RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 PHLDB1Q86UU1 1377 aa40.05■■■■■ 4
KPNA4-202ENST00000469804 KANK4Q5T7N3 995 aaPredicted RBP40.01■■■■■ 4
KPNA4-202ENST00000469804 FRMPD1Q5SYB0 1578 aa40.01■■■■□ 3.99
KPNA4-202ENST00000469804 GPATCH8Q9UKJ3 1502 aaKnown RBP40.01■■■■□ 3.99
KPNA4-202ENST00000469804 RICTORQ6R327 1708 aa39.98■■■■□ 3.99
KPNA4-202ENST00000469804 NCOA2Q15596 1464 aa39.98■■■■□ 3.99
KPNA4-202ENST00000469804 ADGRL1O94910 1474 aa39.97■■■■□ 3.99
KPNA4-202ENST00000469804 EFCAB2Q5VUJ9 269 aa39.97■■■■□ 3.99
KPNA4-202ENST00000469804 ITSN2Q9NZM3 1697 aa39.96■■■■□ 3.99
KPNA4-202ENST00000469804 CCNB3Q8WWL7 1395 aa39.96■■■■□ 3.99
KPNA4-202ENST00000469804 APLP2Q06481 763 aa39.95■■■■□ 3.99
KPNA4-202ENST00000469804 RAPGEF3O95398 923 aa39.92■■■■□ 3.98
KPNA4-202ENST00000469804 DENND4BO75064 1496 aaPredicted RBP39.92■■■■□ 3.98
KPNA4-202ENST00000469804 SCAPERQ9BY12 1400 aa39.9■■■■□ 3.98
KPNA4-202ENST00000469804 SAMD9LQ8IVG5 1584 aa39.89■■■■□ 3.98
KPNA4-202ENST00000469804 ABCC1P33527 1531 aa39.86■■■■□ 3.97
KPNA4-202ENST00000469804 ZNF777Q9ULD5 760 aaPredicted RBP39.82■■■■□ 3.97
KPNA4-202ENST00000469804 POGZQ7Z3K3 1410 aa39.82■■■■□ 3.96
KPNA4-202ENST00000469804 CFDP1Q9UEE9 299 aaPredicted RBP39.8■■■■□ 3.96
KPNA4-202ENST00000469804 ARHGEF12Q9NZN5 1544 aa39.8■■■■□ 3.96
KPNA4-202ENST00000469804 ZMYM4Q5VZL5 1548 aa39.75■■■■□ 3.95
KPNA4-202ENST00000469804 SYCP2Q9BX26 1530 aa39.75■■■■□ 3.95
KPNA4-202ENST00000469804 TRAPPC8Q9Y2L5 1435 aa39.7■■■■□ 3.95
KPNA4-202ENST00000469804 ZNF518AQ6AHZ1 1483 aa39.69■■■■□ 3.94
KPNA4-202ENST00000469804 KDM5CP41229 1560 aa39.69■■■■□ 3.94
KPNA4-202ENST00000469804 ZNF644Q9H582 1327 aaPredicted RBP39.68■■■■□ 3.94
KPNA4-202ENST00000469804 ARHGEF40Q8TER5 1519 aa39.67■■■■□ 3.94
KPNA4-202ENST00000469804 MYOM3Q5VTT5 1437 aa39.65■■■■□ 3.94
KPNA4-202ENST00000469804 AFAP1Q8N556 730 aa39.65■■■■□ 3.94
KPNA4-202ENST00000469804 CAMSAP2Q08AD1 1489 aa39.64■■■■□ 3.94
KPNA4-202ENST00000469804 PLEKHH2Q8IVE3 1493 aa39.64■■■■□ 3.94
KPNA4-202ENST00000469804 ZFYVE16Q7Z3T8 1539 aa39.63■■■■□ 3.93
KPNA4-202ENST00000469804 HNRNPMP52272 730 aaKnown RBP eCLIP39.62■■■■□ 3.932e-6■■■■□ 25
KPNA4-202ENST00000469804 YEATS2Q9ULM3 1422 aa39.62■■■■□ 3.93
KPNA4-202ENST00000469804 HECW2Q9P2P5 1572 aa39.62■■■■□ 3.93
KPNA4-202ENST00000469804 KIAA1107Q9UPP5 1409 aa39.6■■■■□ 3.93
KPNA4-202ENST00000469804 MAGI2Q86UL8 1455 aa39.56■■■■□ 3.92
KPNA4-202ENST00000469804 PPARGC1BQ86YN6 1023 aaKnown RBP39.55■■■■□ 3.92
KPNA4-202ENST00000469804 MBD5Q9P267 1494 aa39.53■■■■□ 3.92
KPNA4-202ENST00000469804 KIDINS220Q9ULH0 1771 aa39.53■■■■□ 3.92
KPNA4-202ENST00000469804 MIA2Q96PC5 1412 aa39.52■■■■□ 3.92
KPNA4-202ENST00000469804 SIGLEC1Q9BZZ2 1709 aa39.51■■■■□ 3.91
KPNA4-202ENST00000469804 ABCA6Q8N139 1617 aa39.51■■■■□ 3.91
KPNA4-202ENST00000469804 PTPN23Q9H3S7 1636 aa39.49■■■■□ 3.91
KPNA4-202ENST00000469804 MLH3Q9UHC1 1453 aa39.49■■■■□ 3.91
KPNA4-202ENST00000469804 DIP2CQ9Y2E4 1556 aa39.48■■■■□ 3.91
KPNA4-202ENST00000469804 MYT1LQ9UL68 1186 aa39.46■■■■□ 3.91
KPNA4-202ENST00000469804 INO80Q9ULG1 1556 aaPredicted RBP39.46■■■■□ 3.91
KPNA4-202ENST00000469804 FGD6Q6ZV73 1430 aa39.45■■■■□ 3.91
KPNA4-202ENST00000469804 ARHGEF5Q12774 1597 aa39.43■■■■□ 3.9
KPNA4-202ENST00000469804 ATP7AQ04656 1500 aa39.42■■■■□ 3.9
KPNA4-202ENST00000469804 CCDC141Q6ZP82 1450 aa39.42■■■■□ 3.9
KPNA4-202ENST00000469804 SPAG9O60271 1321 aaKnown RBP39.4■■■■□ 3.9
KPNA4-202ENST00000469804 ATP10AO60312 1499 aa39.39■■■■□ 3.9
KPNA4-202ENST00000469804 C9orf84Q5VXU9 1444 aa39.36■■■■□ 3.89
KPNA4-202ENST00000469804 TCOF1Q13428 1488 aaKnown RBP39.36■■■■□ 3.89
KPNA4-202ENST00000469804 KDM4FA0A1W2PPD8 638 aa39.32■■■■□ 3.89
KPNA4-202ENST00000469804 BCORL1Q5H9F3 1711 aa39.31■■■■□ 3.88
KPNA4-202ENST00000469804 ARID4BQ4LE39 1312 aaPredicted RBP39.31■■■■□ 3.88
KPNA4-202ENST00000469804 CROCC2H7BZ55 1655 aa39.3■■■■□ 3.88
KPNA4-202ENST00000469804 REREQ9P2R6 1566 aa39.29■■■■□ 3.88
KPNA4-202ENST00000469804 ADGBQ8N7X0 1667 aa39.27■■■■□ 3.88
KPNA4-202ENST00000469804 DNMT1P26358 1616 aaKnown RBP39.26■■■■□ 3.88
KPNA4-202ENST00000469804 RSPH4AQ5TD94 716 aa39.24■■■■□ 3.87
KPNA4-202ENST00000469804 ADAMTSL3P82987 1691 aa39.23■■■■□ 3.87
KPNA4-202ENST00000469804 MAST1Q9Y2H9 1570 aa39.23■■■■□ 3.87
KPNA4-202ENST00000469804 RTEL1-TNFRSF6BF6WH68 1400 aa39.23■■■■□ 3.87
KPNA4-202ENST00000469804 ABCC5O15440 1437 aa39.18■■■■□ 3.86
KPNA4-202ENST00000469804 PLXNC1O60486 1568 aa39.17■■■■□ 3.86
KPNA4-202ENST00000469804 DAPK1P53355 1430 aa39.17■■■■□ 3.86
KPNA4-202ENST00000469804 FAM50AQ14320 339 aaKnown RBP39.17■■■■□ 3.86
KPNA4-202ENST00000469804 MADDQ8WXG6 1647 aa39.17■■■■□ 3.86
KPNA4-202ENST00000469804 TSPY4P0CV99 314 aa39.15■■■■□ 3.86
KPNA4-202ENST00000469804 TSPY10P0CW01 314 aa39.15■■■■□ 3.86
KPNA4-202ENST00000469804 A2MP01023 1474 aa39.15■■■■□ 3.86
KPNA4-202ENST00000469804 MLECQ14165 292 aa39.13■■■■□ 3.85
KPNA4-202ENST00000469804 AGLP35573 1532 aa39.13■■■■□ 3.85
KPNA4-202ENST00000469804 SHANK2Q9UPX8 1470 aa39.11■■■■□ 3.85
KPNA4-202ENST00000469804 FER1L4A9Z1Z3 1794 aa39.1■■■■□ 3.85
KPNA4-202ENST00000469804 RIMS1Q86UR5 1692 aaKnown RBP39.09■■■■□ 3.85
KPNA4-202ENST00000469804 AEBP2Q6ZN18 517 aaPredicted RBP39.01■■■■□ 3.84
KPNA4-202ENST00000469804 RRBP1Q9P2E9 1410 aaKnown RBP38.99■■■■□ 3.83
KPNA4-202ENST00000469804 DHX29Q7Z478 1369 aaKnown RBP38.99■■■■□ 3.83
KPNA4-202ENST00000469804 CHIC2Q9UKJ5 165 aa38.98■■■■□ 3.83
KPNA4-202ENST00000469804 PTPRKQ15262 1439 aa38.94■■■■□ 3.82
KPNA4-202ENST00000469804 PTPRMP28827 1452 aa38.92■■■■□ 3.82
KPNA4-202ENST00000469804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.91■■■■□ 3.82
KPNA4-202ENST00000469804 KIF15Q9NS87 1388 aa38.91■■■■□ 3.82
KPNA4-202ENST00000469804 DUOX2Q9NRD8 1548 aa38.9■■■■□ 3.82
KPNA4-202ENST00000469804 ADGRL2O95490 1459 aa38.9■■■■□ 3.82
KPNA4-202ENST00000469804 RRP7BPQ9NSQ0 103 aa38.88■■■■□ 3.81
KPNA4-202ENST00000469804 ITGAEP38570 1179 aa38.87■■■■□ 3.81
KPNA4-202ENST00000469804 EIF2AK4Q9P2K8 1649 aaKnown RBP38.87■■■■□ 3.81
KPNA4-202ENST00000469804 ANKRD30AQ9BXX3 1397 aa38.86■■■■□ 3.81
KPNA4-202ENST00000469804 NCOA1Q15788 1441 aa38.85■■■■□ 3.81
KPNA4-202ENST00000469804 KIF3BO15066 747 aa38.84■■■■□ 3.81
KPNA4-202ENST00000469804 CLTCQ00610 1675 aaKnown RBP38.84■■■■□ 3.81
KPNA4-202ENST00000469804 GGT6Q6P531 493 aa38.83■■■■□ 3.81
KPNA4-202ENST00000469804 RNF17Q9BXT8 1623 aaKnown RBP38.81■■■■□ 3.8
KPNA4-202ENST00000469804 PLPPR3Q6T4P5 718 aa38.79■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms