RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 YEATS2Q9ULM3 1422 aa27.54■■■□□ 2
C4A-250ENST00000469975 CDK11AQ9UQ88 783 aaPredicted RBP27.54■■■□□ 2
C4A-250ENST00000469975 ZFYVE16Q7Z3T8 1539 aa27.53■■■□□ 2
C4A-250ENST00000469975 POGZQ7Z3K3 1410 aa27.5■■□□□ 1.99
C4A-250ENST00000469975 CASKIN1Q8WXD9 1431 aa27.5■■□□□ 1.99
C4A-250ENST00000469975 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
C4A-250ENST00000469975 CLIP1P30622 1438 aa27.48■■□□□ 1.99
C4A-250ENST00000469975 CDC42BPBQ9Y5S2 1711 aa27.47■■□□□ 1.99
C4A-250ENST00000469975 ARHGAP5Q13017 1502 aa27.46■■□□□ 1.99
C4A-250ENST00000469975 EFCAB2Q5VUJ9 269 aa27.46■■□□□ 1.99
C4A-250ENST00000469975 CCDC18Q5T9S5 1454 aa27.43■■□□□ 1.98
C4A-250ENST00000469975 MAGI2Q86UL8 1455 aa27.43■■□□□ 1.98
C4A-250ENST00000469975 FYCO1Q9BQS8 1478 aa27.39■■□□□ 1.98
C4A-250ENST00000469975 PREX2Q70Z35 1606 aa27.39■■□□□ 1.98
C4A-250ENST00000469975 MLECQ14165 292 aa27.37■■□□□ 1.97
C4A-250ENST00000469975 CDC42BPAQ5VT25 1732 aa27.36■■□□□ 1.97
C4A-250ENST00000469975 PLPPR3Q6T4P5 718 aa27.36■■□□□ 1.97
C4A-250ENST00000469975 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
C4A-250ENST00000469975 FER1L4A9Z1Z3 1794 aa27.35■■□□□ 1.97
C4A-250ENST00000469975 ATP10AO60312 1499 aa27.33■■□□□ 1.97
C4A-250ENST00000469975 ZNF518AQ6AHZ1 1483 aa27.33■■□□□ 1.97
C4A-250ENST00000469975 KDM5CP41229 1560 aa27.33■■□□□ 1.97
C4A-250ENST00000469975 C9orf84Q5VXU9 1444 aa27.31■■□□□ 1.96
C4A-250ENST00000469975 ARHGEF12Q9NZN5 1544 aa27.31■■□□□ 1.96
C4A-250ENST00000469975 ITSN2Q9NZM3 1697 aa27.3■■□□□ 1.96
C4A-250ENST00000469975 ILDR1Q86SU0 546 aaPredicted RBP27.3■■□□□ 1.96
C4A-250ENST00000469975 ABCC1P33527 1531 aa27.3■■□□□ 1.96
C4A-250ENST00000469975 DIP2CQ9Y2E4 1556 aa27.27■■□□□ 1.96
C4A-250ENST00000469975 LMTK3Q96Q04 1460 aa27.27■■□□□ 1.96
C4A-250ENST00000469975 ABCA6Q8N139 1617 aa27.27■■□□□ 1.96
C4A-250ENST00000469975 TRAPPC8Q9Y2L5 1435 aa27.26■■□□□ 1.95
C4A-250ENST00000469975 MYT1LQ9UL68 1186 aa27.26■■□□□ 1.95
C4A-250ENST00000469975 SAMD9LQ8IVG5 1584 aa27.21■■□□□ 1.95
C4A-250ENST00000469975 ZNF777Q9ULD5 760 aaPredicted RBP27.2■■□□□ 1.94
C4A-250ENST00000469975 GPATCH8Q9UKJ3 1502 aaKnown RBP27.19■■□□□ 1.94
C4A-250ENST00000469975 MLH3Q9UHC1 1453 aa27.19■■□□□ 1.94
C4A-250ENST00000469975 KIDINS220Q9ULH0 1771 aa27.18■■□□□ 1.94
C4A-250ENST00000469975 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
C4A-250ENST00000469975 HSPA2P54652 639 aa27.16■■□□□ 1.94
C4A-250ENST00000469975 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
C4A-250ENST00000469975 REREQ9P2R6 1566 aa27.14■■□□□ 1.94
C4A-250ENST00000469975 CEBPAP49715 358 aaPredicted RBP27.13■■□□□ 1.93
C4A-250ENST00000469975 MTUS2Q5JR59 1369 aa27.11■■□□□ 1.93
C4A-250ENST00000469975 HNRNPMP52272 730 aaKnown RBP eCLIP27.1■■□□□ 1.93
C4A-250ENST00000469975 CCNB3Q8WWL7 1395 aa27.09■■□□□ 1.93
C4A-250ENST00000469975 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
C4A-250ENST00000469975 PREX1Q8TCU6 1659 aa27.06■■□□□ 1.92
C4A-250ENST00000469975 CFDP1Q9UEE9 299 aaPredicted RBP27.06■■□□□ 1.92
C4A-250ENST00000469975 AGLP35573 1532 aa27.06■■□□□ 1.92
C4A-250ENST00000469975 EHBP1L1Q8N3D4 1523 aa27.05■■□□□ 1.92
C4A-250ENST00000469975 C3P01024 1663 aa27.04■■□□□ 1.92
C4A-250ENST00000469975 LOC105371045A0A1W2PR82 267 aa27.03■■□□□ 1.92
C4A-250ENST00000469975 SUPT6HQ7KZ85 1726 aaKnown RBP27.02■■□□□ 1.92
C4A-250ENST00000469975 SPAG9O60271 1321 aaKnown RBP27.01■■□□□ 1.91
C4A-250ENST00000469975 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
C4A-250ENST00000469975 INO80Q9ULG1 1556 aaPredicted RBP27■■□□□ 1.91
C4A-250ENST00000469975 ATP7AQ04656 1500 aa27■■□□□ 1.91
C4A-250ENST00000469975 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
C4A-250ENST00000469975 PLEKHH2Q8IVE3 1493 aa26.98■■□□□ 1.91
C4A-250ENST00000469975 SETD1BQ9UPS6 1966 aaKnown RBP26.93■■□□□ 1.9
C4A-250ENST00000469975 ESF1Q9H501 851 aaKnown RBP26.92■■□□□ 1.9
C4A-250ENST00000469975 PLXNC1O60486 1568 aa26.91■■□□□ 1.9
C4A-250ENST00000469975 STRCQ7RTU9 1775 aa26.9■■□□□ 1.9
C4A-250ENST00000469975 NCOA2Q15596 1464 aa26.9■■□□□ 1.9
C4A-250ENST00000469975 A2MP01023 1474 aa26.89■■□□□ 1.9
C4A-250ENST00000469975 MBD5Q9P267 1494 aa26.89■■□□□ 1.9
C4A-250ENST00000469975 UHRF1BP1Q6BDS2 1440 aa26.89■■□□□ 1.89
C4A-250ENST00000469975 CLTCQ00610 1675 aaKnown RBP26.88■■□□□ 1.89
C4A-250ENST00000469975 ADGBQ8N7X0 1667 aa26.87■■□□□ 1.89
C4A-250ENST00000469975 FBXO41Q8TF61 875 aa26.87■■□□□ 1.89
C4A-250ENST00000469975 MROH2AA6NES4 1674 aa26.86■■□□□ 1.89
C4A-250ENST00000469975 VPS8Q8N3P4 1428 aa26.85■■□□□ 1.89
C4A-250ENST00000469975 CNTLNQ9NXG0 1405 aa26.85■■□□□ 1.89
C4A-250ENST00000469975 CAMSAP2Q08AD1 1489 aa26.83■■□□□ 1.89
C4A-250ENST00000469975 GGT6Q6P531 493 aa26.79■■□□□ 1.88
C4A-250ENST00000469975 ZMYM3Q14202 1370 aa26.79■■□□□ 1.88
C4A-250ENST00000469975 LRRC9Q6ZRR7 1453 aa26.78■■□□□ 1.88
C4A-250ENST00000469975 CCDC141Q6ZP82 1450 aa26.76■■□□□ 1.87
C4A-250ENST00000469975 RTEL1-TNFRSF6BF6WH68 1400 aa26.74■■□□□ 1.87
C4A-250ENST00000469975 KANK4Q5T7N3 995 aaPredicted RBP26.73■■□□□ 1.87
C4A-250ENST00000469975 NPATQ14207 1427 aa26.72■■□□□ 1.87
C4A-250ENST00000469975 CERKQ8TCT0 537 aa26.71■■□□□ 1.87
C4A-250ENST00000469975 MYO3AQ8NEV4 1616 aa26.7■■□□□ 1.86
C4A-250ENST00000469975 DHX29Q7Z478 1369 aaKnown RBP26.7■■□□□ 1.86
C4A-250ENST00000469975 ARHGEF5Q12774 1597 aa26.69■■□□□ 1.86
C4A-250ENST00000469975 PTPRKQ15262 1439 aa26.68■■□□□ 1.86
C4A-250ENST00000469975 CAMSAP1Q5T5Y3 1602 aa26.67■■□□□ 1.86
C4A-250ENST00000469975 DMRT2Q9Y5R5 561 aa26.66■■□□□ 1.86
C4A-250ENST00000469975 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
C4A-250ENST00000469975 MAP3K1Q13233 1512 aa26.65■■□□□ 1.86
C4A-250ENST00000469975 ZNF142P52746 1687 aaPredicted RBP26.64■■□□□ 1.86
C4A-250ENST00000469975 KIF3BO15066 747 aa26.64■■□□□ 1.86
C4A-250ENST00000469975 PTPRTO14522 1441 aa26.62■■□□□ 1.85
C4A-250ENST00000469975 RSPH4AQ5TD94 716 aa26.61■■□□□ 1.85
C4A-250ENST00000469975 CEP170BQ9Y4F5 1589 aaPredicted RBP26.61■■□□□ 1.85
C4A-250ENST00000469975 MYOM3Q5VTT5 1437 aa26.59■■□□□ 1.85
C4A-250ENST00000469975 PPP6R1Q9UPN7 881 aa26.59■■□□□ 1.85
C4A-250ENST00000469975 TSPY4P0CV99 314 aa26.58■■□□□ 1.85
C4A-250ENST00000469975 TSPY10P0CW01 314 aa26.58■■□□□ 1.85
C4A-250ENST00000469975 NCKAP5LQ9HCH0 1330 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms