RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 CFDP1Q9UEE9 299 aaPredicted RBP31.96■■■□□ 2.71
BRAF-202ENST00000469930 RRBP1Q9P2E9 1410 aaKnown RBP31.95■■■□□ 2.71
BRAF-202ENST00000469930 EFCAB2Q5VUJ9 269 aa31.95■■■□□ 2.71
BRAF-202ENST00000469930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.93■■■□□ 2.7
BRAF-202ENST00000469930 ARHGAP5Q13017 1502 aa31.91■■■□□ 2.7
BRAF-202ENST00000469930 TCOF1Q13428 1488 aaKnown RBP31.91■■■□□ 2.7
BRAF-202ENST00000469930 NEO1Q92859 1461 aa31.9■■■□□ 2.7
BRAF-202ENST00000469930 CFAP74Q9C0B2 1584 aa31.9■■■□□ 2.7
BRAF-202ENST00000469930 FANCAO15360 1455 aa31.89■■■□□ 2.7
BRAF-202ENST00000469930 TEX14Q8IWB6 1497 aa31.89■■■□□ 2.7
BRAF-202ENST00000469930 PPRC1Q5VV67 1664 aaKnown RBP31.88■■■□□ 2.69
BRAF-202ENST00000469930 TRHP20396 242 aaPredicted RBP31.87■■■□□ 2.69
BRAF-202ENST00000469930 PTPN23Q9H3S7 1636 aa31.86■■■□□ 2.69
BRAF-202ENST00000469930 PLEKHH2Q8IVE3 1493 aa31.85■■■□□ 2.69
BRAF-202ENST00000469930 KIAA1107Q9UPP5 1409 aa31.85■■■□□ 2.69
BRAF-202ENST00000469930 SAMD9LQ8IVG5 1584 aa31.82■■■□□ 2.68
BRAF-202ENST00000469930 AKNAQ7Z591 1439 aa31.81■■■□□ 2.68
BRAF-202ENST00000469930 CAMSAP2Q08AD1 1489 aa31.8■■■□□ 2.68
BRAF-202ENST00000469930 RSPH4AQ5TD94 716 aa31.77■■■□□ 2.68
BRAF-202ENST00000469930 ZNF644Q9H582 1327 aaPredicted RBP31.76■■■□□ 2.68
BRAF-202ENST00000469930 TSPOAP1O95153 1857 aa31.76■■■□□ 2.68
BRAF-202ENST00000469930 ABCC1P33527 1531 aa31.76■■■□□ 2.68
BRAF-202ENST00000469930 ZNF777Q9ULD5 760 aaPredicted RBP31.76■■■□□ 2.67
BRAF-202ENST00000469930 MBD5Q9P267 1494 aa31.74■■■□□ 2.67
BRAF-202ENST00000469930 ARHGEF5Q12774 1597 aa31.73■■■□□ 2.67
BRAF-202ENST00000469930 ADGRL1O94910 1474 aa31.72■■■□□ 2.67
BRAF-202ENST00000469930 ARHGEF12Q9NZN5 1544 aa31.7■■■□□ 2.66
BRAF-202ENST00000469930 TRIM26Q12899 539 aaPredicted RBP31.69■■■□□ 2.66
BRAF-202ENST00000469930 FAM50AQ14320 339 aaKnown RBP31.69■■■□□ 2.66
BRAF-202ENST00000469930 SCAPERQ9BY12 1400 aa31.68■■■□□ 2.66
BRAF-202ENST00000469930 SYCP2Q9BX26 1530 aa31.66■■■□□ 2.66
BRAF-202ENST00000469930 DNMT1P26358 1616 aaKnown RBP31.65■■■□□ 2.66
BRAF-202ENST00000469930 HNRNPMP52272 730 aaKnown RBP eCLIP31.64■■■□□ 2.66
BRAF-202ENST00000469930 DENND4BO75064 1496 aaPredicted RBP31.63■■■□□ 2.65
BRAF-202ENST00000469930 ABCC5O15440 1437 aa31.62■■■□□ 2.65
BRAF-202ENST00000469930 CCDC141Q6ZP82 1450 aa31.62■■■□□ 2.65
BRAF-202ENST00000469930 DAPK1P53355 1430 aa31.61■■■□□ 2.65
BRAF-202ENST00000469930 POGZQ7Z3K3 1410 aa31.6■■■□□ 2.65
BRAF-202ENST00000469930 TRAPPC8Q9Y2L5 1435 aa31.6■■■□□ 2.65
BRAF-202ENST00000469930 ZNF518AQ6AHZ1 1483 aa31.59■■■□□ 2.65
BRAF-202ENST00000469930 SHANK2Q9UPX8 1470 aa31.59■■■□□ 2.65
BRAF-202ENST00000469930 KDM5CP41229 1560 aa31.56■■■□□ 2.64
BRAF-202ENST00000469930 MAST1Q9Y2H9 1570 aa31.55■■■□□ 2.64
BRAF-202ENST00000469930 RICTORQ6R327 1708 aa31.55■■■□□ 2.64
BRAF-202ENST00000469930 CROCC2H7BZ55 1655 aa31.54■■■□□ 2.64
BRAF-202ENST00000469930 COL17A1Q9UMD9 1497 aaPredicted RBP31.53■■■□□ 2.64
BRAF-202ENST00000469930 RTEL1-TNFRSF6BF6WH68 1400 aa31.53■■■□□ 2.64
BRAF-202ENST00000469930 TSPY4P0CV99 314 aa31.53■■■□□ 2.64
BRAF-202ENST00000469930 TSPY10P0CW01 314 aa31.53■■■□□ 2.64
BRAF-202ENST00000469930 AFAP1Q8N556 730 aa31.52■■■□□ 2.64
BRAF-202ENST00000469930 PTPRKQ15262 1439 aa31.51■■■□□ 2.64
BRAF-202ENST00000469930 MLH3Q9UHC1 1453 aa31.5■■■□□ 2.63
BRAF-202ENST00000469930 FRMPD1Q5SYB0 1578 aa31.5■■■□□ 2.63
BRAF-202ENST00000469930 ZMYM4Q5VZL5 1548 aa31.49■■■□□ 2.63
BRAF-202ENST00000469930 ROCK1Q13464 1354 aa31.48■■■□□ 2.63
BRAF-202ENST00000469930 ADGRL2O95490 1459 aa31.47■■■□□ 2.63
BRAF-202ENST00000469930 RAPGEF3O95398 923 aa31.47■■■□□ 2.63
BRAF-202ENST00000469930 C9orf84Q5VXU9 1444 aa31.47■■■□□ 2.63
BRAF-202ENST00000469930 MAGI2Q86UL8 1455 aa31.46■■■□□ 2.63
BRAF-202ENST00000469930 SPAG9O60271 1321 aaKnown RBP31.46■■■□□ 2.63
BRAF-202ENST00000469930 KDM6BO15054 1643 aa31.44■■■□□ 2.62
BRAF-202ENST00000469930 INO80Q9ULG1 1556 aaPredicted RBP31.43■■■□□ 2.62
BRAF-202ENST00000469930 ZFYVE16Q7Z3T8 1539 aa31.41■■■□□ 2.62
BRAF-202ENST00000469930 HECW2Q9P2P5 1572 aa31.41■■■□□ 2.62
BRAF-202ENST00000469930 NCOA1Q15788 1441 aa31.41■■■□□ 2.62
BRAF-202ENST00000469930 ITGAEP38570 1179 aa31.4■■■□□ 2.62
BRAF-202ENST00000469930 ADGBQ8N7X0 1667 aa31.4■■■□□ 2.62
BRAF-202ENST00000469930 ANKRD30AQ9BXX3 1397 aa31.4■■■□□ 2.62
BRAF-202ENST00000469930 ATP7AQ04656 1500 aa31.39■■■□□ 2.62
BRAF-202ENST00000469930 PLXNC1O60486 1568 aa31.39■■■□□ 2.61
BRAF-202ENST00000469930 KIDINS220Q9ULH0 1771 aa31.38■■■□□ 2.61
BRAF-202ENST00000469930 CHIC2Q9UKJ5 165 aa31.34■■■□□ 2.61
BRAF-202ENST00000469930 HFM1A2PYH4 1435 aa31.32■■■□□ 2.6
BRAF-202ENST00000469930 NAIPQ13075 1403 aa31.27■■■□□ 2.6
BRAF-202ENST00000469930 KIF15Q9NS87 1388 aa31.27■■■□□ 2.6
BRAF-202ENST00000469930 DUOX2Q9NRD8 1548 aa31.26■■■□□ 2.59
BRAF-202ENST00000469930 PCGF6Q9BYE7 350 aa31.25■■■□□ 2.59
BRAF-202ENST00000469930 DIP2CQ9Y2E4 1556 aa31.25■■■□□ 2.59
BRAF-202ENST00000469930 YEATS2Q9ULM3 1422 aa31.24■■■□□ 2.59
BRAF-202ENST00000469930 ABCA6Q8N139 1617 aa31.24■■■□□ 2.59
BRAF-202ENST00000469930 RRP7BPQ9NSQ0 103 aa31.24■■■□□ 2.59
BRAF-202ENST00000469930 REREQ9P2R6 1566 aa31.24■■■□□ 2.59
BRAF-202ENST00000469930 GCC2Q8IWJ2 1684 aa31.23■■■□□ 2.59
BRAF-202ENST00000469930 ATP10AO60312 1499 aa31.23■■■□□ 2.59
BRAF-202ENST00000469930 DHX29Q7Z478 1369 aaKnown RBP31.23■■■□□ 2.59
BRAF-202ENST00000469930 ARHGEF40Q8TER5 1519 aa31.23■■■□□ 2.59
BRAF-202ENST00000469930 MYT1LQ9UL68 1186 aa31.22■■■□□ 2.59
BRAF-202ENST00000469930 HRCP23327 699 aa31.2■■■□□ 2.59
BRAF-202ENST00000469930 ERBINQ96RT1 1412 aa31.2■■■□□ 2.59
BRAF-202ENST00000469930 SETD5Q9C0A6 1442 aa31.2■■■□□ 2.59
BRAF-202ENST00000469930 A2MP01023 1474 aa31.2■■■□□ 2.58
BRAF-202ENST00000469930 ACIN1Q9UKV3 1341 aaKnown RBP31.19■■■□□ 2.58
BRAF-202ENST00000469930 ANKRD50Q9ULJ7 1429 aa31.18■■■□□ 2.58
BRAF-202ENST00000469930 AGLP35573 1532 aa31.13■■■□□ 2.57
BRAF-202ENST00000469930 EIF2AK4Q9P2K8 1649 aaKnown RBP31.13■■■□□ 2.57
BRAF-202ENST00000469930 BCORL1Q5H9F3 1711 aa31.12■■■□□ 2.57
BRAF-202ENST00000469930 RAB3GAP2Q9H2M9 1393 aa31.07■■■□□ 2.56
BRAF-202ENST00000469930 DEPDC5O75140 1603 aa30.99■■■□□ 2.55
BRAF-202ENST00000469930 RNF17Q9BXT8 1623 aaKnown RBP30.99■■■□□ 2.55
BRAF-202ENST00000469930 UNC13BO14795 1591 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms