RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 EMP3P54852 163 aa9.81□□□□□ -0.84
FAM49A-205ENST00000469507 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
FAM49A-205ENST00000469507 DPY19L2Q6NUT2 758 aa9.8□□□□□ -0.84
FAM49A-205ENST00000469507 ILDR1Q86SU0 546 aaPredicted RBP9.8□□□□□ -0.84
FAM49A-205ENST00000469507 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
FAM49A-205ENST00000469507 TMEM132AQ24JP5 1023 aa9.77□□□□□ -0.85
FAM49A-205ENST00000469507 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
FAM49A-205ENST00000469507 HS3ST6Q96QI5 342 aa9.76□□□□□ -0.85
FAM49A-205ENST00000469507 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
FAM49A-205ENST00000469507 KRTAP3-2Q9BYR7 98 aa9.76□□□□□ -0.85
FAM49A-205ENST00000469507 CABP2Q9NPB3 220 aa9.74□□□□□ -0.85
FAM49A-205ENST00000469507 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
FAM49A-205ENST00000469507 HOXB3P14651 431 aaPredicted RBP9.71□□□□□ -0.86
FAM49A-205ENST00000469507 GTPBP6O43824 516 aaPredicted RBP9.7□□□□□ -0.86
FAM49A-205ENST00000469507 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
FAM49A-205ENST00000469507 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
FAM49A-205ENST00000469507 RNF25Q96BH1 459 aaPredicted RBP9.68□□□□□ -0.86
FAM49A-205ENST00000469507 G3V3G9 751 aa9.66□□□□□ -0.86
FAM49A-205ENST00000469507 RIOK3O14730 519 aaKnown RBP9.62□□□□□ -0.87
FAM49A-205ENST00000469507 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
FAM49A-205ENST00000469507 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
FAM49A-205ENST00000469507 HOMEZQ8IX15 550 aa9.6□□□□□ -0.87
FAM49A-205ENST00000469507 EFCAB3Q8N7B9 438 aa9.6□□□□□ -0.87
FAM49A-205ENST00000469507 DOK7Q18PE1 504 aa9.59□□□□□ -0.87
FAM49A-205ENST00000469507 C14orf37Q86TY3 774 aa9.59□□□□□ -0.87
FAM49A-205ENST00000469507 ERBB3P21860 1342 aa9.57□□□□□ -0.88
FAM49A-205ENST00000469507 RYDENQ9NUL5 291 aaKnown RBP9.57□□□□□ -0.88
FAM49A-205ENST00000469507 STK25O00506 426 aa9.56□□□□□ -0.88
FAM49A-205ENST00000469507 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
FAM49A-205ENST00000469507 TMEM92Q6UXU6 159 aa9.56□□□□□ -0.88
FAM49A-205ENST00000469507 P3H3Q8IVL6 736 aa9.55□□□□□ -0.88
FAM49A-205ENST00000469507 MICALL2Q8IY33 904 aa9.54□□□□□ -0.88
FAM49A-205ENST00000469507 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.89
FAM49A-205ENST00000469507 RIMBP2O15034 1052 aa9.51□□□□□ -0.89
FAM49A-205ENST00000469507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
FAM49A-205ENST00000469507 MS4A4AQ96JQ5 239 aa9.5□□□□□ -0.89
FAM49A-205ENST00000469507 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
FAM49A-205ENST00000469507 GPR153Q6NV75 609 aa9.47□□□□□ -0.89
FAM49A-205ENST00000469507 LMOD2Q6P5Q4 547 aa9.47□□□□□ -0.89
FAM49A-205ENST00000469507 SOX12O15370 315 aa9.46□□□□□ -0.9
FAM49A-205ENST00000469507 ZSWIM6Q9HCJ5 1215 aa9.46□□□□□ -0.9
FAM49A-205ENST00000469507 PHF8Q9UPP1 1060 aa9.46□□□□□ -0.9
FAM49A-205ENST00000469507 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
FAM49A-205ENST00000469507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.45□□□□□ -0.9
FAM49A-205ENST00000469507 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
FAM49A-205ENST00000469507 ZFP91Q96JP5 570 aaPredicted RBP9.45□□□□□ -0.9
FAM49A-205ENST00000469507 BCL11BQ9C0K0 894 aaPredicted RBP9.45□□□□□ -0.9
FAM49A-205ENST00000469507 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
FAM49A-205ENST00000469507 MYT1LQ9UL68 1186 aa9.43□□□□□ -0.9
FAM49A-205ENST00000469507 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
FAM49A-205ENST00000469507 ARSIQ5FYB1 569 aa9.41□□□□□ -0.9
FAM49A-205ENST00000469507 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
FAM49A-205ENST00000469507 KHSRPQ92945 711 aaKnown RBP eCLIP9.39□□□□□ -0.91
FAM49A-205ENST00000469507 ZNF316A6NFI3 1004 aaPredicted RBP9.34□□□□□ -0.91
FAM49A-205ENST00000469507 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
FAM49A-205ENST00000469507 FBXO22Q8NEZ5 403 aa9.34□□□□□ -0.91
FAM49A-205ENST00000469507 NLRP6P59044 892 aa9.33□□□□□ -0.92
FAM49A-205ENST00000469507 CADPS2Q86UW7 1296 aa9.33□□□□□ -0.92
FAM49A-205ENST00000469507 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
FAM49A-205ENST00000469507 PTGER2P43116 358 aa9.31□□□□□ -0.92
FAM49A-205ENST00000469507 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
FAM49A-205ENST00000469507 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
FAM49A-205ENST00000469507 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
FAM49A-205ENST00000469507 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
FAM49A-205ENST00000469507 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
FAM49A-205ENST00000469507 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
FAM49A-205ENST00000469507 KIF3CO14782 793 aa9.27□□□□□ -0.93
FAM49A-205ENST00000469507 NUDT7P0C024 238 aa9.26□□□□□ -0.93
FAM49A-205ENST00000469507 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
FAM49A-205ENST00000469507 POTEEQ6S8J3 1075 aa9.24□□□□□ -0.93
FAM49A-205ENST00000469507 TESPA1A2RU30 521 aaPredicted RBP9.22□□□□□ -0.93
FAM49A-205ENST00000469507 E2F4Q16254 413 aa9.22□□□□□ -0.93
FAM49A-205ENST00000469507 LHX6Q9UPM6 363 aa9.22□□□□□ -0.93
FAM49A-205ENST00000469507 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
FAM49A-205ENST00000469507 PBX2P40425 430 aa9.2□□□□□ -0.94
FAM49A-205ENST00000469507 PCDHGA4Q9Y5G9 962 aa9.2□□□□□ -0.94
FAM49A-205ENST00000469507 SEMA3EO15041 775 aa9.19□□□□□ -0.94
FAM49A-205ENST00000469507 ZMYND10O75800 440 aa9.19□□□□□ -0.94
FAM49A-205ENST00000469507 SLC34A2O95436 690 aa9.18□□□□□ -0.94
FAM49A-205ENST00000469507 SMYD5Q6GMV2 418 aa9.17□□□□□ -0.94
FAM49A-205ENST00000469507 TMC2Q8TDI7 906 aa9.14□□□□□ -0.95
FAM49A-205ENST00000469507 BARGINQ6ZT62 677 aa9.13□□□□□ -0.95
FAM49A-205ENST00000469507 PODXL2Q9NZ53 605 aa9.13□□□□□ -0.95
FAM49A-205ENST00000469507 PPP1R37O75864 691 aa9.12□□□□□ -0.95
FAM49A-205ENST00000469507 ZMYND15Q9H091 742 aa9.12□□□□□ -0.95
FAM49A-205ENST00000469507 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
FAM49A-205ENST00000469507 ADGRD1Q6QNK2 874 aa9.11□□□□□ -0.95
FAM49A-205ENST00000469507 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
FAM49A-205ENST00000469507 HCSTQ9UBK5 93 aa9.1□□□□□ -0.95
FAM49A-205ENST00000469507 KDM4FA0A1W2PPD8 638 aa9.09□□□□□ -0.95
FAM49A-205ENST00000469507 AK7Q96M32 723 aa9.08□□□□□ -0.96
FAM49A-205ENST00000469507 UBTFP17480 764 aaKnown RBP9.07□□□□□ -0.96
FAM49A-205ENST00000469507 DMRTA1Q5VZB9 504 aa9.07□□□□□ -0.96
FAM49A-205ENST00000469507 ARIH1Q9Y4X5 557 aaPredicted RBP9.07□□□□□ -0.96
FAM49A-205ENST00000469507 PSEN2P49810 448 aa9.06□□□□□ -0.96
FAM49A-205ENST00000469507 PSDA5PKW4 1024 aaPredicted RBP9.05□□□□□ -0.96
FAM49A-205ENST00000469507 PTCD2Q8WV60 388 aaKnown RBP9.05□□□□□ -0.96
FAM49A-205ENST00000469507 RSPH6AQ9H0K4 717 aa9.05□□□□□ -0.96
FAM49A-205ENST00000469507 HRO43593 1189 aa9.04□□□□□ -0.96
FAM49A-205ENST00000469507 PDE4AP27815 886 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms