RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
TTC3-213ENST00000469939 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.76□□□□□ -0.85
TTC3-213ENST00000469939 EMP3P54852 163 aa9.75□□□□□ -0.85
TTC3-213ENST00000469939 GTPBP6O43824 516 aaPredicted RBP9.74□□□□□ -0.85
TTC3-213ENST00000469939 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
TTC3-213ENST00000469939 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
TTC3-213ENST00000469939 PPP1R37O75864 691 aa9.69□□□□□ -0.86
TTC3-213ENST00000469939 MMRN1Q13201 1228 aa9.69□□□□□ -0.86
TTC3-213ENST00000469939 SPRYD3Q8NCJ5 442 aa9.69□□□□□ -0.86
TTC3-213ENST00000469939 FAM205CA6NFA0 338 aa9.68□□□□□ -0.86
TTC3-213ENST00000469939 PAXIP1Q6ZW49 1069 aaPredicted RBP9.67□□□□□ -0.86
TTC3-213ENST00000469939 MICALL2Q8IY33 904 aa9.67□□□□□ -0.86
TTC3-213ENST00000469939 CFAP44Q96MT7 982 aa9.66□□□□□ -0.86
TTC3-213ENST00000469939 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.86
TTC3-213ENST00000469939 ZNF710Q8N1W2 664 aa9.63□□□□□ -0.87
TTC3-213ENST00000469939 POTEB3A0JP26 581 aa9.59□□□□□ -0.87
TTC3-213ENST00000469939 POTEBQ6S5H4 581 aa9.59□□□□□ -0.87
TTC3-213ENST00000469939 HOXB3P14651 431 aaPredicted RBP9.58□□□□□ -0.88
TTC3-213ENST00000469939 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
TTC3-213ENST00000469939 DOK7Q18PE1 504 aa9.58□□□□□ -0.88
TTC3-213ENST00000469939 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
TTC3-213ENST00000469939 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
TTC3-213ENST00000469939 RIMBP2O15034 1052 aa9.55□□□□□ -0.88
TTC3-213ENST00000469939 ERBB3P21860 1342 aa9.55□□□□□ -0.88
TTC3-213ENST00000469939 HOXB1P14653 301 aaPredicted RBP9.54□□□□□ -0.88
TTC3-213ENST00000469939 TMEM92Q6UXU6 159 aa9.54□□□□□ -0.88
TTC3-213ENST00000469939 TMC2Q8TDI7 906 aa9.51□□□□□ -0.89
TTC3-213ENST00000469939 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
TTC3-213ENST00000469939 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
TTC3-213ENST00000469939 KIF3CO14782 793 aa9.49□□□□□ -0.89
TTC3-213ENST00000469939 GPHNQ9NQX3 736 aaPredicted RBP9.48□□□□□ -0.89
TTC3-213ENST00000469939 PDE4AP27815 886 aa9.47□□□□□ -0.89
TTC3-213ENST00000469939 CRISPLD2Q9H0B8 497 aa9.47□□□□□ -0.89
TTC3-213ENST00000469939 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
TTC3-213ENST00000469939 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
TTC3-213ENST00000469939 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.9
TTC3-213ENST00000469939 HAP1P54257 671 aaPredicted RBP9.43□□□□□ -0.9
TTC3-213ENST00000469939 FOXK1P85037 733 aa9.43□□□□□ -0.9
TTC3-213ENST00000469939 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
TTC3-213ENST00000469939 ZSWIM6Q9HCJ5 1215 aa9.43□□□□□ -0.9
TTC3-213ENST00000469939 DSG2Q14126 1118 aa9.42□□□□□ -0.9
TTC3-213ENST00000469939 MFSD10Q14728 455 aa9.4□□□□□ -0.9
TTC3-213ENST00000469939 DDX27Q96GQ7 796 aaKnown RBP9.4□□□□□ -0.9
TTC3-213ENST00000469939 PPP1R15BQ5SWA1 713 aa9.39□□□□□ -0.91
TTC3-213ENST00000469939 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
TTC3-213ENST00000469939 RNF166Q96A37 237 aaPredicted RBP9.38□□□□□ -0.91
TTC3-213ENST00000469939 GPR153Q6NV75 609 aa9.37□□□□□ -0.91
TTC3-213ENST00000469939 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
TTC3-213ENST00000469939 ARSIQ5FYB1 569 aa9.36□□□□□ -0.91
TTC3-213ENST00000469939 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
TTC3-213ENST00000469939 MYT1LQ9UL68 1186 aa9.35□□□□□ -0.91
TTC3-213ENST00000469939 PRKCSHP14314 528 aaPredicted RBP9.34□□□□□ -0.91
TTC3-213ENST00000469939 SLC34A2O95436 690 aa9.33□□□□□ -0.92
TTC3-213ENST00000469939 BCANQ96GW7 911 aa9.33□□□□□ -0.92
TTC3-213ENST00000469939 KHSRPQ92945 711 aaKnown RBP eCLIP9.31□□□□□ -0.92
TTC3-213ENST00000469939 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
TTC3-213ENST00000469939 ZNF316A6NFI3 1004 aaPredicted RBP9.29□□□□□ -0.92
TTC3-213ENST00000469939 CAMK2BQ13554 666 aa9.29□□□□□ -0.92
TTC3-213ENST00000469939 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
TTC3-213ENST00000469939 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
TTC3-213ENST00000469939 E2F4Q16254 413 aa9.28□□□□□ -0.92
TTC3-213ENST00000469939 PCDHGA4Q9Y5G9 962 aa9.28□□□□□ -0.92
TTC3-213ENST00000469939 KDM2AQ9Y2K7 1162 aa9.27□□□□□ -0.93
TTC3-213ENST00000469939 PTGER2P43116 358 aa9.26□□□□□ -0.93
TTC3-213ENST00000469939 OXER1Q8TDS5 423 aa9.26□□□□□ -0.93
TTC3-213ENST00000469939 UPF1Q92900 1129 aaKnown RBP eCLIP9.26□□□□□ -0.93
TTC3-213ENST00000469939 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
TTC3-213ENST00000469939 TBC1D12O60347 775 aa9.25□□□□□ -0.93
TTC3-213ENST00000469939 NUDT7P0C024 238 aa9.24□□□□□ -0.93
TTC3-213ENST00000469939 MAP3K9P80192 1104 aa9.22□□□□□ -0.93
TTC3-213ENST00000469939 LSM11P83369 360 aaKnown RBP eCLIP9.22□□□□□ -0.93
TTC3-213ENST00000469939 DPYSL4O14531 572 aa9.19□□□□□ -0.94
TTC3-213ENST00000469939 P3H3Q8IVL6 736 aa9.19□□□□□ -0.94
TTC3-213ENST00000469939 KCNV2Q8TDN2 545 aa9.19□□□□□ -0.94
TTC3-213ENST00000469939 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
TTC3-213ENST00000469939 KDM4FA0A1W2PPD8 638 aa9.18□□□□□ -0.94
TTC3-213ENST00000469939 ARIH1Q9Y4X5 557 aaPredicted RBP9.18□□□□□ -0.94
TTC3-213ENST00000469939 EVI5O60447 810 aa9.17□□□□□ -0.94
TTC3-213ENST00000469939 PBX2P40425 430 aa9.17□□□□□ -0.94
TTC3-213ENST00000469939 AXIN2Q9Y2T1 843 aa9.17□□□□□ -0.94
TTC3-213ENST00000469939 ARHGEF1Q92888 912 aaKnown RBP9.16□□□□□ -0.94
TTC3-213ENST00000469939 ANO8Q9HCE9 1232 aaPredicted RBP9.14□□□□□ -0.95
TTC3-213ENST00000469939 SPDYE16A6NNV3 312 aaPredicted RBP9.13□□□□□ -0.95
TTC3-213ENST00000469939 PDIA6Q15084 440 aa9.13□□□□□ -0.95
TTC3-213ENST00000469939 TPRNQ4KMQ1 711 aa9.13□□□□□ -0.95
TTC3-213ENST00000469939 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
TTC3-213ENST00000469939 POTEEQ6S8J3 1075 aa9.1□□□□□ -0.95
TTC3-213ENST00000469939 ARHGAP33O14559 1287 aa9.08□□□□□ -0.96
TTC3-213ENST00000469939 JPH4Q96JJ6 628 aa9.07□□□□□ -0.96
TTC3-213ENST00000469939 FOSBP53539 338 aa9.06□□□□□ -0.96
TTC3-213ENST00000469939 ADGRD1Q6QNK2 874 aa9.06□□□□□ -0.96
TTC3-213ENST00000469939 ZNF454Q8N9F8 522 aa9.06□□□□□ -0.96
TTC3-213ENST00000469939 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
TTC3-213ENST00000469939 HCSTQ9UBK5 93 aa9.05□□□□□ -0.96
TTC3-213ENST00000469939 PHF14O94880 888 aa9.04□□□□□ -0.96
TTC3-213ENST00000469939 DDX12PQ92771 950 aa9.04□□□□□ -0.96
TTC3-213ENST00000469939 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
TTC3-213ENST00000469939 PCDHGA10Q9Y5H3 936 aa9.03□□□□□ -0.96
TTC3-213ENST00000469939 PSEN2P49810 448 aa9.02□□□□□ -0.97
TTC3-213ENST00000469939 ZDHHC16Q969W1 377 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms