RNA–Protein interactions for RNA: ENST00000469851.1

PKD1-206, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 661 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-206ENST00000469851 CCDC18Q5T9S5 1454 aa28.75■■■□□ 2.19
PKD1-206ENST00000469851 POGZQ7Z3K3 1410 aa28.75■■■□□ 2.19
PKD1-206ENST00000469851 ZFYVE16Q7Z3T8 1539 aa28.74■■■□□ 2.19
PKD1-206ENST00000469851 SCAPERQ9BY12 1400 aa28.74■■■□□ 2.19
PKD1-206ENST00000469851 MADDQ8WXG6 1647 aa28.73■■■□□ 2.19
PKD1-206ENST00000469851 ARID4BQ4LE39 1312 aaPredicted RBP28.72■■■□□ 2.19
PKD1-206ENST00000469851 EFCAB2Q5VUJ9 269 aa28.72■■■□□ 2.19
PKD1-206ENST00000469851 YEATS2Q9ULM3 1422 aa28.7■■■□□ 2.19
PKD1-206ENST00000469851 FYCO1Q9BQS8 1478 aa28.68■■■□□ 2.18
PKD1-206ENST00000469851 SIGLEC1Q9BZZ2 1709 aa28.68■■■□□ 2.18
PKD1-206ENST00000469851 ARHGAP5Q13017 1502 aa28.67■■■□□ 2.18
PKD1-206ENST00000469851 CDC42BPBQ9Y5S2 1711 aa28.66■■■□□ 2.18
PKD1-206ENST00000469851 PREX2Q70Z35 1606 aa28.63■■■□□ 2.17
PKD1-206ENST00000469851 RIMS1Q86UR5 1692 aaKnown RBP28.63■■■□□ 2.17
PKD1-206ENST00000469851 ZNF518AQ6AHZ1 1483 aa28.62■■■□□ 2.17
PKD1-206ENST00000469851 KDM5CP41229 1560 aa28.61■■■□□ 2.17
PKD1-206ENST00000469851 ATP10AO60312 1499 aa28.58■■■□□ 2.17
PKD1-206ENST00000469851 CDC42BPAQ5VT25 1732 aa28.56■■■□□ 2.16
PKD1-206ENST00000469851 C9orf84Q5VXU9 1444 aa28.55■■■□□ 2.16
PKD1-206ENST00000469851 FER1L4A9Z1Z3 1794 aa28.52■■■□□ 2.16
PKD1-206ENST00000469851 ABCC1P33527 1531 aa28.52■■■□□ 2.16
PKD1-206ENST00000469851 ITSN2Q9NZM3 1697 aa28.51■■■□□ 2.15
PKD1-206ENST00000469851 AFAP1Q8N556 730 aa28.5■■■□□ 2.15
PKD1-206ENST00000469851 ARHGEF12Q9NZN5 1544 aa28.48■■■□□ 2.15
PKD1-206ENST00000469851 MLH3Q9UHC1 1453 aa28.47■■■□□ 2.15
PKD1-206ENST00000469851 DIP2CQ9Y2E4 1556 aa28.47■■■□□ 2.15
PKD1-206ENST00000469851 LMTK3Q96Q04 1460 aa28.46■■■□□ 2.15
PKD1-206ENST00000469851 REREQ9P2R6 1566 aa28.46■■■□□ 2.15
PKD1-206ENST00000469851 TRAPPC8Q9Y2L5 1435 aa28.43■■■□□ 2.14
PKD1-206ENST00000469851 ABCA6Q8N139 1617 aa28.43■■■□□ 2.14
PKD1-206ENST00000469851 MLECQ14165 292 aa28.43■■■□□ 2.14
PKD1-206ENST00000469851 GPATCH8Q9UKJ3 1502 aaKnown RBP28.41■■■□□ 2.14
PKD1-206ENST00000469851 SAMD9LQ8IVG5 1584 aa28.39■■■□□ 2.14
PKD1-206ENST00000469851 KIDINS220Q9ULH0 1771 aa28.38■■■□□ 2.13
PKD1-206ENST00000469851 ILDR1Q86SU0 546 aaPredicted RBP28.38■■■□□ 2.13
PKD1-206ENST00000469851 CEP162Q5TB80 1403 aa28.37■■■□□ 2.13
PKD1-206ENST00000469851 MYT1LQ9UL68 1186 aa28.36■■■□□ 2.13
PKD1-206ENST00000469851 AGLP35573 1532 aa28.34■■■□□ 2.13
PKD1-206ENST00000469851 MTUS2Q5JR59 1369 aa28.33■■■□□ 2.13
PKD1-206ENST00000469851 SYCP2Q9BX26 1530 aa28.33■■■□□ 2.13
PKD1-206ENST00000469851 PLPPR3Q6T4P5 718 aa28.31■■■□□ 2.12
PKD1-206ENST00000469851 EHBP1L1Q8N3D4 1523 aa28.3■■■□□ 2.12
PKD1-206ENST00000469851 KIAA1107Q9UPP5 1409 aa28.3■■■□□ 2.12
PKD1-206ENST00000469851 CCNB3Q8WWL7 1395 aa28.3■■■□□ 2.12
PKD1-206ENST00000469851 PLEKHH2Q8IVE3 1493 aa28.29■■■□□ 2.12
PKD1-206ENST00000469851 ZNF777Q9ULD5 760 aaPredicted RBP28.29■■■□□ 2.12
PKD1-206ENST00000469851 PREX1Q8TCU6 1659 aa28.28■■■□□ 2.12
PKD1-206ENST00000469851 TIAM1Q13009 1591 aa28.26■■■□□ 2.11
PKD1-206ENST00000469851 CFDP1Q9UEE9 299 aaPredicted RBP28.26■■■□□ 2.11
PKD1-206ENST00000469851 HNRNPMP52272 730 aaKnown RBP eCLIP28.22■■■□□ 2.11
PKD1-206ENST00000469851 HSPA2P54652 639 aa28.22■■■□□ 2.11
PKD1-206ENST00000469851 INO80Q9ULG1 1556 aaPredicted RBP28.22■■■□□ 2.11
PKD1-206ENST00000469851 SPAG9O60271 1321 aaKnown RBP28.21■■■□□ 2.11
PKD1-206ENST00000469851 ATP7AQ04656 1500 aa28.21■■■□□ 2.11
PKD1-206ENST00000469851 SETD1BQ9UPS6 1966 aaKnown RBP28.2■■■□□ 2.11
PKD1-206ENST00000469851 C3P01024 1663 aa28.2■■■□□ 2.11
PKD1-206ENST00000469851 CEBPAP49715 358 aaPredicted RBP28.2■■■□□ 2.1
PKD1-206ENST00000469851 PLXNC1O60486 1568 aa28.16■■■□□ 2.1
PKD1-206ENST00000469851 CNTLNQ9NXG0 1405 aa28.15■■■□□ 2.1
PKD1-206ENST00000469851 SUPT6HQ7KZ85 1726 aaKnown RBP28.15■■■□□ 2.1
PKD1-206ENST00000469851 ESF1Q9H501 851 aaKnown RBP28.12■■■□□ 2.09
PKD1-206ENST00000469851 MBD5Q9P267 1494 aa28.12■■■□□ 2.09
PKD1-206ENST00000469851 MROH2AA6NES4 1674 aa28.12■■■□□ 2.09
PKD1-206ENST00000469851 UHRF1BP1Q6BDS2 1440 aa28.11■■■□□ 2.09
PKD1-206ENST00000469851 ADGBQ8N7X0 1667 aa28.11■■■□□ 2.09
PKD1-206ENST00000469851 A2MP01023 1474 aa28.1■■■□□ 2.09
PKD1-206ENST00000469851 ZNF644Q9H582 1327 aaPredicted RBP28.1■■■□□ 2.09
PKD1-206ENST00000469851 NCOA2Q15596 1464 aa28.09■■■□□ 2.09
PKD1-206ENST00000469851 VPS8Q8N3P4 1428 aa28.09■■■□□ 2.09
PKD1-206ENST00000469851 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
PKD1-206ENST00000469851 FBXO41Q8TF61 875 aa28.07■■■□□ 2.08
PKD1-206ENST00000469851 RTEL1-TNFRSF6BF6WH68 1400 aa28.05■■■□□ 2.08
PKD1-206ENST00000469851 STRCQ7RTU9 1775 aa28.04■■■□□ 2.08
PKD1-206ENST00000469851 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
PKD1-206ENST00000469851 LRRC9Q6ZRR7 1453 aa28.01■■■□□ 2.07
PKD1-206ENST00000469851 NPATQ14207 1427 aa28.01■■■□□ 2.07
PKD1-206ENST00000469851 CLTCQ00610 1675 aaKnown RBP28■■■□□ 2.07
PKD1-206ENST00000469851 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
PKD1-206ENST00000469851 CCDC141Q6ZP82 1450 aa27.99■■■□□ 2.07
PKD1-206ENST00000469851 ZMYM3Q14202 1370 aa27.98■■■□□ 2.07
PKD1-206ENST00000469851 RSPH4AQ5TD94 716 aa27.96■■■□□ 2.07
PKD1-206ENST00000469851 ARHGEF5Q12774 1597 aa27.95■■■□□ 2.07
PKD1-206ENST00000469851 PPP6R1Q9UPN7 881 aa27.94■■■□□ 2.06
PKD1-206ENST00000469851 DMRT2Q9Y5R5 561 aa27.94■■■□□ 2.06
PKD1-206ENST00000469851 DHX29Q7Z478 1369 aaKnown RBP27.93■■■□□ 2.06
PKD1-206ENST00000469851 GGT6Q6P531 493 aa27.91■■■□□ 2.06
PKD1-206ENST00000469851 ZNF142P52746 1687 aaPredicted RBP27.87■■■□□ 2.05
PKD1-206ENST00000469851 PTPRTO14522 1441 aa27.87■■■□□ 2.05
PKD1-206ENST00000469851 PTPRKQ15262 1439 aa27.86■■■□□ 2.05
PKD1-206ENST00000469851 MYO3AQ8NEV4 1616 aa27.86■■■□□ 2.05
PKD1-206ENST00000469851 CERKQ8TCT0 537 aa27.86■■■□□ 2.05
PKD1-206ENST00000469851 NCOA1Q15788 1441 aa27.85■■■□□ 2.05
PKD1-206ENST00000469851 FAM135AQ9P2D6 1515 aa27.85■■■□□ 2.05
PKD1-206ENST00000469851 KANK4Q5T7N3 995 aaPredicted RBP27.84■■■□□ 2.05
PKD1-206ENST00000469851 CAMSAP1Q5T5Y3 1602 aa27.82■■■□□ 2.04
PKD1-206ENST00000469851 MIA2Q96PC5 1412 aa27.82■■■□□ 2.04
PKD1-206ENST00000469851 MAST1Q9Y2H9 1570 aa27.82■■■□□ 2.04
PKD1-206ENST00000469851 MYOM3Q5VTT5 1437 aa27.81■■■□□ 2.04
PKD1-206ENST00000469851 TSPY4P0CV99 314 aa27.8■■■□□ 2.04
PKD1-206ENST00000469851 TSPY10P0CW01 314 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms