RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 ZNF644Q9H582 1327 aaPredicted RBP35.5■■■■□ 3.27
MTA1-209ENST00000469140 CAMSAP2Q08AD1 1489 aa35.5■■■■□ 3.27
MTA1-209ENST00000469140 CDC42BPBQ9Y5S2 1711 aa35.49■■■■□ 3.27
MTA1-209ENST00000469140 ZNF777Q9ULD5 760 aaPredicted RBP35.49■■■■□ 3.27
MTA1-209ENST00000469140 ARHGAP5Q13017 1502 aa35.45■■■■□ 3.27
MTA1-209ENST00000469140 ARAP3Q8WWN8 1544 aa35.45■■■■□ 3.27
MTA1-209ENST00000469140 EFCAB2Q5VUJ9 269 aa35.4■■■■□ 3.26
MTA1-209ENST00000469140 DNAJC5Q9H3Z4 198 aa35.4■■■■□ 3.26
MTA1-209ENST00000469140 PTPRKQ15262 1439 aa35.38■■■■□ 3.25
MTA1-209ENST00000469140 DNMT1P26358 1616 aaKnown RBP35.38■■■■□ 3.25
MTA1-209ENST00000469140 DAPK1P53355 1430 aa35.37■■■■□ 3.25
MTA1-209ENST00000469140 SAMD9LQ8IVG5 1584 aa35.36■■■■□ 3.25
MTA1-209ENST00000469140 ABCC5O15440 1437 aa35.35■■■■□ 3.25
MTA1-209ENST00000469140 PLEKHH2Q8IVE3 1493 aa35.35■■■■□ 3.25
MTA1-209ENST00000469140 CD109Q6YHK3 1445 aa35.31■■■■□ 3.24
MTA1-209ENST00000469140 KIAA1107Q9UPP5 1409 aa35.31■■■■□ 3.24
MTA1-209ENST00000469140 GLI2P10070 1586 aa35.31■■■■□ 3.24
MTA1-209ENST00000469140 RSPH4AQ5TD94 716 aa35.3■■■■□ 3.24
MTA1-209ENST00000469140 ARHGEF5Q12774 1597 aa35.28■■■■□ 3.24
MTA1-209ENST00000469140 MBD5Q9P267 1494 aa35.28■■■■□ 3.24
MTA1-209ENST00000469140 FANCAO15360 1455 aa35.26■■■■□ 3.24
MTA1-209ENST00000469140 HNRNPMP52272 730 aaKnown RBP eCLIP35.26■■■■□ 3.235e-6■■□□□ 11.8
MTA1-209ENST00000469140 SETD5Q9C0A6 1442 aa35.25■■■■□ 3.23
MTA1-209ENST00000469140 AKNAQ7Z591 1439 aa35.23■■■■□ 3.23
MTA1-209ENST00000469140 ROCK1Q13464 1354 aa35.23■■■■□ 3.23
MTA1-209ENST00000469140 CHIC2Q9UKJ5 165 aa35.23■■■■□ 3.23
MTA1-209ENST00000469140 HFM1A2PYH4 1435 aa35.22■■■■□ 3.23
MTA1-209ENST00000469140 DIP2BQ9P265 1576 aa35.22■■■■□ 3.23
MTA1-209ENST00000469140 SYCP2Q9BX26 1530 aa35.22■■■■□ 3.23
MTA1-209ENST00000469140 CCDC141Q6ZP82 1450 aa35.2■■■■□ 3.23
MTA1-209ENST00000469140 SHANK2Q9UPX8 1470 aa35.2■■■■□ 3.23
MTA1-209ENST00000469140 ABCC1P33527 1531 aa35.2■■■■□ 3.23
MTA1-209ENST00000469140 CROCC2H7BZ55 1655 aa35.2■■■■□ 3.23
MTA1-209ENST00000469140 TSPY4P0CV99 314 aa35.19■■■■□ 3.22
MTA1-209ENST00000469140 TSPY10P0CW01 314 aa35.19■■■■□ 3.22
MTA1-209ENST00000469140 FAM69CQ0P6D2 419 aa35.19■■■■□ 3.22
MTA1-209ENST00000469140 MAP3K4Q9Y6R4 1608 aa35.19■■■■□ 3.22
MTA1-209ENST00000469140 HRCP23327 699 aa35.16■■■■□ 3.22
MTA1-209ENST00000469140 RAB3GAP2Q9H2M9 1393 aa35.16■■■■□ 3.22
MTA1-209ENST00000469140 ARHGEF12Q9NZN5 1544 aa35.16■■■■□ 3.22
MTA1-209ENST00000469140 CFAP74Q9C0B2 1584 aa35.15■■■■□ 3.22
MTA1-209ENST00000469140 NAIPQ13075 1403 aa35.15■■■■□ 3.22
MTA1-209ENST00000469140 ADGRL2O95490 1459 aa35.14■■■■□ 3.22
MTA1-209ENST00000469140 C9orf84Q5VXU9 1444 aa35.12■■■■□ 3.21
MTA1-209ENST00000469140 RRP7BPQ9NSQ0 103 aa35.12■■■■□ 3.21
MTA1-209ENST00000469140 ADGRL1O94910 1474 aa35.1■■■■□ 3.21
MTA1-209ENST00000469140 NEO1Q92859 1461 aa35.1■■■■□ 3.21
MTA1-209ENST00000469140 NCOA1Q15788 1441 aa35.1■■■■□ 3.21
MTA1-209ENST00000469140 ADGBQ8N7X0 1667 aa35.1■■■■□ 3.21
MTA1-209ENST00000469140 ANKRD30AQ9BXX3 1397 aa35.09■■■■□ 3.21
MTA1-209ENST00000469140 GCC2Q8IWJ2 1684 aa35.07■■■■□ 3.2
MTA1-209ENST00000469140 SCAPERQ9BY12 1400 aa35.06■■■■□ 3.2
MTA1-209ENST00000469140 MAST1Q9Y2H9 1570 aa35.06■■■■□ 3.2
MTA1-209ENST00000469140 TRAPPC8Q9Y2L5 1435 aa35.05■■■■□ 3.2
MTA1-209ENST00000469140 CCER1Q8TC90 406 aaPredicted RBP35.02■■■■□ 3.2
MTA1-209ENST00000469140 KIF13AQ9H1H9 1805 aa34.99■■■■□ 3.19
MTA1-209ENST00000469140 AFAP1Q8N556 730 aa34.97■■■■□ 3.19
MTA1-209ENST00000469140 ACIN1Q9UKV3 1341 aaKnown RBP34.96■■■■□ 3.19
MTA1-209ENST00000469140 TEX14Q8IWB6 1497 aa34.96■■■■□ 3.19
MTA1-209ENST00000469140 RTEL1-TNFRSF6BF6WH68 1400 aa34.95■■■■□ 3.18
MTA1-209ENST00000469140 SPAG9O60271 1321 aaKnown RBP34.94■■■■□ 3.18
MTA1-209ENST00000469140 ZNF518AQ6AHZ1 1483 aa34.93■■■■□ 3.18
MTA1-209ENST00000469140 KIF15Q9NS87 1388 aa34.92■■■■□ 3.18
MTA1-209ENST00000469140 PLXNC1O60486 1568 aa34.9■■■■□ 3.18
MTA1-209ENST00000469140 PPRC1Q5VV67 1664 aaKnown RBP34.9■■■■□ 3.18
MTA1-209ENST00000469140 POGZQ7Z3K3 1410 aa34.9■■■■□ 3.18
MTA1-209ENST00000469140 DHX57Q6P158 1386 aaKnown RBP34.9■■■■□ 3.18
MTA1-209ENST00000469140 DENND4BO75064 1496 aaPredicted RBP34.87■■■■□ 3.17
MTA1-209ENST00000469140 ANKRD50Q9ULJ7 1429 aa34.87■■■■□ 3.17
MTA1-209ENST00000469140 KDM6BO15054 1643 aa34.86■■■■□ 3.17
MTA1-209ENST00000469140 TSPOAP1O95153 1857 aa34.86■■■■□ 3.17
MTA1-209ENST00000469140 ZFYVE16Q7Z3T8 1539 aa34.85■■■■□ 3.17
MTA1-209ENST00000469140 KDM5CP41229 1560 aa34.82■■■■□ 3.16
MTA1-209ENST00000469140 INO80Q9ULG1 1556 aaPredicted RBP34.82■■■■□ 3.16
MTA1-209ENST00000469140 ATP7AQ04656 1500 aa34.81■■■■□ 3.16
MTA1-209ENST00000469140 DUOX2Q9NRD8 1548 aa34.79■■■■□ 3.16
MTA1-209ENST00000469140 CLSPNQ9HAW4 1339 aa34.79■■■■□ 3.16
MTA1-209ENST00000469140 ZEB1P37275 1124 aaPredicted RBP34.77■■■■□ 3.16
MTA1-209ENST00000469140 MLH3Q9UHC1 1453 aa34.77■■■■□ 3.16
MTA1-209ENST00000469140 RAPGEF3O95398 923 aa34.75■■■■□ 3.15
MTA1-209ENST00000469140 TRIM52Q96A61 297 aa34.75■■■■□ 3.15
MTA1-209ENST00000469140 MYT1LQ9UL68 1186 aa34.75■■■■□ 3.15
MTA1-209ENST00000469140 RICTORQ6R327 1708 aa34.72■■■■□ 3.15
MTA1-209ENST00000469140 ERBINQ96RT1 1412 aa34.71■■■■□ 3.15
MTA1-209ENST00000469140 HECW2Q9P2P5 1572 aa34.7■■■■□ 3.15
MTA1-209ENST00000469140 KIDINS220Q9ULH0 1771 aa34.7■■■■□ 3.15
MTA1-209ENST00000469140 TRHP20396 242 aaPredicted RBP34.7■■■■□ 3.14
MTA1-209ENST00000469140 FRMPD1Q5SYB0 1578 aa34.64■■■■□ 3.14
MTA1-209ENST00000469140 DHX29Q7Z478 1369 aaKnown RBP34.63■■■■□ 3.13
MTA1-209ENST00000469140 ZMYM4Q5VZL5 1548 aa34.62■■■■□ 3.13
MTA1-209ENST00000469140 MPHOSPH9Q99550 1183 aa34.6■■■■□ 3.13
MTA1-209ENST00000469140 MAGI2Q86UL8 1455 aa34.58■■■■□ 3.13
MTA1-209ENST00000469140 KDM5DQ9BY66 1539 aa34.57■■■■□ 3.12
MTA1-209ENST00000469140 NUP155O75694 1391 aa34.56■■■■□ 3.12
MTA1-209ENST00000469140 A2MP01023 1474 aa34.56■■■■□ 3.12
MTA1-209ENST00000469140 UNC13BO14795 1591 aa34.54■■■■□ 3.12
MTA1-209ENST00000469140 PZPP20742 1482 aa34.54■■■■□ 3.12
MTA1-209ENST00000469140 COL17A1Q9UMD9 1497 aaPredicted RBP34.54■■■■□ 3.12
MTA1-209ENST00000469140 SLC4A1APQ9BWU0 796 aaKnown RBP34.54■■■■□ 3.12
MTA1-209ENST00000469140 ABCA6Q8N139 1617 aa34.53■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms