RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
GPNMB-207ENST00000468723 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
GPNMB-207ENST00000468723 CADPS2Q86UW7 1296 aa10.46□□□□□ -0.73
GPNMB-207ENST00000468723 FAM163AQ96GL9 167 aaPredicted RBP10.44□□□□□ -0.74
GPNMB-207ENST00000468723 KIF3CO14782 793 aa10.43□□□□□ -0.74
GPNMB-207ENST00000468723 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
GPNMB-207ENST00000468723 TSHZ2Q9NRE2 1034 aa10.41□□□□□ -0.74
GPNMB-207ENST00000468723 NCKAP5LQ9HCH0 1330 aa10.4□□□□□ -0.74
GPNMB-207ENST00000468723 SNPHO15079 494 aa10.4□□□□□ -0.74
GPNMB-207ENST00000468723 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
GPNMB-207ENST00000468723 PDE4AP27815 886 aa10.39□□□□□ -0.75
GPNMB-207ENST00000468723 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
GPNMB-207ENST00000468723 CRISPLD2Q9H0B8 497 aa10.39□□□□□ -0.75
GPNMB-207ENST00000468723 DSG2Q14126 1118 aa10.38□□□□□ -0.75
GPNMB-207ENST00000468723 HOXB3P14651 431 aaPredicted RBP10.37□□□□□ -0.75
GPNMB-207ENST00000468723 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
GPNMB-207ENST00000468723 ST18O60284 1047 aa10.35□□□□□ -0.75
GPNMB-207ENST00000468723 FOXK1P85037 733 aa10.35□□□□□ -0.75
GPNMB-207ENST00000468723 DOK7Q18PE1 504 aa10.34□□□□□ -0.75
GPNMB-207ENST00000468723 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
GPNMB-207ENST00000468723 PPP1R15BQ5SWA1 713 aa10.33□□□□□ -0.76
GPNMB-207ENST00000468723 LCE2DQ5TA82 110 aaPredicted RBP10.33□□□□□ -0.76
GPNMB-207ENST00000468723 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
GPNMB-207ENST00000468723 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
GPNMB-207ENST00000468723 MFSD10Q14728 455 aa10.29□□□□□ -0.76
GPNMB-207ENST00000468723 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
GPNMB-207ENST00000468723 MARVELD3Q96A59 401 aa10.28□□□□□ -0.76
GPNMB-207ENST00000468723 ARSIQ5FYB1 569 aa10.27□□□□□ -0.77
GPNMB-207ENST00000468723 KHSRPQ92945 711 aaKnown RBP eCLIP10.27□□□□□ -0.77
GPNMB-207ENST00000468723 UPF1Q92900 1129 aaKnown RBP eCLIP10.26□□□□□ -0.77
GPNMB-207ENST00000468723 WDR70Q9NW82 654 aa10.26□□□□□ -0.77
GPNMB-207ENST00000468723 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
GPNMB-207ENST00000468723 PCDHGA4Q9Y5G9 962 aa10.24□□□□□ -0.77
GPNMB-207ENST00000468723 SLC34A2O95436 690 aa10.23□□□□□ -0.77
GPNMB-207ENST00000468723 HOXB1P14653 301 aaPredicted RBP10.23□□□□□ -0.77
GPNMB-207ENST00000468723 ZSWIM6Q9HCJ5 1215 aa10.22□□□□□ -0.77
GPNMB-207ENST00000468723 POTEMA6NI47 508 aa10.21□□□□□ -0.77
GPNMB-207ENST00000468723 EMP3P54852 163 aa10.21□□□□□ -0.77
GPNMB-207ENST00000468723 NUDT7P0C024 238 aa10.2□□□□□ -0.78
GPNMB-207ENST00000468723 POTEGQ6S5H5 508 aa10.2□□□□□ -0.78
GPNMB-207ENST00000468723 PTCD2Q8WV60 388 aaKnown RBP10.2□□□□□ -0.78
GPNMB-207ENST00000468723 EMILIN3Q9NT22 766 aa10.2□□□□□ -0.78
GPNMB-207ENST00000468723 OXER1Q8TDS5 423 aa10.19□□□□□ -0.78
GPNMB-207ENST00000468723 TBC1D12O60347 775 aa10.18□□□□□ -0.78
GPNMB-207ENST00000468723 FAM205CA6NFA0 338 aa10.17□□□□□ -0.78
GPNMB-207ENST00000468723 MAP3K9P80192 1104 aa10.16□□□□□ -0.78
GPNMB-207ENST00000468723 CAMK2BQ13554 666 aa10.16□□□□□ -0.78
GPNMB-207ENST00000468723 E2F4Q16254 413 aa10.16□□□□□ -0.78
GPNMB-207ENST00000468723 ERBB3P21860 1342 aa10.14□□□□□ -0.79
GPNMB-207ENST00000468723 KDM2AQ9Y2K7 1162 aa10.14□□□□□ -0.79
GPNMB-207ENST00000468723 POTEB3A0JP26 581 aa10.13□□□□□ -0.79
GPNMB-207ENST00000468723 DPYSL4O14531 572 aa10.13□□□□□ -0.79
GPNMB-207ENST00000468723 POTEBQ6S5H4 581 aa10.13□□□□□ -0.79
GPNMB-207ENST00000468723 HS3ST6Q96QI5 342 aa10.12□□□□□ -0.79
GPNMB-207ENST00000468723 LHX6Q9UPM6 363 aa10.12□□□□□ -0.79
GPNMB-207ENST00000468723 ZNF316A6NFI3 1004 aaPredicted RBP10.1□□□□□ -0.79
GPNMB-207ENST00000468723 EVI5O60447 810 aa10.1□□□□□ -0.79
GPNMB-207ENST00000468723 VARS2Q5ST30 1063 aaKnown RBP10.1□□□□□ -0.79
GPNMB-207ENST00000468723 KDM4FA0A1W2PPD8 638 aa10.09□□□□□ -0.79
GPNMB-207ENST00000468723 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
GPNMB-207ENST00000468723 KCNV2Q8TDN2 545 aa10.07□□□□□ -0.8
GPNMB-207ENST00000468723 CDAN1Q8IWY9 1227 aa10.05□□□□□ -0.8
GPNMB-207ENST00000468723 ANO8Q9HCE9 1232 aaPredicted RBP10.04□□□□□ -0.8
GPNMB-207ENST00000468723 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
GPNMB-207ENST00000468723 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
GPNMB-207ENST00000468723 ARIH1Q9Y4X5 557 aaPredicted RBP10□□□□□ -0.81
GPNMB-207ENST00000468723 PDIA6Q15084 440 aa9.99□□□□□ -0.81
GPNMB-207ENST00000468723 P3H3Q8IVL6 736 aa9.99□□□□□ -0.81
GPNMB-207ENST00000468723 ZNF687Q8N1G0 1237 aa9.99□□□□□ -0.81
GPNMB-207ENST00000468723 DDX12PQ92771 950 aa9.99□□□□□ -0.81
GPNMB-207ENST00000468723 SPDYE16A6NNV3 312 aaPredicted RBP9.98□□□□□ -0.81
GPNMB-207ENST00000468723 PSDA5PKW4 1024 aaPredicted RBP9.97□□□□□ -0.81
GPNMB-207ENST00000468723 FOSBP53539 338 aa9.97□□□□□ -0.81
GPNMB-207ENST00000468723 PPP4R3BQ5MIZ7 849 aa9.97□□□□□ -0.81
GPNMB-207ENST00000468723 PCDH10Q9P2E7 1040 aa9.97□□□□□ -0.81
GPNMB-207ENST00000468723 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
GPNMB-207ENST00000468723 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
GPNMB-207ENST00000468723 JPH4Q96JJ6 628 aa9.95□□□□□ -0.82
GPNMB-207ENST00000468723 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
GPNMB-207ENST00000468723 POTEEQ6S8J3 1075 aa9.94□□□□□ -0.82
GPNMB-207ENST00000468723 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
GPNMB-207ENST00000468723 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
GPNMB-207ENST00000468723 PHF14O94880 888 aa9.92□□□□□ -0.82
GPNMB-207ENST00000468723 PTGER2P43116 358 aa9.92□□□□□ -0.82
GPNMB-207ENST00000468723 ZDHHC16Q969W1 377 aa9.92□□□□□ -0.82
GPNMB-207ENST00000468723 ADAM33Q9BZ11 813 aa9.92□□□□□ -0.82
GPNMB-207ENST00000468723 SLC24A1O60721 1099 aa9.91□□□□□ -0.82
GPNMB-207ENST00000468723 PSEN2P49810 448 aa9.91□□□□□ -0.82
GPNMB-207ENST00000468723 RBM33Q96EV2 1170 aaKnown RBP9.91□□□□□ -0.82
GPNMB-207ENST00000468723 SEMA3EO15041 775 aa9.9□□□□□ -0.82
GPNMB-207ENST00000468723 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.82
GPNMB-207ENST00000468723 NBR1Q14596 966 aa9.9□□□□□ -0.82
GPNMB-207ENST00000468723 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
GPNMB-207ENST00000468723 KCNK17Q96T54 332 aa9.9□□□□□ -0.82
GPNMB-207ENST00000468723 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
GPNMB-207ENST00000468723 ANKRD13DQ6ZTN6 518 aa9.88□□□□□ -0.83
GPNMB-207ENST00000468723 EPAS1Q99814 870 aa9.88□□□□□ -0.83
GPNMB-207ENST00000468723 BCL2L12Q9HB09 334 aa9.88□□□□□ -0.83
GPNMB-207ENST00000468723 PBX2P40425 430 aa9.87□□□□□ -0.83
GPNMB-207ENST00000468723 PRIM1P49642 420 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms