RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 PTPRMP28827 1452 aa22.12■■□□□ 1.13
EFNA1-203ENST00000469878 POGZQ7Z3K3 1410 aa22.12■■□□□ 1.13
EFNA1-203ENST00000469878 SCAPERQ9BY12 1400 aa22.12■■□□□ 1.13
EFNA1-203ENST00000469878 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
EFNA1-203ENST00000469878 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
EFNA1-203ENST00000469878 RIMS1Q86UR5 1692 aaKnown RBP22.08■■□□□ 1.13
EFNA1-203ENST00000469878 CLIP1P30622 1438 aa22.08■■□□□ 1.13
EFNA1-203ENST00000469878 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.13
EFNA1-203ENST00000469878 CDC42BPBQ9Y5S2 1711 aa22.08■■□□□ 1.12
EFNA1-203ENST00000469878 CCDC18Q5T9S5 1454 aa22.07■■□□□ 1.12
EFNA1-203ENST00000469878 FYCO1Q9BQS8 1478 aa22.05■■□□□ 1.12
EFNA1-203ENST00000469878 PREX2Q70Z35 1606 aa22.04■■□□□ 1.12
EFNA1-203ENST00000469878 MAGI2Q86UL8 1455 aa22.03■■□□□ 1.12
EFNA1-203ENST00000469878 EFCAB2Q5VUJ9 269 aa22.03■■□□□ 1.12
EFNA1-203ENST00000469878 CDC42BPAQ5VT25 1732 aa22■■□□□ 1.11
EFNA1-203ENST00000469878 KDM5CP41229 1560 aa21.99■■□□□ 1.11
EFNA1-203ENST00000469878 ZNF518AQ6AHZ1 1483 aa21.97■■□□□ 1.11
EFNA1-203ENST00000469878 ABCC1P33527 1531 aa21.97■■□□□ 1.11
EFNA1-203ENST00000469878 ARHGEF12Q9NZN5 1544 aa21.97■■□□□ 1.11
EFNA1-203ENST00000469878 ITSN2Q9NZM3 1697 aa21.96■■□□□ 1.11
EFNA1-203ENST00000469878 AFAP1Q8N556 730 aa21.96■■□□□ 1.11
EFNA1-203ENST00000469878 FER1L4A9Z1Z3 1794 aa21.96■■□□□ 1.11
EFNA1-203ENST00000469878 MLECQ14165 292 aa21.95■■□□□ 1.1
EFNA1-203ENST00000469878 ATP10AO60312 1499 aa21.95■■□□□ 1.1
EFNA1-203ENST00000469878 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
EFNA1-203ENST00000469878 DIP2CQ9Y2E4 1556 aa21.94■■□□□ 1.1
EFNA1-203ENST00000469878 ABCA6Q8N139 1617 aa21.94■■□□□ 1.1
EFNA1-203ENST00000469878 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
EFNA1-203ENST00000469878 TRAPPC8Q9Y2L5 1435 aa21.93■■□□□ 1.1
EFNA1-203ENST00000469878 LMTK3Q96Q04 1460 aa21.91■■□□□ 1.1
EFNA1-203ENST00000469878 SAMD9LQ8IVG5 1584 aa21.91■■□□□ 1.1
EFNA1-203ENST00000469878 CEP162Q5TB80 1403 aa21.89■■□□□ 1.09
EFNA1-203ENST00000469878 GPATCH8Q9UKJ3 1502 aaKnown RBP21.87■■□□□ 1.09
EFNA1-203ENST00000469878 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
EFNA1-203ENST00000469878 SYCP2Q9BX26 1530 aa21.85■■□□□ 1.09
EFNA1-203ENST00000469878 MLH3Q9UHC1 1453 aa21.85■■□□□ 1.09
EFNA1-203ENST00000469878 ILDR1Q86SU0 546 aaPredicted RBP21.84■■□□□ 1.09
EFNA1-203ENST00000469878 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
EFNA1-203ENST00000469878 REREQ9P2R6 1566 aa21.83■■□□□ 1.09
EFNA1-203ENST00000469878 ZNF777Q9ULD5 760 aaPredicted RBP21.83■■□□□ 1.09
EFNA1-203ENST00000469878 TIAM1Q13009 1591 aa21.79■■□□□ 1.08
EFNA1-203ENST00000469878 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
EFNA1-203ENST00000469878 HSPA2P54652 639 aa21.79■■□□□ 1.08
EFNA1-203ENST00000469878 EHBP1L1Q8N3D4 1523 aa21.78■■□□□ 1.08
EFNA1-203ENST00000469878 CEBPAP49715 358 aaPredicted RBP21.77■■□□□ 1.08
EFNA1-203ENST00000469878 CCNB3Q8WWL7 1395 aa21.76■■□□□ 1.07
EFNA1-203ENST00000469878 HNRNPMP52272 730 aaKnown RBP eCLIP21.75■■□□□ 1.07
EFNA1-203ENST00000469878 AGLP35573 1532 aa21.75■■□□□ 1.07
EFNA1-203ENST00000469878 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
EFNA1-203ENST00000469878 INO80Q9ULG1 1556 aaPredicted RBP21.74■■□□□ 1.07
EFNA1-203ENST00000469878 PREX1Q8TCU6 1659 aa21.73■■□□□ 1.07
EFNA1-203ENST00000469878 CFDP1Q9UEE9 299 aaPredicted RBP21.73■■□□□ 1.07
EFNA1-203ENST00000469878 C3P01024 1663 aa21.72■■□□□ 1.07
EFNA1-203ENST00000469878 ATP7AQ04656 1500 aa21.72■■□□□ 1.07
EFNA1-203ENST00000469878 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
EFNA1-203ENST00000469878 SUPT6HQ7KZ85 1726 aaKnown RBP21.7■■□□□ 1.06
EFNA1-203ENST00000469878 KIAA1107Q9UPP5 1409 aa21.69■■□□□ 1.06
EFNA1-203ENST00000469878 SPAG9O60271 1321 aaKnown RBP21.68■■□□□ 1.06
EFNA1-203ENST00000469878 PLEKHH2Q8IVE3 1493 aa21.68■■□□□ 1.06
EFNA1-203ENST00000469878 PLXNC1O60486 1568 aa21.66■■□□□ 1.06
EFNA1-203ENST00000469878 NCOA2Q15596 1464 aa21.65■■□□□ 1.06
EFNA1-203ENST00000469878 MBD5Q9P267 1494 aa21.64■■□□□ 1.06
EFNA1-203ENST00000469878 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
EFNA1-203ENST00000469878 A2MP01023 1474 aa21.61■■□□□ 1.05
EFNA1-203ENST00000469878 CAMSAP2Q08AD1 1489 aa21.6■■□□□ 1.05
EFNA1-203ENST00000469878 CLTCQ00610 1675 aaKnown RBP21.6■■□□□ 1.05
EFNA1-203ENST00000469878 ADGBQ8N7X0 1667 aa21.6■■□□□ 1.05
EFNA1-203ENST00000469878 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
EFNA1-203ENST00000469878 UHRF1BP1Q6BDS2 1440 aa21.58■■□□□ 1.05
EFNA1-203ENST00000469878 MROH2AA6NES4 1674 aa21.58■■□□□ 1.05
EFNA1-203ENST00000469878 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
EFNA1-203ENST00000469878 ESF1Q9H501 851 aaKnown RBP21.56■■□□□ 1.04
EFNA1-203ENST00000469878 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
EFNA1-203ENST00000469878 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
EFNA1-203ENST00000469878 CCDC141Q6ZP82 1450 aa21.52■■□□□ 1.04
EFNA1-203ENST00000469878 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
EFNA1-203ENST00000469878 ZMYM3Q14202 1370 aa21.5■■□□□ 1.03
EFNA1-203ENST00000469878 FBXO41Q8TF61 875 aa21.5■■□□□ 1.03
EFNA1-203ENST00000469878 RTEL1-TNFRSF6BF6WH68 1400 aa21.49■■□□□ 1.03
EFNA1-203ENST00000469878 GGT6Q6P531 493 aa21.49■■□□□ 1.03
EFNA1-203ENST00000469878 ARHGEF5Q12774 1597 aa21.48■■□□□ 1.03
EFNA1-203ENST00000469878 MYO3AQ8NEV4 1616 aa21.47■■□□□ 1.03
EFNA1-203ENST00000469878 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
EFNA1-203ENST00000469878 NPATQ14207 1427 aa21.46■■□□□ 1.03
EFNA1-203ENST00000469878 DHX29Q7Z478 1369 aaKnown RBP21.45■■□□□ 1.02
EFNA1-203ENST00000469878 PTPRKQ15262 1439 aa21.44■■□□□ 1.02
EFNA1-203ENST00000469878 ZNF142P52746 1687 aaPredicted RBP21.42■■□□□ 1.02
EFNA1-203ENST00000469878 CAMSAP1Q5T5Y3 1602 aa21.41■■□□□ 1.02
EFNA1-203ENST00000469878 NCOA1Q15788 1441 aa21.41■■□□□ 1.02
EFNA1-203ENST00000469878 MYOM3Q5VTT5 1437 aa21.4■■□□□ 1.02
EFNA1-203ENST00000469878 CERKQ8TCT0 537 aa21.39■■□□□ 1.01
EFNA1-203ENST00000469878 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.01
EFNA1-203ENST00000469878 KIF3BO15066 747 aa21.38■■□□□ 1.01
EFNA1-203ENST00000469878 MAST1Q9Y2H9 1570 aa21.38■■□□□ 1.01
EFNA1-203ENST00000469878 KDM5DQ9BY66 1539 aa21.36■■□□□ 1.01
EFNA1-203ENST00000469878 PTPRTO14522 1441 aa21.36■■□□□ 1.01
EFNA1-203ENST00000469878 RSPH4AQ5TD94 716 aa21.35■■□□□ 1.01
EFNA1-203ENST00000469878 MIA2Q96PC5 1412 aa21.34■■□□□ 1.01
EFNA1-203ENST00000469878 DMRT2Q9Y5R5 561 aa21.33■■□□□ 1.01
EFNA1-203ENST00000469878 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms