RNA–Protein interactions for RNA: ENST00000470085.5

GCSAM-203, Transcript of germinal center associated signaling and motility, humanhuman

TSL 2

Gene GCSAM, Length 1,072 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSAM-203ENST00000470085 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
GCSAM-203ENST00000470085 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
GCSAM-203ENST00000470085 RGL2O15211 777 aa9.82□□□□□ -0.84
GCSAM-203ENST00000470085 CDAN1Q8IWY9 1227 aa9.8□□□□□ -0.84
GCSAM-203ENST00000470085 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
GCSAM-203ENST00000470085 MFRPQ9BY79 579 aa9.77□□□□□ -0.85
GCSAM-203ENST00000470085 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
GCSAM-203ENST00000470085 MARVELD3Q96A59 401 aa9.76□□□□□ -0.85
GCSAM-203ENST00000470085 HOXB3P14651 431 aaPredicted RBP9.75□□□□□ -0.85
GCSAM-203ENST00000470085 EMP3P54852 163 aa9.75□□□□□ -0.85
GCSAM-203ENST00000470085 BAZ1AQ9NRL2 1556 aaPredicted RBP9.75□□□□□ -0.85
GCSAM-203ENST00000470085 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
GCSAM-203ENST00000470085 RIMBP2O15034 1052 aa9.73□□□□□ -0.85
GCSAM-203ENST00000470085 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
GCSAM-203ENST00000470085 TMEM92Q6UXU6 159 aa9.72□□□□□ -0.85
GCSAM-203ENST00000470085 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.85
GCSAM-203ENST00000470085 HOXB1P14653 301 aaPredicted RBP9.69□□□□□ -0.86
GCSAM-203ENST00000470085 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
GCSAM-203ENST00000470085 UNC13AQ9UPW8 1703 aa9.69□□□□□ -0.86
GCSAM-203ENST00000470085 HS6ST3Q8IZP7 471 aa9.68□□□□□ -0.86
GCSAM-203ENST00000470085 HS3ST6Q96QI5 342 aa9.66□□□□□ -0.86
GCSAM-203ENST00000470085 WIZO95785 1651 aa9.65□□□□□ -0.86
GCSAM-203ENST00000470085 FAM205CA6NFA0 338 aa9.65□□□□□ -0.86
GCSAM-203ENST00000470085 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
GCSAM-203ENST00000470085 KIF3CO14782 793 aa9.61□□□□□ -0.87
GCSAM-203ENST00000470085 POTEB3A0JP26 581 aa9.6□□□□□ -0.87
GCSAM-203ENST00000470085 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
GCSAM-203ENST00000470085 POTEBQ6S5H4 581 aa9.6□□□□□ -0.87
GCSAM-203ENST00000470085 ERBB3P21860 1342 aa9.59□□□□□ -0.87
GCSAM-203ENST00000470085 C2orf72A6NCS6 295 aa9.59□□□□□ -0.87
GCSAM-203ENST00000470085 GPR153Q6NV75 609 aa9.59□□□□□ -0.87
GCSAM-203ENST00000470085 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
GCSAM-203ENST00000470085 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
GCSAM-203ENST00000470085 TMC2Q8TDI7 906 aa9.58□□□□□ -0.88
GCSAM-203ENST00000470085 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
GCSAM-203ENST00000470085 TOP2AP11388 1531 aaKnown RBP9.57□□□□□ -0.88
GCSAM-203ENST00000470085 SPNS2Q8IVW8 549 aa9.57□□□□□ -0.88
GCSAM-203ENST00000470085 RYDENQ9NUL5 291 aaKnown RBP9.57□□□□□ -0.88
GCSAM-203ENST00000470085 PPP1R37O75864 691 aa9.56□□□□□ -0.88
GCSAM-203ENST00000470085 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
GCSAM-203ENST00000470085 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
GCSAM-203ENST00000470085 SLC34A2O95436 690 aa9.53□□□□□ -0.88
GCSAM-203ENST00000470085 ARSIQ5FYB1 569 aa9.53□□□□□ -0.88
GCSAM-203ENST00000470085 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
GCSAM-203ENST00000470085 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
GCSAM-203ENST00000470085 CCDC88BA6NC98 1476 aa9.52□□□□□ -0.89
GCSAM-203ENST00000470085 NKX1-1Q15270 411 aaPredicted RBP9.49□□□□□ -0.89
GCSAM-203ENST00000470085 ZNF687Q8N1G0 1237 aa9.49□□□□□ -0.89
GCSAM-203ENST00000470085 PEG3Q9GZU2 1588 aa9.49□□□□□ -0.89
GCSAM-203ENST00000470085 ZNF316A6NFI3 1004 aaPredicted RBP9.48□□□□□ -0.89
GCSAM-203ENST00000470085 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
GCSAM-203ENST00000470085 SMARCA2P51531 1590 aa9.48□□□□□ -0.89
GCSAM-203ENST00000470085 GPHNQ9NQX3 736 aaPredicted RBP9.47□□□□□ -0.89
GCSAM-203ENST00000470085 FOXK1P85037 733 aa9.46□□□□□ -0.9
GCSAM-203ENST00000470085 PCDHGA4Q9Y5G9 962 aa9.46□□□□□ -0.9
GCSAM-203ENST00000470085 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
GCSAM-203ENST00000470085 ATAD2BQ9ULI0 1458 aa9.44□□□□□ -0.9
GCSAM-203ENST00000470085 NUDT7P0C024 238 aa9.43□□□□□ -0.9
GCSAM-203ENST00000470085 BAZ1BQ9UIG0 1483 aaKnown RBP9.42□□□□□ -0.9
GCSAM-203ENST00000470085 TRIM26Q12899 539 aaPredicted RBP9.42□□□□□ -0.9
GCSAM-203ENST00000470085 PLPP6Q8IY26 295 aa9.42□□□□□ -0.9
GCSAM-203ENST00000470085 PTCD2Q8WV60 388 aaKnown RBP9.41□□□□□ -0.9
GCSAM-203ENST00000470085 PCGF6Q9BYE7 350 aa9.41□□□□□ -0.9
GCSAM-203ENST00000470085 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
GCSAM-203ENST00000470085 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.9
GCSAM-203ENST00000470085 PBX2P40425 430 aa9.4□□□□□ -0.9
GCSAM-203ENST00000470085 DSG2Q14126 1118 aa9.39□□□□□ -0.91
GCSAM-203ENST00000470085 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
GCSAM-203ENST00000470085 EEA1Q15075 1411 aa9.39□□□□□ -0.91
GCSAM-203ENST00000470085 TBC1D12O60347 775 aa9.38□□□□□ -0.91
GCSAM-203ENST00000470085 PTGER2P43116 358 aa9.38□□□□□ -0.91
GCSAM-203ENST00000470085 GTPBP6O43824 516 aaPredicted RBP9.37□□□□□ -0.91
GCSAM-203ENST00000470085 CRISPLD2Q9H0B8 497 aa9.37□□□□□ -0.91
GCSAM-203ENST00000470085 NCAPD3P42695 1498 aa9.36□□□□□ -0.91
GCSAM-203ENST00000470085 KDM4FA0A1W2PPD8 638 aa9.35□□□□□ -0.91
GCSAM-203ENST00000470085 EIF4G1Q04637 1599 aaKnown RBP9.35□□□□□ -0.91
GCSAM-203ENST00000470085 PDE4AP27815 886 aa9.34□□□□□ -0.91
GCSAM-203ENST00000470085 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
GCSAM-203ENST00000470085 HRCP23327 699 aa9.32□□□□□ -0.92
GCSAM-203ENST00000470085 PPP1R15BQ5SWA1 713 aa9.32□□□□□ -0.92
GCSAM-203ENST00000470085 MYT1LQ9UL68 1186 aa9.32□□□□□ -0.92
GCSAM-203ENST00000470085 WRNQ14191 1432 aaPredicted RBP eCLIP9.31□□□□□ -0.92
GCSAM-203ENST00000470085 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
GCSAM-203ENST00000470085 OXER1Q8TDS5 423 aa9.31□□□□□ -0.92
GCSAM-203ENST00000470085 RNF166Q96A37 237 aaPredicted RBP9.31□□□□□ -0.92
GCSAM-203ENST00000470085 ABCC8Q09428 1581 aa9.31□□□□□ -0.92
GCSAM-203ENST00000470085 HMGXB3Q12766 1538 aa9.31□□□□□ -0.92
GCSAM-203ENST00000470085 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
GCSAM-203ENST00000470085 UBTFP17480 764 aaKnown RBP9.29□□□□□ -0.92
GCSAM-203ENST00000470085 ARHGAP33O14559 1287 aa9.27□□□□□ -0.93
GCSAM-203ENST00000470085 ZEB1P37275 1124 aaPredicted RBP9.27□□□□□ -0.93
GCSAM-203ENST00000470085 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
GCSAM-203ENST00000470085 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.93
GCSAM-203ENST00000470085 TNIKQ9UKE5 1360 aa9.26□□□□□ -0.93
GCSAM-203ENST00000470085 POTEEQ6S8J3 1075 aa9.26□□□□□ -0.93
GCSAM-203ENST00000470085 DDX27Q96GQ7 796 aaKnown RBP9.26□□□□□ -0.93
GCSAM-203ENST00000470085 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
GCSAM-203ENST00000470085 MFSD10Q14728 455 aa9.25□□□□□ -0.93
GCSAM-203ENST00000470085 LARP6Q9BRS8 491 aaKnown RBP9.25□□□□□ -0.93
GCSAM-203ENST00000470085 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms