RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SCAPERQ9BY12 1400 aa27.46■■□□□ 1.99
SSBP1-207ENST00000468267 ARHGAP5Q13017 1502 aa27.43■■□□□ 1.98
SSBP1-207ENST00000468267 ZMYM4Q5VZL5 1548 aa27.42■■□□□ 1.98
SSBP1-207ENST00000468267 CDC42BPBQ9Y5S2 1711 aa27.42■■□□□ 1.98
SSBP1-207ENST00000468267 POGZQ7Z3K3 1410 aa27.41■■□□□ 1.98
SSBP1-207ENST00000468267 ARHGEF40Q8TER5 1519 aa27.4■■□□□ 1.98
SSBP1-207ENST00000468267 PREX2Q70Z35 1606 aa27.38■■□□□ 1.97
SSBP1-207ENST00000468267 MAGI2Q86UL8 1455 aa27.37■■□□□ 1.97
SSBP1-207ENST00000468267 CDC42BPAQ5VT25 1732 aa27.35■■□□□ 1.97
SSBP1-207ENST00000468267 ZFYVE16Q7Z3T8 1539 aa27.34■■□□□ 1.97
SSBP1-207ENST00000468267 YEATS2Q9ULM3 1422 aa27.33■■□□□ 1.96
SSBP1-207ENST00000468267 ARID4BQ4LE39 1312 aaPredicted RBP27.32■■□□□ 1.96
SSBP1-207ENST00000468267 MTUS2Q5JR59 1369 aa27.31■■□□□ 1.96
SSBP1-207ENST00000468267 ZNF518AQ6AHZ1 1483 aa27.3■■□□□ 1.96
SSBP1-207ENST00000468267 ADAMTSL3P82987 1691 aa27.3■■□□□ 1.96
SSBP1-207ENST00000468267 BCORL1Q5H9F3 1711 aa27.29■■□□□ 1.96
SSBP1-207ENST00000468267 AFAP1Q8N556 730 aa27.28■■□□□ 1.96
SSBP1-207ENST00000468267 GPATCH8Q9UKJ3 1502 aaKnown RBP27.27■■□□□ 1.96
SSBP1-207ENST00000468267 KDM5CP41229 1560 aa27.26■■□□□ 1.95
SSBP1-207ENST00000468267 ABCC1P33527 1531 aa27.25■■□□□ 1.95
SSBP1-207ENST00000468267 ARHGEF12Q9NZN5 1544 aa27.24■■□□□ 1.95
SSBP1-207ENST00000468267 EHBP1L1Q8N3D4 1523 aa27.22■■□□□ 1.95
SSBP1-207ENST00000468267 SIGLEC1Q9BZZ2 1709 aa27.22■■□□□ 1.95
SSBP1-207ENST00000468267 ITSN2Q9NZM3 1697 aa27.22■■□□□ 1.95
SSBP1-207ENST00000468267 ATP10AO60312 1499 aa27.22■■□□□ 1.95
SSBP1-207ENST00000468267 VPS8Q8N3P4 1428 aa27.22■■□□□ 1.95
SSBP1-207ENST00000468267 CCNB3Q8WWL7 1395 aa27.22■■□□□ 1.95
SSBP1-207ENST00000468267 TRAPPC8Q9Y2L5 1435 aa27.21■■□□□ 1.95
SSBP1-207ENST00000468267 ZNF777Q9ULD5 760 aaPredicted RBP27.2■■□□□ 1.94
SSBP1-207ENST00000468267 CFDP1Q9UEE9 299 aaPredicted RBP27.19■■□□□ 1.94
SSBP1-207ENST00000468267 SAMD9LQ8IVG5 1584 aa27.18■■□□□ 1.94
SSBP1-207ENST00000468267 MADDQ8WXG6 1647 aa27.18■■□□□ 1.94
SSBP1-207ENST00000468267 PTPRMP28827 1452 aa27.18■■□□□ 1.94
SSBP1-207ENST00000468267 HECW2Q9P2P5 1572 aa27.18■■□□□ 1.94
SSBP1-207ENST00000468267 C9orf84Q5VXU9 1444 aa27.17■■□□□ 1.94
SSBP1-207ENST00000468267 MLH3Q9UHC1 1453 aa27.17■■□□□ 1.94
SSBP1-207ENST00000468267 MYT1LQ9UL68 1186 aa27.16■■□□□ 1.94
SSBP1-207ENST00000468267 TIAM1Q13009 1591 aa27.14■■□□□ 1.94
SSBP1-207ENST00000468267 HNRNPMP52272 730 aaKnown RBP eCLIP27.12■■□□□ 1.93
SSBP1-207ENST00000468267 KIAA1107Q9UPP5 1409 aa27.12■■□□□ 1.93
SSBP1-207ENST00000468267 PLEKHH2Q8IVE3 1493 aa27.12■■□□□ 1.93
SSBP1-207ENST00000468267 SYCP2Q9BX26 1530 aa27.11■■□□□ 1.93
SSBP1-207ENST00000468267 DIP2CQ9Y2E4 1556 aa27.11■■□□□ 1.93
SSBP1-207ENST00000468267 RIMS1Q86UR5 1692 aaKnown RBP27.1■■□□□ 1.93
SSBP1-207ENST00000468267 ABCA6Q8N139 1617 aa27.09■■□□□ 1.93
SSBP1-207ENST00000468267 MLECQ14165 292 aa27.09■■□□□ 1.93
SSBP1-207ENST00000468267 SUPT6HQ7KZ85 1726 aaKnown RBP27.09■■□□□ 1.93
SSBP1-207ENST00000468267 KIDINS220Q9ULH0 1771 aa27.09■■□□□ 1.93
SSBP1-207ENST00000468267 NCOA2Q15596 1464 aa27.07■■□□□ 1.92
SSBP1-207ENST00000468267 REREQ9P2R6 1566 aa27.07■■□□□ 1.92
SSBP1-207ENST00000468267 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
SSBP1-207ENST00000468267 ZNF644Q9H582 1327 aaPredicted RBP27.05■■□□□ 1.92
SSBP1-207ENST00000468267 LRRC9Q6ZRR7 1453 aa27.05■■□□□ 1.92
SSBP1-207ENST00000468267 SPAG9O60271 1321 aaKnown RBP27.04■■□□□ 1.92
SSBP1-207ENST00000468267 FER1L4A9Z1Z3 1794 aa27.03■■□□□ 1.92
SSBP1-207ENST00000468267 KANK4Q5T7N3 995 aaPredicted RBP26.99■■□□□ 1.91
SSBP1-207ENST00000468267 AGLP35573 1532 aa26.99■■□□□ 1.91
SSBP1-207ENST00000468267 MBD5Q9P267 1494 aa26.98■■□□□ 1.91
SSBP1-207ENST00000468267 ATP7AQ04656 1500 aa26.96■■□□□ 1.91
SSBP1-207ENST00000468267 INO80Q9ULG1 1556 aaPredicted RBP26.96■■□□□ 1.91
SSBP1-207ENST00000468267 PLPPR3Q6T4P5 718 aa26.92■■□□□ 1.9
SSBP1-207ENST00000468267 CAMSAP2Q08AD1 1489 aa26.91■■□□□ 1.9
SSBP1-207ENST00000468267 APLP2Q06481 763 aa26.9■■□□□ 1.9
SSBP1-207ENST00000468267 RSPH4AQ5TD94 716 aa26.88■■□□□ 1.89
SSBP1-207ENST00000468267 RTEL1-TNFRSF6BF6WH68 1400 aa26.87■■□□□ 1.89
SSBP1-207ENST00000468267 A2MP01023 1474 aa26.86■■□□□ 1.89
SSBP1-207ENST00000468267 CCDC141Q6ZP82 1450 aa26.86■■□□□ 1.89
SSBP1-207ENST00000468267 LMTK3Q96Q04 1460 aa26.85■■□□□ 1.89
SSBP1-207ENST00000468267 PLXNC1O60486 1568 aa26.84■■□□□ 1.89
SSBP1-207ENST00000468267 CEBPAP49715 358 aaPredicted RBP26.84■■□□□ 1.89
SSBP1-207ENST00000468267 ADGBQ8N7X0 1667 aa26.84■■□□□ 1.89
SSBP1-207ENST00000468267 ESF1Q9H501 851 aaKnown RBP26.83■■□□□ 1.89
SSBP1-207ENST00000468267 MYOM3Q5VTT5 1437 aa26.82■■□□□ 1.88
SSBP1-207ENST00000468267 ARHGEF5Q12774 1597 aa26.82■■□□□ 1.88
SSBP1-207ENST00000468267 SETD1BQ9UPS6 1966 aaKnown RBP26.81■■□□□ 1.88
SSBP1-207ENST00000468267 MIA2Q96PC5 1412 aa26.81■■□□□ 1.88
SSBP1-207ENST00000468267 CNTLNQ9NXG0 1405 aa26.78■■□□□ 1.88
SSBP1-207ENST00000468267 C3P01024 1663 aa26.77■■□□□ 1.88
SSBP1-207ENST00000468267 DHX29Q7Z478 1369 aaKnown RBP26.76■■□□□ 1.87
SSBP1-207ENST00000468267 TSPY4P0CV99 314 aa26.76■■□□□ 1.87
SSBP1-207ENST00000468267 TSPY10P0CW01 314 aa26.76■■□□□ 1.87
SSBP1-207ENST00000468267 PREX1Q8TCU6 1659 aa26.73■■□□□ 1.87
SSBP1-207ENST00000468267 HSPA2P54652 639 aa26.72■■□□□ 1.87
SSBP1-207ENST00000468267 GGT6Q6P531 493 aa26.72■■□□□ 1.87
SSBP1-207ENST00000468267 MROH2AA6NES4 1674 aa26.71■■□□□ 1.87
SSBP1-207ENST00000468267 PPP6R1Q9UPN7 881 aa26.7■■□□□ 1.86
SSBP1-207ENST00000468267 MAST1Q9Y2H9 1570 aa26.68■■□□□ 1.86
SSBP1-207ENST00000468267 ZMYM3Q14202 1370 aa26.68■■□□□ 1.86
SSBP1-207ENST00000468267 CLTCQ00610 1675 aaKnown RBP26.67■■□□□ 1.86
SSBP1-207ENST00000468267 PTPN23Q9H3S7 1636 aa26.65■■□□□ 1.86
SSBP1-207ENST00000468267 KIF3BO15066 747 aa26.65■■□□□ 1.86
SSBP1-207ENST00000468267 UHRF1BP1Q6BDS2 1440 aa26.65■■□□□ 1.86
SSBP1-207ENST00000468267 FGD6Q6ZV73 1430 aa26.64■■□□□ 1.85
SSBP1-207ENST00000468267 NPATQ14207 1427 aa26.61■■□□□ 1.85
SSBP1-207ENST00000468267 TCOF1Q13428 1488 aaKnown RBP26.59■■□□□ 1.85
SSBP1-207ENST00000468267 ABCC5O15440 1437 aa26.58■■□□□ 1.85
SSBP1-207ENST00000468267 CROCC2H7BZ55 1655 aa26.56■■□□□ 1.84
SSBP1-207ENST00000468267 PTPRKQ15262 1439 aa26.55■■□□□ 1.84
SSBP1-207ENST00000468267 SHANK2Q9UPX8 1470 aa26.55■■□□□ 1.84
SSBP1-207ENST00000468267 FAM135AQ9P2D6 1515 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms