RNA–Protein interactions for RNA: ENST00000468318.5

CNIH4-206, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 2

Gene CNIH4, Length 1,525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-206ENST00000468318 KANK4Q5T7N3 995 aaPredicted RBP28.63■■■□□ 2.17
CNIH4-206ENST00000468318 NCOA2Q15596 1464 aa28.62■■■□□ 2.17
CNIH4-206ENST00000468318 APLP2Q06481 763 aa28.62■■■□□ 2.17
CNIH4-206ENST00000468318 RICTORQ6R327 1708 aa28.61■■■□□ 2.17
CNIH4-206ENST00000468318 FRMPD1Q5SYB0 1578 aa28.6■■■□□ 2.17
CNIH4-206ENST00000468318 AKNAQ7Z591 1439 aa28.58■■■□□ 2.17
CNIH4-206ENST00000468318 GPATCH8Q9UKJ3 1502 aaKnown RBP28.58■■■□□ 2.16
CNIH4-206ENST00000468318 SAMD9LQ8IVG5 1584 aa28.56■■■□□ 2.16
CNIH4-206ENST00000468318 CCNB3Q8WWL7 1395 aa28.56■■■□□ 2.16
CNIH4-206ENST00000468318 ADGRL1O94910 1474 aa28.55■■■□□ 2.16
CNIH4-206ENST00000468318 ABCC1P33527 1531 aa28.52■■■□□ 2.16
CNIH4-206ENST00000468318 EFCAB2Q5VUJ9 269 aa28.48■■■□□ 2.15
CNIH4-206ENST00000468318 PHLDB1Q86UU1 1377 aa28.48■■■□□ 2.15
CNIH4-206ENST00000468318 SYCP2Q9BX26 1530 aa28.46■■■□□ 2.15
CNIH4-206ENST00000468318 DENND4BO75064 1496 aaPredicted RBP28.46■■■□□ 2.15
CNIH4-206ENST00000468318 ZNF777Q9ULD5 760 aaPredicted RBP28.45■■■□□ 2.15
CNIH4-206ENST00000468318 SCAPERQ9BY12 1400 aa28.45■■■□□ 2.14
CNIH4-206ENST00000468318 RAPGEF3O95398 923 aa28.44■■■□□ 2.14
CNIH4-206ENST00000468318 ARHGEF12Q9NZN5 1544 aa28.42■■■□□ 2.14
CNIH4-206ENST00000468318 POGZQ7Z3K3 1410 aa28.42■■■□□ 2.14
CNIH4-206ENST00000468318 CFDP1Q9UEE9 299 aaPredicted RBP28.42■■■□□ 2.14
CNIH4-206ENST00000468318 PPARGC1BQ86YN6 1023 aaKnown RBP28.41■■■□□ 2.14
CNIH4-206ENST00000468318 CAMSAP2Q08AD1 1489 aa28.39■■■□□ 2.13
CNIH4-206ENST00000468318 MYOM3Q5VTT5 1437 aa28.38■■■□□ 2.13
CNIH4-206ENST00000468318 ZMYM4Q5VZL5 1548 aa28.38■■■□□ 2.13
CNIH4-206ENST00000468318 KDM5CP41229 1560 aa28.35■■■□□ 2.13
CNIH4-206ENST00000468318 PTPN23Q9H3S7 1636 aa28.35■■■□□ 2.13
CNIH4-206ENST00000468318 HECW2Q9P2P5 1572 aa28.35■■■□□ 2.13
CNIH4-206ENST00000468318 ARHGEF40Q8TER5 1519 aa28.34■■■□□ 2.13
CNIH4-206ENST00000468318 ZNF644Q9H582 1327 aaPredicted RBP28.34■■■□□ 2.13
CNIH4-206ENST00000468318 ZNF518AQ6AHZ1 1483 aa28.34■■■□□ 2.13
CNIH4-206ENST00000468318 TRAPPC8Q9Y2L5 1435 aa28.34■■■□□ 2.13
CNIH4-206ENST00000468318 PLEKHH2Q8IVE3 1493 aa28.32■■■□□ 2.12
CNIH4-206ENST00000468318 ZFYVE16Q7Z3T8 1539 aa28.3■■■□□ 2.12
CNIH4-206ENST00000468318 KIDINS220Q9ULH0 1771 aa28.29■■■□□ 2.12
CNIH4-206ENST00000468318 ABCA6Q8N139 1617 aa28.28■■■□□ 2.12
CNIH4-206ENST00000468318 HNRNPMP52272 730 aaKnown RBP eCLIP28.28■■■□□ 2.12
CNIH4-206ENST00000468318 SIGLEC1Q9BZZ2 1709 aa28.27■■■□□ 2.12
CNIH4-206ENST00000468318 AFAP1Q8N556 730 aa28.26■■■□□ 2.11
CNIH4-206ENST00000468318 FGD6Q6ZV73 1430 aa28.25■■■□□ 2.11
CNIH4-206ENST00000468318 YEATS2Q9ULM3 1422 aa28.25■■■□□ 2.11
CNIH4-206ENST00000468318 INO80Q9ULG1 1556 aaPredicted RBP28.25■■■□□ 2.11
CNIH4-206ENST00000468318 CROCC2H7BZ55 1655 aa28.25■■■□□ 2.11
CNIH4-206ENST00000468318 MIA2Q96PC5 1412 aa28.25■■■□□ 2.11
CNIH4-206ENST00000468318 KIAA1107Q9UPP5 1409 aa28.25■■■□□ 2.11
CNIH4-206ENST00000468318 ARHGEF5Q12774 1597 aa28.23■■■□□ 2.11
CNIH4-206ENST00000468318 DIP2CQ9Y2E4 1556 aa28.22■■■□□ 2.11
CNIH4-206ENST00000468318 MBD5Q9P267 1494 aa28.22■■■□□ 2.11
CNIH4-206ENST00000468318 ATP7AQ04656 1500 aa28.2■■■□□ 2.1
CNIH4-206ENST00000468318 CCDC141Q6ZP82 1450 aa28.19■■■□□ 2.1
CNIH4-206ENST00000468318 MAGI2Q86UL8 1455 aa28.19■■■□□ 2.1
CNIH4-206ENST00000468318 MYT1LQ9UL68 1186 aa28.18■■■□□ 2.1
CNIH4-206ENST00000468318 ADGBQ8N7X0 1667 aa28.18■■■□□ 2.1
CNIH4-206ENST00000468318 TCOF1Q13428 1488 aaKnown RBP28.16■■■□□ 2.1
CNIH4-206ENST00000468318 DNMT1P26358 1616 aaKnown RBP28.16■■■□□ 2.1
CNIH4-206ENST00000468318 MLH3Q9UHC1 1453 aa28.16■■■□□ 2.1
CNIH4-206ENST00000468318 SPAG9O60271 1321 aaKnown RBP28.11■■■□□ 2.09
CNIH4-206ENST00000468318 MAST1Q9Y2H9 1570 aa28.08■■■□□ 2.09
CNIH4-206ENST00000468318 BCORL1Q5H9F3 1711 aa28.08■■■□□ 2.09
CNIH4-206ENST00000468318 ATP10AO60312 1499 aa28.08■■■□□ 2.09
CNIH4-206ENST00000468318 C9orf84Q5VXU9 1444 aa28.07■■■□□ 2.08
CNIH4-206ENST00000468318 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
CNIH4-206ENST00000468318 REREQ9P2R6 1566 aa28.04■■■□□ 2.08
CNIH4-206ENST00000468318 DAPK1P53355 1430 aa28.04■■■□□ 2.08
CNIH4-206ENST00000468318 ABCC5O15440 1437 aa28.02■■■□□ 2.08
CNIH4-206ENST00000468318 PLXNC1O60486 1568 aa28.01■■■□□ 2.08
CNIH4-206ENST00000468318 FER1L4A9Z1Z3 1794 aa28■■■□□ 2.07
CNIH4-206ENST00000468318 ARID4BQ4LE39 1312 aaPredicted RBP28■■■□□ 2.07
CNIH4-206ENST00000468318 SHANK2Q9UPX8 1470 aa27.99■■■□□ 2.07
CNIH4-206ENST00000468318 RTEL1-TNFRSF6BF6WH68 1400 aa27.98■■■□□ 2.07
CNIH4-206ENST00000468318 ADAMTSL3P82987 1691 aa27.98■■■□□ 2.07
CNIH4-206ENST00000468318 MADDQ8WXG6 1647 aa27.98■■■□□ 2.07
CNIH4-206ENST00000468318 RSPH4AQ5TD94 716 aa27.97■■■□□ 2.07
CNIH4-206ENST00000468318 RIMS1Q86UR5 1692 aaKnown RBP27.96■■■□□ 2.07
CNIH4-206ENST00000468318 A2MP01023 1474 aa27.95■■■□□ 2.07
CNIH4-206ENST00000468318 TSPY4P0CV99 314 aa27.95■■■□□ 2.06
CNIH4-206ENST00000468318 TSPY10P0CW01 314 aa27.95■■■□□ 2.06
CNIH4-206ENST00000468318 RRBP1Q9P2E9 1410 aaKnown RBP27.94■■■□□ 2.06
CNIH4-206ENST00000468318 AGLP35573 1532 aa27.9■■■□□ 2.06
CNIH4-206ENST00000468318 MLECQ14165 292 aa27.9■■■□□ 2.06
CNIH4-206ENST00000468318 KDM4FA0A1W2PPD8 638 aa27.89■■■□□ 2.06
CNIH4-206ENST00000468318 CHIC2Q9UKJ5 165 aa27.89■■■□□ 2.06
CNIH4-206ENST00000468318 ITGAEP38570 1179 aa27.87■■■□□ 2.05
CNIH4-206ENST00000468318 PTPRKQ15262 1439 aa27.87■■■□□ 2.05
CNIH4-206ENST00000468318 EIF2AK4Q9P2K8 1649 aaKnown RBP27.85■■■□□ 2.05
CNIH4-206ENST00000468318 ADGRL2O95490 1459 aa27.83■■■□□ 2.05
CNIH4-206ENST00000468318 DUOX2Q9NRD8 1548 aa27.83■■■□□ 2.05
CNIH4-206ENST00000468318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.82■■■□□ 2.047e-7■■■■■ 52.8
CNIH4-206ENST00000468318 CLTCQ00610 1675 aaKnown RBP27.82■■■□□ 2.04
CNIH4-206ENST00000468318 KIF15Q9NS87 1388 aa27.82■■■□□ 2.04
CNIH4-206ENST00000468318 DHX29Q7Z478 1369 aaKnown RBP27.81■■■□□ 2.04
CNIH4-206ENST00000468318 RRP7BPQ9NSQ0 103 aa27.79■■■□□ 2.04
CNIH4-206ENST00000468318 ANKRD30AQ9BXX3 1397 aa27.79■■■□□ 2.04
CNIH4-206ENST00000468318 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
CNIH4-206ENST00000468318 NCOA1Q15788 1441 aa27.76■■■□□ 2.03
CNIH4-206ENST00000468318 CEP152O94986 1710 aa27.76■■■□□ 2.03
CNIH4-206ENST00000468318 C3P01024 1663 aa27.74■■■□□ 2.03
CNIH4-206ENST00000468318 GCC2Q8IWJ2 1684 aa27.74■■■□□ 2.03
CNIH4-206ENST00000468318 MROH1Q8NDA8 1641 aa27.74■■■□□ 2.03
CNIH4-206ENST00000468318 MROH2AA6NES4 1674 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms