RNA–Protein interactions for RNA: ENST00000469122.5

RAB5A-206, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-206ENST00000469122 L3MBTL3Q96JM7 780 aaPredicted RBP12.09□□□□□ -0.47
RAB5A-206ENST00000469122 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
RAB5A-206ENST00000469122 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
RAB5A-206ENST00000469122 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
RAB5A-206ENST00000469122 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
RAB5A-206ENST00000469122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.493e-6■■■□□ 15.8
RAB5A-206ENST00000469122 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
RAB5A-206ENST00000469122 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
RAB5A-206ENST00000469122 SOX12O15370 315 aa11.97□□□□□ -0.49
RAB5A-206ENST00000469122 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
RAB5A-206ENST00000469122 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
RAB5A-206ENST00000469122 HOXB3P14651 431 aaPredicted RBP11.96□□□□□ -0.49
RAB5A-206ENST00000469122 NLRP6P59044 892 aa11.95□□□□□ -0.5
RAB5A-206ENST00000469122 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
RAB5A-206ENST00000469122 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
RAB5A-206ENST00000469122 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
RAB5A-206ENST00000469122 MFRPQ9BY79 579 aa11.93□□□□□ -0.5
RAB5A-206ENST00000469122 TSHZ2Q9NRE2 1034 aa11.92□□□□□ -0.5
RAB5A-206ENST00000469122 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
RAB5A-206ENST00000469122 G3V3G9 751 aa11.87□□□□□ -0.51
RAB5A-206ENST00000469122 MYT1LQ9UL68 1186 aa11.86□□□□□ -0.51
RAB5A-206ENST00000469122 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
RAB5A-206ENST00000469122 ERBB3P21860 1342 aa11.84□□□□□ -0.51
RAB5A-206ENST00000469122 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
RAB5A-206ENST00000469122 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
RAB5A-206ENST00000469122 DOK7Q18PE1 504 aa11.8□□□□□ -0.52
RAB5A-206ENST00000469122 PPP1R37O75864 691 aa11.77□□□□□ -0.53
RAB5A-206ENST00000469122 PTGER2P43116 358 aa11.77□□□□□ -0.53
RAB5A-206ENST00000469122 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
RAB5A-206ENST00000469122 KDM2AQ9Y2K7 1162 aa11.77□□□□□ -0.53
RAB5A-206ENST00000469122 VARS2Q5ST30 1063 aaKnown RBP11.76□□□□□ -0.53
RAB5A-206ENST00000469122 ZNF687Q8N1G0 1237 aa11.75□□□□□ -0.53
RAB5A-206ENST00000469122 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
RAB5A-206ENST00000469122 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
RAB5A-206ENST00000469122 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
RAB5A-206ENST00000469122 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
RAB5A-206ENST00000469122 GPR153Q6NV75 609 aa11.62□□□□□ -0.55
RAB5A-206ENST00000469122 PDE4AP27815 886 aa11.61□□□□□ -0.55
RAB5A-206ENST00000469122 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
RAB5A-206ENST00000469122 TMEM92Q6UXU6 159 aa11.59□□□□□ -0.55
RAB5A-206ENST00000469122 BCANQ96GW7 911 aa11.58□□□□□ -0.56
RAB5A-206ENST00000469122 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
RAB5A-206ENST00000469122 LARP6Q9BRS8 491 aaKnown RBP11.56□□□□□ -0.56
RAB5A-206ENST00000469122 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
RAB5A-206ENST00000469122 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
RAB5A-206ENST00000469122 CRISPLD2Q9H0B8 497 aa11.53□□□□□ -0.56
RAB5A-206ENST00000469122 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
RAB5A-206ENST00000469122 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
RAB5A-206ENST00000469122 NBR1Q14596 966 aa11.51□□□□□ -0.57
RAB5A-206ENST00000469122 LSM11P83369 360 aaKnown RBP eCLIP11.5□□□□□ -0.574e-8■■□□□ 14.1
RAB5A-206ENST00000469122 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
RAB5A-206ENST00000469122 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
RAB5A-206ENST00000469122 MFSD10Q14728 455 aa11.48□□□□□ -0.57
RAB5A-206ENST00000469122 E2F4Q16254 413 aa11.48□□□□□ -0.57
RAB5A-206ENST00000469122 ARSIQ5FYB1 569 aa11.47□□□□□ -0.57
RAB5A-206ENST00000469122 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.57
RAB5A-206ENST00000469122 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.574e-7■■■■□ 23.5
RAB5A-206ENST00000469122 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
RAB5A-206ENST00000469122 KCNV2Q8TDN2 545 aa11.45□□□□□ -0.58
RAB5A-206ENST00000469122 C2orf72A6NCS6 295 aa11.42□□□□□ -0.58
RAB5A-206ENST00000469122 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
RAB5A-206ENST00000469122 PBX2P40425 430 aa11.41□□□□□ -0.58
RAB5A-206ENST00000469122 FOXK1P85037 733 aa11.41□□□□□ -0.58
RAB5A-206ENST00000469122 DSG2Q14126 1118 aa11.4□□□□□ -0.58
RAB5A-206ENST00000469122 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
RAB5A-206ENST00000469122 KIF3CO14782 793 aa11.37□□□□□ -0.59
RAB5A-206ENST00000469122 PLPP6Q8IY26 295 aa11.37□□□□□ -0.59
RAB5A-206ENST00000469122 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
RAB5A-206ENST00000469122 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
RAB5A-206ENST00000469122 NUDT7P0C024 238 aa11.31□□□□□ -0.6
RAB5A-206ENST00000469122 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
RAB5A-206ENST00000469122 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
RAB5A-206ENST00000469122 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
RAB5A-206ENST00000469122 EMILIN3Q9NT22 766 aa11.26□□□□□ -0.61
RAB5A-206ENST00000469122 DPYSL4O14531 572 aa11.25□□□□□ -0.61
RAB5A-206ENST00000469122 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
RAB5A-206ENST00000469122 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
RAB5A-206ENST00000469122 LHX6Q9UPM6 363 aa11.24□□□□□ -0.61
RAB5A-206ENST00000469122 ADGRD1Q6QNK2 874 aa11.23□□□□□ -0.61
RAB5A-206ENST00000469122 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
RAB5A-206ENST00000469122 SEMA3EO15041 775 aa11.21□□□□□ -0.61
RAB5A-206ENST00000469122 TBC1D12O60347 775 aa11.21□□□□□ -0.61
RAB5A-206ENST00000469122 RGS20O76081 388 aa11.21□□□□□ -0.61
RAB5A-206ENST00000469122 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
RAB5A-206ENST00000469122 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
RAB5A-206ENST00000469122 OXER1Q8TDS5 423 aa11.19□□□□□ -0.62
RAB5A-206ENST00000469122 PDIA6Q15084 440 aa11.18□□□□□ -0.62
RAB5A-206ENST00000469122 TESPA1A2RU30 521 aaPredicted RBP11.17□□□□□ -0.62
RAB5A-206ENST00000469122 TK2O00142 265 aa11.17□□□□□ -0.62
RAB5A-206ENST00000469122 ARHGAP33O14559 1287 aa11.17□□□□□ -0.62
RAB5A-206ENST00000469122 SLC34A2O95436 690 aa11.17□□□□□ -0.62
RAB5A-206ENST00000469122 HRO43593 1189 aa11.16□□□□□ -0.62
RAB5A-206ENST00000469122 PTCD2Q8WV60 388 aaKnown RBP11.16□□□□□ -0.62
RAB5A-206ENST00000469122 TPRNQ4KMQ1 711 aa11.14□□□□□ -0.63
RAB5A-206ENST00000469122 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
RAB5A-206ENST00000469122 EVI5O60447 810 aa11.12□□□□□ -0.63
RAB5A-206ENST00000469122 LMOD2Q6P5Q4 547 aa11.12□□□□□ -0.63
RAB5A-206ENST00000469122 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
RAB5A-206ENST00000469122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
RAB5A-206ENST00000469122 IRX2Q9BZI1 471 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms