RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 DOK7Q18PE1 504 aa12.74□□□□□ -0.37
RBM39-226ENST00000468086 FAM205CA6NFA0 338 aa12.73□□□□□ -0.37
RBM39-226ENST00000468086 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
RBM39-226ENST00000468086 HS3ST6Q96QI5 342 aa12.72□□□□□ -0.37
RBM39-226ENST00000468086 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
RBM39-226ENST00000468086 MFRPQ9BY79 579 aa12.7□□□□□ -0.38
RBM39-226ENST00000468086 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
RBM39-226ENST00000468086 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
RBM39-226ENST00000468086 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
RBM39-226ENST00000468086 POTEB3A0JP26 581 aa12.67□□□□□ -0.38
RBM39-226ENST00000468086 POTEBQ6S5H4 581 aa12.67□□□□□ -0.38
RBM39-226ENST00000468086 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
RBM39-226ENST00000468086 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
RBM39-226ENST00000468086 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
RBM39-226ENST00000468086 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
RBM39-226ENST00000468086 ERBB3P21860 1342 aa12.61□□□□□ -0.39
RBM39-226ENST00000468086 KRTAP3-3Q9BYR6 98 aa12.6□□□□□ -0.39
RBM39-226ENST00000468086 KRTAP3-2Q9BYR7 98 aa12.6□□□□□ -0.39
RBM39-226ENST00000468086 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
RBM39-226ENST00000468086 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.55□□□□□ -0.4
RBM39-226ENST00000468086 GTPBP6O43824 516 aaPredicted RBP12.52□□□□□ -0.41
RBM39-226ENST00000468086 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.41
RBM39-226ENST00000468086 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
RBM39-226ENST00000468086 PPP1R37O75864 691 aa12.49□□□□□ -0.41
RBM39-226ENST00000468086 KIF3CO14782 793 aa12.47□□□□□ -0.41
RBM39-226ENST00000468086 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
RBM39-226ENST00000468086 C2orf72A6NCS6 295 aa12.46□□□□□ -0.41
RBM39-226ENST00000468086 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
RBM39-226ENST00000468086 ZNF687Q8N1G0 1237 aa12.42□□□□□ -0.42
RBM39-226ENST00000468086 TMC2Q8TDI7 906 aa12.42□□□□□ -0.42
RBM39-226ENST00000468086 KHSRPQ92945 711 aaKnown RBP eCLIP12.41□□□□□ -0.426e-9■■□□□ 11.4
RBM39-226ENST00000468086 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
RBM39-226ENST00000468086 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
RBM39-226ENST00000468086 SLC34A2O95436 690 aa12.35□□□□□ -0.43
RBM39-226ENST00000468086 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
RBM39-226ENST00000468086 NUDT7P0C024 238 aa12.33□□□□□ -0.44
RBM39-226ENST00000468086 PCDHGA4Q9Y5G9 962 aa12.32□□□□□ -0.44
RBM39-226ENST00000468086 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
RBM39-226ENST00000468086 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
RBM39-226ENST00000468086 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
RBM39-226ENST00000468086 PDE4AP27815 886 aa12.26□□□□□ -0.45
RBM39-226ENST00000468086 LHX6Q9UPM6 363 aa12.26□□□□□ -0.45
RBM39-226ENST00000468086 PTGER2P43116 358 aa12.25□□□□□ -0.45
RBM39-226ENST00000468086 ANKRD13DQ6ZTN6 518 aa12.25□□□□□ -0.45
RBM39-226ENST00000468086 CRISPLD2Q9H0B8 497 aa12.24□□□□□ -0.45
RBM39-226ENST00000468086 FOXK1P85037 733 aa12.23□□□□□ -0.45
RBM39-226ENST00000468086 PLCB2Q00722 1185 aa12.23□□□□□ -0.45
RBM39-226ENST00000468086 PBX2P40425 430 aa12.22□□□□□ -0.45
RBM39-226ENST00000468086 LSM11P83369 360 aaKnown RBP eCLIP12.22□□□□□ -0.45
RBM39-226ENST00000468086 DSG2Q14126 1118 aa12.21□□□□□ -0.45
RBM39-226ENST00000468086 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
RBM39-226ENST00000468086 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
RBM39-226ENST00000468086 PTCD2Q8WV60 388 aaKnown RBP12.2□□□□□ -0.46
RBM39-226ENST00000468086 CADPS2Q86UW7 1296 aa12.18□□□□□ -0.46
RBM39-226ENST00000468086 PSDA5PKW4 1024 aaPredicted RBP12.17□□□□□ -0.46
RBM39-226ENST00000468086 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
RBM39-226ENST00000468086 MFSD10Q14728 455 aa12.15□□□□□ -0.46
RBM39-226ENST00000468086 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
RBM39-226ENST00000468086 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
RBM39-226ENST00000468086 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
RBM39-226ENST00000468086 TBC1D12O60347 775 aa12.14□□□□□ -0.47
RBM39-226ENST00000468086 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
RBM39-226ENST00000468086 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
RBM39-226ENST00000468086 ARHGAP33O14559 1287 aa12.1□□□□□ -0.47
RBM39-226ENST00000468086 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
RBM39-226ENST00000468086 PPP4R3BQ5MIZ7 849 aa12.07□□□□□ -0.48
RBM39-226ENST00000468086 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
RBM39-226ENST00000468086 OXER1Q8TDS5 423 aa12.05□□□□□ -0.48
RBM39-226ENST00000468086 ADGRD1Q6QNK2 874 aa12.04□□□□□ -0.48
RBM39-226ENST00000468086 WDR70Q9NW82 654 aa12.04□□□□□ -0.48
RBM39-226ENST00000468086 PSEN2P49810 448 aa12.01□□□□□ -0.49
RBM39-226ENST00000468086 CAMK2BQ13554 666 aa12.01□□□□□ -0.49
RBM39-226ENST00000468086 TK2O00142 265 aa12□□□□□ -0.49
RBM39-226ENST00000468086 HAP1P54257 671 aaPredicted RBP11.99□□□□□ -0.49
RBM39-226ENST00000468086 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
RBM39-226ENST00000468086 KCNH8Q96L42 1107 aa11.99□□□□□ -0.49
RBM39-226ENST00000468086 KCNK17Q96T54 332 aa11.96□□□□□ -0.49
RBM39-226ENST00000468086 E2F4Q16254 413 aa11.95□□□□□ -0.5
RBM39-226ENST00000468086 ZNF454Q8N9F8 522 aa11.95□□□□□ -0.5
RBM39-226ENST00000468086 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
RBM39-226ENST00000468086 HRO43593 1189 aa11.93□□□□□ -0.5
RBM39-226ENST00000468086 HCSTQ9UBK5 93 aa11.93□□□□□ -0.5
RBM39-226ENST00000468086 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
RBM39-226ENST00000468086 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
RBM39-226ENST00000468086 ARIH1Q9Y4X5 557 aaPredicted RBP11.91□□□□□ -0.5
RBM39-226ENST00000468086 VSIG10Q8N0Z9 540 aa11.9□□□□□ -0.5
RBM39-226ENST00000468086 EVI5O60447 810 aa11.89□□□□□ -0.51
RBM39-226ENST00000468086 BCL2L12Q9HB09 334 aa11.89□□□□□ -0.51
RBM39-226ENST00000468086 FOSBP53539 338 aa11.88□□□□□ -0.51
RBM39-226ENST00000468086 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
RBM39-226ENST00000468086 JPH4Q96JJ6 628 aa11.86□□□□□ -0.51
RBM39-226ENST00000468086 PTPREP23469 700 aa11.85□□□□□ -0.51
RBM39-226ENST00000468086 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
RBM39-226ENST00000468086 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
RBM39-226ENST00000468086 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
RBM39-226ENST00000468086 DPYSL4O14531 572 aa11.83□□□□□ -0.52
RBM39-226ENST00000468086 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
RBM39-226ENST00000468086 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
RBM39-226ENST00000468086 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
RBM39-226ENST00000468086 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms