RNA–Protein interactions for RNA: ENST00000469241.2

PKD1-205, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 659 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-205ENST00000469241 EFCAB2Q5VUJ9 269 aa33.71■■■□□ 2.99
PKD1-205ENST00000469241 MADDQ8WXG6 1647 aa33.69■■■□□ 2.98
PKD1-205ENST00000469241 MAGI2Q86UL8 1455 aa33.69■■■□□ 2.98
PKD1-205ENST00000469241 POGZQ7Z3K3 1410 aa33.68■■■□□ 2.98
PKD1-205ENST00000469241 PCF11O94913 1555 aaKnown RBP33.68■■■□□ 2.98
PKD1-205ENST00000469241 CASKIN1Q8WXD9 1431 aa33.66■■■□□ 2.98
PKD1-205ENST00000469241 YEATS2Q9ULM3 1422 aa33.65■■■□□ 2.98
PKD1-205ENST00000469241 CCDC18Q5T9S5 1454 aa33.64■■■□□ 2.98
PKD1-205ENST00000469241 ARHGAP5Q13017 1502 aa33.63■■■□□ 2.97
PKD1-205ENST00000469241 RIMS1Q86UR5 1692 aaKnown RBP33.58■■■□□ 2.97
PKD1-205ENST00000469241 FYCO1Q9BQS8 1478 aa33.55■■■□□ 2.96
PKD1-205ENST00000469241 ZNF518AQ6AHZ1 1483 aa33.53■■■□□ 2.96
PKD1-205ENST00000469241 SIGLEC1Q9BZZ2 1709 aa33.53■■■□□ 2.96
PKD1-205ENST00000469241 MLECQ14165 292 aa33.5■■■□□ 2.95
PKD1-205ENST00000469241 CDC42BPBQ9Y5S2 1711 aa33.5■■■□□ 2.95
PKD1-205ENST00000469241 ATP10AO60312 1499 aa33.5■■■□□ 2.95
PKD1-205ENST00000469241 PREX2Q70Z35 1606 aa33.49■■■□□ 2.95
PKD1-205ENST00000469241 C9orf84Q5VXU9 1444 aa33.48■■■□□ 2.95
PKD1-205ENST00000469241 MYT1LQ9UL68 1186 aa33.47■■■□□ 2.95
PKD1-205ENST00000469241 PLPPR3Q6T4P5 718 aa33.45■■■□□ 2.95
PKD1-205ENST00000469241 KDM5CP41229 1560 aa33.44■■■□□ 2.94
PKD1-205ENST00000469241 ILDR1Q86SU0 546 aaPredicted RBP33.44■■■□□ 2.94
PKD1-205ENST00000469241 AFAP1Q8N556 730 aa33.44■■■□□ 2.94
PKD1-205ENST00000469241 FER1L4A9Z1Z3 1794 aa33.43■■■□□ 2.94
PKD1-205ENST00000469241 ABCC1P33527 1531 aa33.38■■■□□ 2.93
PKD1-205ENST00000469241 LMTK3Q96Q04 1460 aa33.37■■■□□ 2.93
PKD1-205ENST00000469241 CDC42BPAQ5VT25 1732 aa33.37■■■□□ 2.93
PKD1-205ENST00000469241 ITSN2Q9NZM3 1697 aa33.35■■■□□ 2.93
PKD1-205ENST00000469241 ARHGEF12Q9NZN5 1544 aa33.33■■■□□ 2.93
PKD1-205ENST00000469241 DIP2CQ9Y2E4 1556 aa33.33■■■□□ 2.93
PKD1-205ENST00000469241 MLH3Q9UHC1 1453 aa33.31■■■□□ 2.92
PKD1-205ENST00000469241 TRAPPC8Q9Y2L5 1435 aa33.31■■■□□ 2.92
PKD1-205ENST00000469241 ZNF777Q9ULD5 760 aaPredicted RBP33.29■■■□□ 2.92
PKD1-205ENST00000469241 ABCA6Q8N139 1617 aa33.28■■■□□ 2.92
PKD1-205ENST00000469241 REREQ9P2R6 1566 aa33.27■■■□□ 2.92
PKD1-205ENST00000469241 MTUS2Q5JR59 1369 aa33.24■■■□□ 2.91
PKD1-205ENST00000469241 GPATCH8Q9UKJ3 1502 aaKnown RBP33.24■■■□□ 2.91
PKD1-205ENST00000469241 SAMD9LQ8IVG5 1584 aa33.22■■■□□ 2.91
PKD1-205ENST00000469241 HSPA2P54652 639 aa33.21■■■□□ 2.91
PKD1-205ENST00000469241 CEP162Q5TB80 1403 aa33.2■■■□□ 2.91
PKD1-205ENST00000469241 CCNB3Q8WWL7 1395 aa33.2■■■□□ 2.9
PKD1-205ENST00000469241 SYCP2Q9BX26 1530 aa33.19■■■□□ 2.9
PKD1-205ENST00000469241 CFDP1Q9UEE9 299 aaPredicted RBP33.18■■■□□ 2.9
PKD1-205ENST00000469241 KIDINS220Q9ULH0 1771 aa33.18■■■□□ 2.9
PKD1-205ENST00000469241 AGLP35573 1532 aa33.16■■■□□ 2.9
PKD1-205ENST00000469241 CEBPAP49715 358 aaPredicted RBP33.15■■■□□ 2.9
PKD1-205ENST00000469241 PLEKHH2Q8IVE3 1493 aa33.14■■■□□ 2.9
PKD1-205ENST00000469241 ESF1Q9H501 851 aaKnown RBP33.14■■■□□ 2.9
PKD1-205ENST00000469241 PREX1Q8TCU6 1659 aa33.13■■■□□ 2.89
PKD1-205ENST00000469241 HNRNPMP52272 730 aaKnown RBP eCLIP33.12■■■□□ 2.89
PKD1-205ENST00000469241 EHBP1L1Q8N3D4 1523 aa33.12■■■□□ 2.89
PKD1-205ENST00000469241 SPAG9O60271 1321 aaKnown RBP33.11■■■□□ 2.89
PKD1-205ENST00000469241 KIAA1107Q9UPP5 1409 aa33.1■■■□□ 2.89
PKD1-205ENST00000469241 TIAM1Q13009 1591 aa33.04■■■□□ 2.88
PKD1-205ENST00000469241 ATP7AQ04656 1500 aa33.04■■■□□ 2.88
PKD1-205ENST00000469241 FBXO41Q8TF61 875 aa33.03■■■□□ 2.88
PKD1-205ENST00000469241 UHRF1BP1Q6BDS2 1440 aa33.02■■■□□ 2.88
PKD1-205ENST00000469241 C3P01024 1663 aa33.02■■■□□ 2.88
PKD1-205ENST00000469241 INO80Q9ULG1 1556 aaPredicted RBP33■■■□□ 2.87
PKD1-205ENST00000469241 CNTLNQ9NXG0 1405 aa32.99■■■□□ 2.87
PKD1-205ENST00000469241 SUPT6HQ7KZ85 1726 aaKnown RBP32.99■■■□□ 2.87
PKD1-205ENST00000469241 SETD1BQ9UPS6 1966 aaKnown RBP32.98■■■□□ 2.87
PKD1-205ENST00000469241 ZNF644Q9H582 1327 aaPredicted RBP32.94■■■□□ 2.86
PKD1-205ENST00000469241 A2MP01023 1474 aa32.93■■■□□ 2.86
PKD1-205ENST00000469241 PLXNC1O60486 1568 aa32.9■■■□□ 2.86
PKD1-205ENST00000469241 NCOA2Q15596 1464 aa32.89■■■□□ 2.86
PKD1-205ENST00000469241 LOC105371045A0A1W2PR82 267 aa32.89■■■□□ 2.86
PKD1-205ENST00000469241 MROH2AA6NES4 1674 aa32.88■■■□□ 2.85
PKD1-205ENST00000469241 ADGBQ8N7X0 1667 aa32.88■■■□□ 2.85
PKD1-205ENST00000469241 MBD5Q9P267 1494 aa32.87■■■□□ 2.85
PKD1-205ENST00000469241 VPS8Q8N3P4 1428 aa32.85■■■□□ 2.85
PKD1-205ENST00000469241 DMRT2Q9Y5R5 561 aa32.85■■■□□ 2.85
PKD1-205ENST00000469241 GGT6Q6P531 493 aa32.82■■■□□ 2.84
PKD1-205ENST00000469241 ZMYM3Q14202 1370 aa32.82■■■□□ 2.84
PKD1-205ENST00000469241 CLTCQ00610 1675 aaKnown RBP32.82■■■□□ 2.84
PKD1-205ENST00000469241 STRCQ7RTU9 1775 aa32.81■■■□□ 2.84
PKD1-205ENST00000469241 RTEL1-TNFRSF6BF6WH68 1400 aa32.81■■■□□ 2.84
PKD1-205ENST00000469241 CAMSAP2Q08AD1 1489 aa32.8■■■□□ 2.84
PKD1-205ENST00000469241 NPATQ14207 1427 aa32.79■■■□□ 2.84
PKD1-205ENST00000469241 CCDC141Q6ZP82 1450 aa32.79■■■□□ 2.84
PKD1-205ENST00000469241 CERKQ8TCT0 537 aa32.77■■■□□ 2.84
PKD1-205ENST00000469241 LRRC9Q6ZRR7 1453 aa32.74■■■□□ 2.83
PKD1-205ENST00000469241 RSPH4AQ5TD94 716 aa32.74■■■□□ 2.83
PKD1-205ENST00000469241 PPP6R1Q9UPN7 881 aa32.72■■■□□ 2.83
PKD1-205ENST00000469241 DHX29Q7Z478 1369 aaKnown RBP32.71■■■□□ 2.83
PKD1-205ENST00000469241 PTPRTO14522 1441 aa32.68■■■□□ 2.82
PKD1-205ENST00000469241 ARHGEF5Q12774 1597 aa32.67■■■□□ 2.82
PKD1-205ENST00000469241 MAP3K1Q13233 1512 aa32.66■■■□□ 2.82
PKD1-205ENST00000469241 TSPY4P0CV99 314 aa32.65■■■□□ 2.82
PKD1-205ENST00000469241 TSPY10P0CW01 314 aa32.65■■■□□ 2.82
PKD1-205ENST00000469241 NCOA1Q15788 1441 aa32.65■■■□□ 2.82
PKD1-205ENST00000469241 PTPRKQ15262 1439 aa32.64■■■□□ 2.82
PKD1-205ENST00000469241 CAMSAP1Q5T5Y3 1602 aa32.64■■■□□ 2.82
PKD1-205ENST00000469241 MYO3AQ8NEV4 1616 aa32.64■■■□□ 2.82
PKD1-205ENST00000469241 KIF3BO15066 747 aa32.63■■■□□ 2.81
PKD1-205ENST00000469241 ZNF142P52746 1687 aaPredicted RBP32.59■■■□□ 2.81
PKD1-205ENST00000469241 KANK4Q5T7N3 995 aaPredicted RBP32.59■■■□□ 2.81
PKD1-205ENST00000469241 CEP170BQ9Y4F5 1589 aaPredicted RBP32.58■■■□□ 2.81
PKD1-205ENST00000469241 KDM5DQ9BY66 1539 aa32.55■■■□□ 2.8
PKD1-205ENST00000469241 FAM135AQ9P2D6 1515 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 450 ms