RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CDK11AQ9UQ88 783 aaPredicted RBP18.01■□□□□ 0.47
COL4A6-205ENST00000468338 MYCNP04198 464 aaPredicted RBP18■□□□□ 0.47
COL4A6-205ENST00000468338 FYCO1Q9BQS8 1478 aa18■□□□□ 0.47
COL4A6-205ENST00000468338 ATXN8OSP0DMR3 200 aa17.99■□□□□ 0.47
COL4A6-205ENST00000468338 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
COL4A6-205ENST00000468338 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
COL4A6-205ENST00000468338 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
COL4A6-205ENST00000468338 TTC37Q6PGP7 1564 aa17.98■□□□□ 0.47
COL4A6-205ENST00000468338 LOC105371045A0A1W2PR82 267 aa17.97■□□□□ 0.47
COL4A6-205ENST00000468338 PLCH2O75038 1416 aa17.94■□□□□ 0.46
COL4A6-205ENST00000468338 KIF14Q15058 1648 aa17.93■□□□□ 0.46
COL4A6-205ENST00000468338 FANCAO15360 1455 aa17.93■□□□□ 0.46
COL4A6-205ENST00000468338 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
COL4A6-205ENST00000468338 CFAP74Q9C0B2 1584 aa17.89■□□□□ 0.45
COL4A6-205ENST00000468338 KDM4FA0A1W2PPD8 638 aa17.89■□□□□ 0.45
COL4A6-205ENST00000468338 RAPGEF3O95398 923 aa17.88■□□□□ 0.45
COL4A6-205ENST00000468338 FRMPD1Q5SYB0 1578 aa17.87■□□□□ 0.45
COL4A6-205ENST00000468338 MYO5CQ9NQX4 1742 aa17.87■□□□□ 0.45
COL4A6-205ENST00000468338 DENND4BO75064 1496 aaPredicted RBP17.86■□□□□ 0.45
COL4A6-205ENST00000468338 EFCAB2Q5VUJ9 269 aa17.85■□□□□ 0.45
COL4A6-205ENST00000468338 RICTORQ6R327 1708 aa17.84■□□□□ 0.45
COL4A6-205ENST00000468338 ADGRL1O94910 1474 aa17.82■□□□□ 0.44
COL4A6-205ENST00000468338 CDC42BPBQ9Y5S2 1711 aa17.81■□□□□ 0.44
COL4A6-205ENST00000468338 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
COL4A6-205ENST00000468338 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
COL4A6-205ENST00000468338 ZMYM4Q5VZL5 1548 aa17.8■□□□□ 0.44
COL4A6-205ENST00000468338 PREX2Q70Z35 1606 aa17.79■□□□□ 0.44
COL4A6-205ENST00000468338 ARHGAP5Q13017 1502 aa17.78■□□□□ 0.44
COL4A6-205ENST00000468338 POGZQ7Z3K3 1410 aa17.78■□□□□ 0.44
COL4A6-205ENST00000468338 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
COL4A6-205ENST00000468338 GPATCH8Q9UKJ3 1502 aaKnown RBP17.77■□□□□ 0.43
COL4A6-205ENST00000468338 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
COL4A6-205ENST00000468338 MTUS2Q5JR59 1369 aa17.76■□□□□ 0.43
COL4A6-205ENST00000468338 EHBP1L1Q8N3D4 1523 aa17.74■□□□□ 0.43
COL4A6-205ENST00000468338 ARHGEF40Q8TER5 1519 aa17.74■□□□□ 0.43
COL4A6-205ENST00000468338 AMER1Q5JTC6 1135 aaPredicted RBP17.73■□□□□ 0.43
COL4A6-205ENST00000468338 KDM5CP41229 1560 aa17.71■□□□□ 0.43
COL4A6-205ENST00000468338 TIAM1Q13009 1591 aa17.71■□□□□ 0.43
COL4A6-205ENST00000468338 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
COL4A6-205ENST00000468338 ABCC1P33527 1531 aa17.71■□□□□ 0.43
COL4A6-205ENST00000468338 MAP3K1Q13233 1512 aa17.71■□□□□ 0.43
COL4A6-205ENST00000468338 ARHGEF12Q9NZN5 1544 aa17.71■□□□□ 0.43
COL4A6-205ENST00000468338 YEATS2Q9ULM3 1422 aa17.71■□□□□ 0.43
COL4A6-205ENST00000468338 AFAP1Q8N556 730 aa17.7■□□□□ 0.42
COL4A6-205ENST00000468338 CCNB3Q8WWL7 1395 aa17.69■□□□□ 0.42
COL4A6-205ENST00000468338 ZFYVE16Q7Z3T8 1539 aa17.69■□□□□ 0.42
COL4A6-205ENST00000468338 SAMD9LQ8IVG5 1584 aa17.67■□□□□ 0.42
COL4A6-205ENST00000468338 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
COL4A6-205ENST00000468338 FKBP8Q14318 412 aa17.67■□□□□ 0.42
COL4A6-205ENST00000468338 ITSN2Q9NZM3 1697 aa17.67■□□□□ 0.42
COL4A6-205ENST00000468338 KIAA1107Q9UPP5 1409 aa17.66■□□□□ 0.42
COL4A6-205ENST00000468338 CFDP1Q9UEE9 299 aaPredicted RBP17.66■□□□□ 0.42
COL4A6-205ENST00000468338 MLH3Q9UHC1 1453 aa17.66■□□□□ 0.42
COL4A6-205ENST00000468338 ADAMTSL3P82987 1691 aa17.66■□□□□ 0.42
COL4A6-205ENST00000468338 LRRC9Q6ZRR7 1453 aa17.65■□□□□ 0.42
COL4A6-205ENST00000468338 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
COL4A6-205ENST00000468338 ATP10AO60312 1499 aa17.64■□□□□ 0.41
COL4A6-205ENST00000468338 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
COL4A6-205ENST00000468338 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
COL4A6-205ENST00000468338 SIGLEC1Q9BZZ2 1709 aa17.64■□□□□ 0.41
COL4A6-205ENST00000468338 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
COL4A6-205ENST00000468338 HECW2Q9P2P5 1572 aa17.63■□□□□ 0.41
COL4A6-205ENST00000468338 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
COL4A6-205ENST00000468338 RTN4Q9NQC3 1192 aaKnown RBP17.62■□□□□ 0.41
COL4A6-205ENST00000468338 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
COL4A6-205ENST00000468338 C9orf84Q5VXU9 1444 aa17.61■□□□□ 0.41
COL4A6-205ENST00000468338 SYCP2Q9BX26 1530 aa17.61■□□□□ 0.41
COL4A6-205ENST00000468338 ARID4BQ4LE39 1312 aaPredicted RBP17.6■□□□□ 0.41
COL4A6-205ENST00000468338 REREQ9P2R6 1566 aa17.6■□□□□ 0.41
COL4A6-205ENST00000468338 DIP2CQ9Y2E4 1556 aa17.59■□□□□ 0.41
COL4A6-205ENST00000468338 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
COL4A6-205ENST00000468338 HNRNPMP52272 730 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL4A6-205ENST00000468338 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.41
COL4A6-205ENST00000468338 MBD5Q9P267 1494 aa17.58■□□□□ 0.41
COL4A6-205ENST00000468338 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.4
COL4A6-205ENST00000468338 ABCA6Q8N139 1617 aa17.57■□□□□ 0.4
COL4A6-205ENST00000468338 PTPRMP28827 1452 aa17.56■□□□□ 0.4
COL4A6-205ENST00000468338 MADDQ8WXG6 1647 aa17.55■□□□□ 0.4
COL4A6-205ENST00000468338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL4A6-205ENST00000468338 SPAG9O60271 1321 aaKnown RBP17.53■□□□□ 0.4
COL4A6-205ENST00000468338 AGLP35573 1532 aa17.53■□□□□ 0.4
COL4A6-205ENST00000468338 INO80Q9ULG1 1556 aaPredicted RBP17.52■□□□□ 0.39
COL4A6-205ENST00000468338 APLP2Q06481 763 aa17.51■□□□□ 0.39
COL4A6-205ENST00000468338 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
COL4A6-205ENST00000468338 MYT1LQ9UL68 1186 aa17.51■□□□□ 0.39
COL4A6-205ENST00000468338 ATP7AQ04656 1500 aa17.51■□□□□ 0.39
COL4A6-205ENST00000468338 CAMSAP2Q08AD1 1489 aa17.5■□□□□ 0.39
COL4A6-205ENST00000468338 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
COL4A6-205ENST00000468338 RTEL1-TNFRSF6BF6WH68 1400 aa17.49■□□□□ 0.39
COL4A6-205ENST00000468338 MYOM3Q5VTT5 1437 aa17.49■□□□□ 0.39
COL4A6-205ENST00000468338 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
COL4A6-205ENST00000468338 MLECQ14165 292 aa17.47■□□□□ 0.39
COL4A6-205ENST00000468338 CCDC141Q6ZP82 1450 aa17.47■□□□□ 0.39
COL4A6-205ENST00000468338 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
COL4A6-205ENST00000468338 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
COL4A6-205ENST00000468338 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
COL4A6-205ENST00000468338 PLXNC1O60486 1568 aa17.45■□□□□ 0.38
COL4A6-205ENST00000468338 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
COL4A6-205ENST00000468338 A2MP01023 1474 aa17.44■□□□□ 0.38
COL4A6-205ENST00000468338 ADGBQ8N7X0 1667 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms