RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 DIP2BQ9P265 1576 aa15.96■□□□□ 0.14
THBS3-206ENST00000469769 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
THBS3-206ENST00000469769 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
THBS3-206ENST00000469769 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
THBS3-206ENST00000469769 PTPN23Q9H3S7 1636 aa15.91■□□□□ 0.14
THBS3-206ENST00000469769 CFDP1Q9UEE9 299 aaPredicted RBP15.91■□□□□ 0.14
THBS3-206ENST00000469769 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
THBS3-206ENST00000469769 CD109Q6YHK3 1445 aa15.9■□□□□ 0.14
THBS3-206ENST00000469769 KIAA1107Q9UPP5 1409 aa15.87■□□□□ 0.13
THBS3-206ENST00000469769 FAM69CQ0P6D2 419 aa15.87■□□□□ 0.13
THBS3-206ENST00000469769 ARHGAP5Q13017 1502 aa15.86■□□□□ 0.13
THBS3-206ENST00000469769 EFCAB2Q5VUJ9 269 aa15.86■□□□□ 0.13
THBS3-206ENST00000469769 SAMD9LQ8IVG5 1584 aa15.86■□□□□ 0.13
THBS3-206ENST00000469769 CAMSAP2Q08AD1 1489 aa15.85■□□□□ 0.13
THBS3-206ENST00000469769 ZNF644Q9H582 1327 aaPredicted RBP15.85■□□□□ 0.13
THBS3-206ENST00000469769 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
THBS3-206ENST00000469769 MBD5Q9P267 1494 aa15.84■□□□□ 0.13
THBS3-206ENST00000469769 FANCAO15360 1455 aa15.84■□□□□ 0.13
THBS3-206ENST00000469769 NEO1Q92859 1461 aa15.84■□□□□ 0.13
THBS3-206ENST00000469769 PPRC1Q5VV67 1664 aaKnown RBP15.83■□□□□ 0.13
THBS3-206ENST00000469769 ARHGEF5Q12774 1597 aa15.83■□□□□ 0.12
THBS3-206ENST00000469769 ABCC1P33527 1531 aa15.82■□□□□ 0.12
THBS3-206ENST00000469769 CFAP74Q9C0B2 1584 aa15.82■□□□□ 0.12
THBS3-206ENST00000469769 DNMT1P26358 1616 aaKnown RBP15.81■□□□□ 0.12
THBS3-206ENST00000469769 RSPH4AQ5TD94 716 aa15.81■□□□□ 0.12
THBS3-206ENST00000469769 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
THBS3-206ENST00000469769 ARHGEF12Q9NZN5 1544 aa15.79■□□□□ 0.12
THBS3-206ENST00000469769 ABCC5O15440 1437 aa15.79■□□□□ 0.12
THBS3-206ENST00000469769 AKNAQ7Z591 1439 aa15.79■□□□□ 0.12
THBS3-206ENST00000469769 PTPRKQ15262 1439 aa15.78■□□□□ 0.12
THBS3-206ENST00000469769 TEX14Q8IWB6 1497 aa15.78■□□□□ 0.12
THBS3-206ENST00000469769 DAPK1P53355 1430 aa15.77■□□□□ 0.12
THBS3-206ENST00000469769 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
THBS3-206ENST00000469769 SYCP2Q9BX26 1530 aa15.77■□□□□ 0.11
THBS3-206ENST00000469769 SHANK2Q9UPX8 1470 aa15.76■□□□□ 0.11
THBS3-206ENST00000469769 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
THBS3-206ENST00000469769 ADGRL1O94910 1474 aa15.75■□□□□ 0.11
THBS3-206ENST00000469769 CCDC141Q6ZP82 1450 aa15.75■□□□□ 0.11
THBS3-206ENST00000469769 CROCC2H7BZ55 1655 aa15.75■□□□□ 0.11
THBS3-206ENST00000469769 TSPOAP1O95153 1857 aa15.74■□□□□ 0.11
THBS3-206ENST00000469769 HNRNPMP52272 730 aaKnown RBP eCLIP15.74■□□□□ 0.11
THBS3-206ENST00000469769 SCAPERQ9BY12 1400 aa15.74■□□□□ 0.11
THBS3-206ENST00000469769 MAST1Q9Y2H9 1570 aa15.74■□□□□ 0.11
THBS3-206ENST00000469769 ROCK1Q13464 1354 aa15.74■□□□□ 0.11
THBS3-206ENST00000469769 ADGRL2O95490 1459 aa15.73■□□□□ 0.11
THBS3-206ENST00000469769 TRAPPC8Q9Y2L5 1435 aa15.73■□□□□ 0.11
THBS3-206ENST00000469769 KDM5CP41229 1560 aa15.7■□□□□ 0.1
THBS3-206ENST00000469769 RTEL1-TNFRSF6BF6WH68 1400 aa15.7■□□□□ 0.1
THBS3-206ENST00000469769 POGZQ7Z3K3 1410 aa15.7■□□□□ 0.1
THBS3-206ENST00000469769 ZNF518AQ6AHZ1 1483 aa15.7■□□□□ 0.1
THBS3-206ENST00000469769 NCOA1Q15788 1441 aa15.69■□□□□ 0.1
THBS3-206ENST00000469769 DENND4BO75064 1496 aaPredicted RBP15.69■□□□□ 0.1
THBS3-206ENST00000469769 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
THBS3-206ENST00000469769 RICTORQ6R327 1708 aa15.68■□□□□ 0.1
THBS3-206ENST00000469769 TSPY4P0CV99 314 aa15.68■□□□□ 0.1
THBS3-206ENST00000469769 TSPY10P0CW01 314 aa15.68■□□□□ 0.1
THBS3-206ENST00000469769 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
THBS3-206ENST00000469769 MLH3Q9UHC1 1453 aa15.67■□□□□ 0.1
THBS3-206ENST00000469769 AFAP1Q8N556 730 aa15.67■□□□□ 0.1
THBS3-206ENST00000469769 ADGBQ8N7X0 1667 aa15.67■□□□□ 0.1
THBS3-206ENST00000469769 ITGAEP38570 1179 aa15.66■□□□□ 0.1
THBS3-206ENST00000469769 NAIPQ13075 1403 aa15.66■□□□□ 0.1
THBS3-206ENST00000469769 FRMPD1Q5SYB0 1578 aa15.66■□□□□ 0.1
THBS3-206ENST00000469769 INO80Q9ULG1 1556 aaPredicted RBP15.66■□□□□ 0.1
THBS3-206ENST00000469769 COL17A1Q9UMD9 1497 aaPredicted RBP15.65■□□□□ 0.1
THBS3-206ENST00000469769 HRCP23327 699 aa15.65■□□□□ 0.1
THBS3-206ENST00000469769 PLXNC1O60486 1568 aa15.65■□□□□ 0.1
THBS3-206ENST00000469769 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
THBS3-206ENST00000469769 ZMYM4Q5VZL5 1548 aa15.64■□□□□ 0.09
THBS3-206ENST00000469769 ZFYVE16Q7Z3T8 1539 aa15.64■□□□□ 0.09
THBS3-206ENST00000469769 KIDINS220Q9ULH0 1771 aa15.63■□□□□ 0.09
THBS3-206ENST00000469769 GCC2Q8IWJ2 1684 aa15.63■□□□□ 0.09
THBS3-206ENST00000469769 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
THBS3-206ENST00000469769 SETD5Q9C0A6 1442 aa15.62■□□□□ 0.09
THBS3-206ENST00000469769 ATP7AQ04656 1500 aa15.62■□□□□ 0.09
THBS3-206ENST00000469769 MAGI2Q86UL8 1455 aa15.61■□□□□ 0.09
THBS3-206ENST00000469769 RAPGEF3O95398 923 aa15.61■□□□□ 0.09
THBS3-206ENST00000469769 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
THBS3-206ENST00000469769 HECW2Q9P2P5 1572 aa15.61■□□□□ 0.09
THBS3-206ENST00000469769 RRP7BPQ9NSQ0 103 aa15.58■□□□□ 0.08
THBS3-206ENST00000469769 KIF15Q9NS87 1388 aa15.58■□□□□ 0.08
THBS3-206ENST00000469769 DUOX2Q9NRD8 1548 aa15.58■□□□□ 0.08
THBS3-206ENST00000469769 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
THBS3-206ENST00000469769 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
THBS3-206ENST00000469769 ANKRD50Q9ULJ7 1429 aa15.55■□□□□ 0.08
THBS3-206ENST00000469769 KDM4FA0A1W2PPD8 638 aa15.55■□□□□ 0.08
THBS3-206ENST00000469769 ERBINQ96RT1 1412 aa15.54■□□□□ 0.08
THBS3-206ENST00000469769 DHX29Q7Z478 1369 aaKnown RBP15.54■□□□□ 0.08
THBS3-206ENST00000469769 KDM6BO15054 1643 aa15.54■□□□□ 0.08
THBS3-206ENST00000469769 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
THBS3-206ENST00000469769 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
THBS3-206ENST00000469769 DIP2CQ9Y2E4 1556 aa15.53■□□□□ 0.08
THBS3-206ENST00000469769 YEATS2Q9ULM3 1422 aa15.51■□□□□ 0.07
THBS3-206ENST00000469769 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
THBS3-206ENST00000469769 A2MP01023 1474 aa15.51■□□□□ 0.07
THBS3-206ENST00000469769 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
THBS3-206ENST00000469769 ATP10AO60312 1499 aa15.5■□□□□ 0.07
THBS3-206ENST00000469769 LMTK3Q96Q04 1460 aa15.5■□□□□ 0.07
THBS3-206ENST00000469769 ARHGEF40Q8TER5 1519 aa15.49■□□□□ 0.07
THBS3-206ENST00000469769 AGLP35573 1532 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms