RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-208ENST00000469102 LCE2DQ5TA82 110 aaPredicted RBP12.73□□□□□ -0.37
CMC1-208ENST00000469102 CFAP44Q96MT7 982 aa12.71□□□□□ -0.37
CMC1-208ENST00000469102 HOXB3P14651 431 aaPredicted RBP12.7□□□□□ -0.38
CMC1-208ENST00000469102 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
CMC1-208ENST00000469102 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
CMC1-208ENST00000469102 SNPHO15079 494 aa12.67□□□□□ -0.38
CMC1-208ENST00000469102 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
CMC1-208ENST00000469102 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
CMC1-208ENST00000469102 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
CMC1-208ENST00000469102 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
CMC1-208ENST00000469102 ST18O60284 1047 aa12.65□□□□□ -0.38
CMC1-208ENST00000469102 FOXK1P85037 733 aa12.61□□□□□ -0.39
CMC1-208ENST00000469102 DSG2Q14126 1118 aa12.61□□□□□ -0.39
CMC1-208ENST00000469102 PDE4AP27815 886 aa12.58□□□□□ -0.4
CMC1-208ENST00000469102 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
CMC1-208ENST00000469102 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
CMC1-208ENST00000469102 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
CMC1-208ENST00000469102 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
CMC1-208ENST00000469102 MFSD10Q14728 455 aa12.54□□□□□ -0.4
CMC1-208ENST00000469102 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
CMC1-208ENST00000469102 SLC34A2O95436 690 aa12.52□□□□□ -0.41
CMC1-208ENST00000469102 PPP1R15BQ5SWA1 713 aa12.52□□□□□ -0.41
CMC1-208ENST00000469102 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
CMC1-208ENST00000469102 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.41
CMC1-208ENST00000469102 HOXB1P14653 301 aaPredicted RBP12.5□□□□□ -0.41
CMC1-208ENST00000469102 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
CMC1-208ENST00000469102 ZSWIM6Q9HCJ5 1215 aa12.5□□□□□ -0.41
CMC1-208ENST00000469102 POTEMA6NI47 508 aa12.49□□□□□ -0.41
CMC1-208ENST00000469102 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
CMC1-208ENST00000469102 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
CMC1-208ENST00000469102 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
CMC1-208ENST00000469102 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
CMC1-208ENST00000469102 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■□□□□ 8.5
CMC1-208ENST00000469102 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
CMC1-208ENST00000469102 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
CMC1-208ENST00000469102 EMP3P54852 163 aa12.42□□□□□ -0.42
CMC1-208ENST00000469102 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
CMC1-208ENST00000469102 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
CMC1-208ENST00000469102 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
CMC1-208ENST00000469102 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
CMC1-208ENST00000469102 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
CMC1-208ENST00000469102 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
CMC1-208ENST00000469102 NUDT7P0C024 238 aa12.38□□□□□ -0.43
CMC1-208ENST00000469102 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.43
CMC1-208ENST00000469102 FAM205CA6NFA0 338 aa12.36□□□□□ -0.43
CMC1-208ENST00000469102 HS3ST6Q96QI5 342 aa12.34□□□□□ -0.43
CMC1-208ENST00000469102 TBC1D12O60347 775 aa12.32□□□□□ -0.44
CMC1-208ENST00000469102 ERBB3P21860 1342 aa12.32□□□□□ -0.44
CMC1-208ENST00000469102 ZNF316A6NFI3 1004 aaPredicted RBP12.31□□□□□ -0.44
CMC1-208ENST00000469102 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
CMC1-208ENST00000469102 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
CMC1-208ENST00000469102 LHX6Q9UPM6 363 aa12.3□□□□□ -0.44
CMC1-208ENST00000469102 E2F4Q16254 413 aa12.29□□□□□ -0.44
CMC1-208ENST00000469102 VARS2Q5ST30 1063 aaKnown RBP12.29□□□□□ -0.44
CMC1-208ENST00000469102 CDAN1Q8IWY9 1227 aa12.28□□□□□ -0.44
CMC1-208ENST00000469102 MAP3K9P80192 1104 aa12.26□□□□□ -0.45
CMC1-208ENST00000469102 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
CMC1-208ENST00000469102 DPYSL4O14531 572 aa12.25□□□□□ -0.45
CMC1-208ENST00000469102 EVI5O60447 810 aa12.24□□□□□ -0.45
CMC1-208ENST00000469102 KDM2AQ9Y2K7 1162 aa12.23□□□□□ -0.45
CMC1-208ENST00000469102 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
CMC1-208ENST00000469102 ARIH1Q9Y4X5 557 aaPredicted RBP12.21□□□□□ -0.45
CMC1-208ENST00000469102 ZNF687Q8N1G0 1237 aa12.2□□□□□ -0.46
CMC1-208ENST00000469102 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
CMC1-208ENST00000469102 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
CMC1-208ENST00000469102 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
CMC1-208ENST00000469102 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
CMC1-208ENST00000469102 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
CMC1-208ENST00000469102 FOSBP53539 338 aa12.15□□□□□ -0.46
CMC1-208ENST00000469102 PDIA6Q15084 440 aa12.15□□□□□ -0.46
CMC1-208ENST00000469102 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
CMC1-208ENST00000469102 ZNF454Q8N9F8 522 aa12.12□□□□□ -0.47
CMC1-208ENST00000469102 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
CMC1-208ENST00000469102 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
CMC1-208ENST00000469102 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
CMC1-208ENST00000469102 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
CMC1-208ENST00000469102 PTGER2P43116 358 aa12.1□□□□□ -0.47
CMC1-208ENST00000469102 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
CMC1-208ENST00000469102 AXIN2Q9Y2T1 843 aa12.09□□□□□ -0.47
CMC1-208ENST00000469102 DDX12PQ92771 950 aa12.07□□□□□ -0.48
CMC1-208ENST00000469102 PBX2P40425 430 aa12.06□□□□□ -0.48
CMC1-208ENST00000469102 PHF14O94880 888 aa12.05□□□□□ -0.48
CMC1-208ENST00000469102 P3H3Q8IVL6 736 aa12.05□□□□□ -0.48
CMC1-208ENST00000469102 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
CMC1-208ENST00000469102 ADAM33Q9BZ11 813 aa12.05□□□□□ -0.48
CMC1-208ENST00000469102 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
CMC1-208ENST00000469102 ARHGAP33O14559 1287 aa12.03□□□□□ -0.48
CMC1-208ENST00000469102 PSEN2P49810 448 aa12.03□□□□□ -0.48
CMC1-208ENST00000469102 LSM11P83369 360 aaKnown RBP eCLIP12.01□□□□□ -0.49
CMC1-208ENST00000469102 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
CMC1-208ENST00000469102 DMRTA1Q5VZB9 504 aa12□□□□□ -0.49
CMC1-208ENST00000469102 KCNK17Q96T54 332 aa12□□□□□ -0.49
CMC1-208ENST00000469102 EPAS1Q99814 870 aa12□□□□□ -0.49
CMC1-208ENST00000469102 PRIM1P49642 420 aaKnown RBP11.99□□□□□ -0.49
CMC1-208ENST00000469102 FBXW7Q969H0 707 aa11.99□□□□□ -0.49
CMC1-208ENST00000469102 GRXCR2A6NFK2 248 aa11.98□□□□□ -0.49
CMC1-208ENST00000469102 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
CMC1-208ENST00000469102 MLLT3P42568 568 aaPredicted RBP11.97□□□□□ -0.49
CMC1-208ENST00000469102 NBR1Q14596 966 aa11.97□□□□□ -0.49
CMC1-208ENST00000469102 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms