RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 ARID4BQ4LE39 1312 aaPredicted RBP20.63■□□□□ 0.89
CLRN1-204ENST00000468836 POGZQ7Z3K3 1410 aa20.61■□□□□ 0.89
CLRN1-204ENST00000468836 MYT1LQ9UL68 1186 aa20.61■□□□□ 0.89
CLRN1-204ENST00000468836 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
CLRN1-204ENST00000468836 RICTORQ6R327 1708 aa20.59■□□□□ 0.89
CLRN1-204ENST00000468836 PREX2Q70Z35 1606 aa20.59■□□□□ 0.89
CLRN1-204ENST00000468836 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
CLRN1-204ENST00000468836 EHBP1L1Q8N3D4 1523 aa20.58■□□□□ 0.89
CLRN1-204ENST00000468836 ARHGEF40Q8TER5 1519 aa20.58■□□□□ 0.89
CLRN1-204ENST00000468836 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.89
CLRN1-204ENST00000468836 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.88
CLRN1-204ENST00000468836 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.88
CLRN1-204ENST00000468836 MAGI2Q86UL8 1455 aa20.57■□□□□ 0.88
CLRN1-204ENST00000468836 ZNF518AQ6AHZ1 1483 aa20.56■□□□□ 0.88
CLRN1-204ENST00000468836 ILDR1Q86SU0 546 aaPredicted RBP20.55■□□□□ 0.88
CLRN1-204ENST00000468836 CFDP1Q9UEE9 299 aaPredicted RBP20.53■□□□□ 0.88
CLRN1-204ENST00000468836 YEATS2Q9ULM3 1422 aa20.53■□□□□ 0.88
CLRN1-204ENST00000468836 CDC42BPBQ9Y5S2 1711 aa20.52■□□□□ 0.88
CLRN1-204ENST00000468836 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.87
CLRN1-204ENST00000468836 AFAP1Q8N556 730 aa20.51■□□□□ 0.87
CLRN1-204ENST00000468836 ABCC1P33527 1531 aa20.51■□□□□ 0.87
CLRN1-204ENST00000468836 CDC42BPAQ5VT25 1732 aa20.5■□□□□ 0.87
CLRN1-204ENST00000468836 APLP2Q06481 763 aa20.49■□□□□ 0.87
CLRN1-204ENST00000468836 TIAM1Q13009 1591 aa20.49■□□□□ 0.87
CLRN1-204ENST00000468836 PLEKHH2Q8IVE3 1493 aa20.47■□□□□ 0.87
CLRN1-204ENST00000468836 C9orf84Q5VXU9 1444 aa20.46■□□□□ 0.87
CLRN1-204ENST00000468836 KDM5CP41229 1560 aa20.46■□□□□ 0.87
CLRN1-204ENST00000468836 TRAPPC8Q9Y2L5 1435 aa20.45■□□□□ 0.86
CLRN1-204ENST00000468836 ATP10AO60312 1499 aa20.45■□□□□ 0.86
CLRN1-204ENST00000468836 HECW2Q9P2P5 1572 aa20.45■□□□□ 0.86
CLRN1-204ENST00000468836 SAMD9LQ8IVG5 1584 aa20.44■□□□□ 0.86
CLRN1-204ENST00000468836 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
CLRN1-204ENST00000468836 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
CLRN1-204ENST00000468836 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
CLRN1-204ENST00000468836 SYCP2Q9BX26 1530 aa20.43■□□□□ 0.86
CLRN1-204ENST00000468836 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
CLRN1-204ENST00000468836 MLECQ14165 292 aa20.43■□□□□ 0.86
CLRN1-204ENST00000468836 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLRN1-204ENST00000468836 LRRC9Q6ZRR7 1453 aa20.42■□□□□ 0.86
CLRN1-204ENST00000468836 BCORL1Q5H9F3 1711 aa20.41■□□□□ 0.86
CLRN1-204ENST00000468836 KIAA1107Q9UPP5 1409 aa20.41■□□□□ 0.86
CLRN1-204ENST00000468836 MLH3Q9UHC1 1453 aa20.41■□□□□ 0.86
CLRN1-204ENST00000468836 SPAG9O60271 1321 aaKnown RBP20.4■□□□□ 0.86
CLRN1-204ENST00000468836 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
CLRN1-204ENST00000468836 ADAMTSL3P82987 1691 aa20.38■□□□□ 0.85
CLRN1-204ENST00000468836 MADDQ8WXG6 1647 aa20.38■□□□□ 0.85
CLRN1-204ENST00000468836 PTPRMP28827 1452 aa20.37■□□□□ 0.85
CLRN1-204ENST00000468836 DIP2CQ9Y2E4 1556 aa20.36■□□□□ 0.85
CLRN1-204ENST00000468836 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
CLRN1-204ENST00000468836 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
CLRN1-204ENST00000468836 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
CLRN1-204ENST00000468836 ABCA6Q8N139 1617 aa20.34■□□□□ 0.85
CLRN1-204ENST00000468836 ESF1Q9H501 851 aaKnown RBP20.32■□□□□ 0.84
CLRN1-204ENST00000468836 CAMSAP2Q08AD1 1489 aa20.31■□□□□ 0.84
CLRN1-204ENST00000468836 REREQ9P2R6 1566 aa20.31■□□□□ 0.84
CLRN1-204ENST00000468836 RIMS1Q86UR5 1692 aaKnown RBP20.31■□□□□ 0.84
CLRN1-204ENST00000468836 ATP7AQ04656 1500 aa20.31■□□□□ 0.84
CLRN1-204ENST00000468836 SIGLEC1Q9BZZ2 1709 aa20.3■□□□□ 0.84
CLRN1-204ENST00000468836 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
CLRN1-204ENST00000468836 CCDC141Q6ZP82 1450 aa20.27■□□□□ 0.84
CLRN1-204ENST00000468836 RSPH4AQ5TD94 716 aa20.27■□□□□ 0.84
CLRN1-204ENST00000468836 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.83
CLRN1-204ENST00000468836 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
CLRN1-204ENST00000468836 AGLP35573 1532 aa20.26■□□□□ 0.83
CLRN1-204ENST00000468836 INO80Q9ULG1 1556 aaPredicted RBP20.25■□□□□ 0.83
CLRN1-204ENST00000468836 FER1L4A9Z1Z3 1794 aa20.25■□□□□ 0.83
CLRN1-204ENST00000468836 TSPY4P0CV99 314 aa20.24■□□□□ 0.83
CLRN1-204ENST00000468836 TSPY10P0CW01 314 aa20.24■□□□□ 0.83
CLRN1-204ENST00000468836 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
CLRN1-204ENST00000468836 A2MP01023 1474 aa20.24■□□□□ 0.83
CLRN1-204ENST00000468836 RTEL1-TNFRSF6BF6WH68 1400 aa20.22■□□□□ 0.83
CLRN1-204ENST00000468836 ARHGEF5Q12774 1597 aa20.18■□□□□ 0.82
CLRN1-204ENST00000468836 CNTLNQ9NXG0 1405 aa20.17■□□□□ 0.82
CLRN1-204ENST00000468836 GGT6Q6P531 493 aa20.16■□□□□ 0.82
CLRN1-204ENST00000468836 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
CLRN1-204ENST00000468836 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
CLRN1-204ENST00000468836 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
CLRN1-204ENST00000468836 DHX29Q7Z478 1369 aaKnown RBP20.14■□□□□ 0.81
CLRN1-204ENST00000468836 FGD6Q6ZV73 1430 aa20.12■□□□□ 0.81
CLRN1-204ENST00000468836 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
CLRN1-204ENST00000468836 PTPN23Q9H3S7 1636 aa20.1■□□□□ 0.81
CLRN1-204ENST00000468836 KIF3BO15066 747 aa20.1■□□□□ 0.81
CLRN1-204ENST00000468836 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
CLRN1-204ENST00000468836 UHRF1BP1Q6BDS2 1440 aa20.08■□□□□ 0.8
CLRN1-204ENST00000468836 MAST1Q9Y2H9 1570 aa20.07■□□□□ 0.8
CLRN1-204ENST00000468836 FAM50AQ14320 339 aaKnown RBP20.06■□□□□ 0.8
CLRN1-204ENST00000468836 HSPA2P54652 639 aa20.05■□□□□ 0.8
CLRN1-204ENST00000468836 ZMYM3Q14202 1370 aa20.05■□□□□ 0.8
CLRN1-204ENST00000468836 TCOF1Q13428 1488 aaKnown RBP20.05■□□□□ 0.8
CLRN1-204ENST00000468836 SHANK2Q9UPX8 1470 aa20.04■□□□□ 0.8
CLRN1-204ENST00000468836 C3P01024 1663 aa20.03■□□□□ 0.8
CLRN1-204ENST00000468836 ABCC5O15440 1437 aa20.02■□□□□ 0.8
CLRN1-204ENST00000468836 DAPK1P53355 1430 aa20.02■□□□□ 0.8
CLRN1-204ENST00000468836 MROH2AA6NES4 1674 aa20.02■□□□□ 0.8
CLRN1-204ENST00000468836 PREX1Q8TCU6 1659 aa20.02■□□□□ 0.8
CLRN1-204ENST00000468836 CLTCQ00610 1675 aaKnown RBP20.01■□□□□ 0.79
CLRN1-204ENST00000468836 WASHC2CQ9Y4E1 1318 aa20.01■□□□□ 0.79
CLRN1-204ENST00000468836 KIF15Q9NS87 1388 aa20■□□□□ 0.79
CLRN1-204ENST00000468836 DNMT1P26358 1616 aaKnown RBP19.99■□□□□ 0.79
CLRN1-204ENST00000468836 KDM5DQ9BY66 1539 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms