aaPredicted RBP8.23□□□□□ -1.09
GCFC2-205ENST00000470197 NLRP7Q8WX94 980 aa8.22□□□□□ -1.09
GCFC2-205ENST00000470197 RAD21O60216 631 aa8.21□□□□□ -1.09
GCFC2-205ENST00000470197 PHF12Q96QT6 1004 aa8.2□□□□□ -1.1
GCFC2-205ENST00000470197 POTEDQ86YR6 584 aa8.2□□□□□ -1.1
GCFC2-205ENST00000470197 GNPATO15228 680 aa8.2□□□□□ -1.1
GCFC2-205ENST00000470197 PROSER2Q86WR7 435 aaPredicted RBP8.2□□□□□ -1.1
GCFC2-205ENST00000470197 DDX12PQ92771 950 aa8.19□□□□□ -1.1
GCFC2-205ENST00000470197 GOPCQ9HD26 462 aa8.19□□□□□ -1.1
GCFC2-205ENST00000470197 CARNS1A5YM72 827 aa8.18□□□□□ -1.1
GCFC2-205ENST00000470197 ABCC9O60706 1549 aa8.18□□□□□ -1.1
GCFC2-205ENST00000470197 PRKAR2AP13861 404 aaKnown RBP8.18□□□□□ -1.1
GCFC2-205ENST00000470197 RBM42Q9BTD8 480 aaKnown RBP8.18□□□□□ -1.1
GCFC2-205ENST00000470197 TRAIPQ9BWF2 469 aa8.17□□□□□ -1.1
GCFC2-205ENST00000470197 CACNB1Q02641 598 aaPredicted RBP8.17□□□□□ -1.1
GCFC2-205ENST00000470197 FAM161AQ3B820 660 aa8.16□□□□□ -1.1
GCFC2-205ENST00000470197 ILDR1Q86SU0 546 aaPredicted RBP8.16□□□□□ -1.1
GCFC2-205ENST00000470197 TMEM106CQ9BVX2 250 aa8.16□□□□□ -1.1
GCFC2-205ENST00000470197 PLSCR2Q9NRY7 297 aa8.16□□□□□ -1.1
GCFC2-205ENST00000470197 SNRKQ9NRH2 765 aa8.16□□□□□ -1.1
GCFC2-205ENST00000470197 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
GCFC2-205ENST00000470197 PTGDRQ13258 359 aa8.14□□□□□ -1.11
GCFC2-205ENST00000470197 TMUB1Q9BVT8 246 aa8.14□□□□□ -1.11
GCFC2-205ENST00000470197 CDHR5Q9HBB8 845 aa8.14□□□□□ -1.11
GCFC2-205ENST00000470197 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
GCFC2-205ENST00000470197 UPF1Q92900 1129 aaKnown RBP eCLIP8.14□□□□□ -1.11
GCFC2-205ENST00000470197 GZF1Q9H116 711 aaPredicted RBP8.13□□□□□ -1.11
GCFC2-205ENST00000470197 FOXK1P85037 733 aa8.13□□□□□ -1.11
GCFC2-205ENST00000470197 SPDYE16A6NNV3 312 aaPredicted RBP8.12□□□□□ -1.11
GCFC2-205ENST00000470197 HIC1Q14526 733 aa8.11□□□□□ -1.11
GCFC2-205ENST00000470197 PLPP6Q8IY26 295 aa8.11□□□□□ -1.11
GCFC2-205ENST00000470197 NPDC1Q9NQX5 325 aaPredicted RBP8.11□□□□□ -1.11
GCFC2-205ENST00000470197 C2orf72A6NCS6 295 aa8.11□□□□□ -1.11
GCFC2-205ENST00000470197 PCMTD1Q96MG8 357 aaPredicted RBP8.1□□□□□ -1.11
GCFC2-205ENST00000470197 SH3D19Q5HYK7 790 aa8.1□□□□□ -1.11
GCFC2-205ENST00000470197 MICALL2Q8IY33 904 aa8.1□□□□□ -1.11
GCFC2-205ENST00000470197 MFAP1P55081 439 aaKnown RBP8.09□□□□□ -1.11
GCFC2-205ENST00000470197 MDM2Q00987 491 aaPredicted RBP8.09□□□□□ -1.11
GCFC2-205ENST00000470197 POM121CA8CG34 1229 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms