RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
SNIP1-202ENST00000468040 CFAP74Q9C0B2 1584 aa23.49■■□□□ 1.35
SNIP1-202ENST00000468040 CDC42BPBQ9Y5S2 1711 aa23.49■■□□□ 1.35
SNIP1-202ENST00000468040 FANCAO15360 1455 aa23.49■■□□□ 1.35
SNIP1-202ENST00000468040 CFDP1Q9UEE9 299 aaPredicted RBP23.48■■□□□ 1.35
SNIP1-202ENST00000468040 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
SNIP1-202ENST00000468040 EFCAB2Q5VUJ9 269 aa23.47■■□□□ 1.35
SNIP1-202ENST00000468040 NEO1Q92859 1461 aa23.47■■□□□ 1.35
SNIP1-202ENST00000468040 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
SNIP1-202ENST00000468040 AKNAQ7Z591 1439 aa23.41■■□□□ 1.34
SNIP1-202ENST00000468040 FGD6Q6ZV73 1430 aa23.4■■□□□ 1.34
SNIP1-202ENST00000468040 PLEKHH2Q8IVE3 1493 aa23.38■■□□□ 1.33
SNIP1-202ENST00000468040 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
SNIP1-202ENST00000468040 SAMD9LQ8IVG5 1584 aa23.38■■□□□ 1.33
SNIP1-202ENST00000468040 ADGRL1O94910 1474 aa23.36■■□□□ 1.33
SNIP1-202ENST00000468040 ABCC1P33527 1531 aa23.36■■□□□ 1.33
SNIP1-202ENST00000468040 PTPN23Q9H3S7 1636 aa23.35■■□□□ 1.33
SNIP1-202ENST00000468040 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
SNIP1-202ENST00000468040 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
SNIP1-202ENST00000468040 TCOF1Q13428 1488 aaKnown RBP23.32■■□□□ 1.32
SNIP1-202ENST00000468040 SCAPERQ9BY12 1400 aa23.32■■□□□ 1.32
SNIP1-202ENST00000468040 ZNF644Q9H582 1327 aaPredicted RBP23.32■■□□□ 1.32
SNIP1-202ENST00000468040 SYCP2Q9BX26 1530 aa23.3■■□□□ 1.32
SNIP1-202ENST00000468040 RRBP1Q9P2E9 1410 aaKnown RBP23.3■■□□□ 1.32
SNIP1-202ENST00000468040 DENND4BO75064 1496 aaPredicted RBP23.3■■□□□ 1.32
SNIP1-202ENST00000468040 KDM6BO15054 1643 aa23.29■■□□□ 1.32
SNIP1-202ENST00000468040 ARHGEF12Q9NZN5 1544 aa23.27■■□□□ 1.32
SNIP1-202ENST00000468040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.31
SNIP1-202ENST00000468040 POGZQ7Z3K3 1410 aa23.26■■□□□ 1.31
SNIP1-202ENST00000468040 ZNF518AQ6AHZ1 1483 aa23.25■■□□□ 1.31
SNIP1-202ENST00000468040 MBD5Q9P267 1494 aa23.25■■□□□ 1.31
SNIP1-202ENST00000468040 HNRNPMP52272 730 aaKnown RBP eCLIP23.25■■□□□ 1.31
SNIP1-202ENST00000468040 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
SNIP1-202ENST00000468040 RSPH4AQ5TD94 716 aa23.25■■□□□ 1.31
SNIP1-202ENST00000468040 ARHGEF5Q12774 1597 aa23.25■■□□□ 1.31
SNIP1-202ENST00000468040 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
SNIP1-202ENST00000468040 RICTORQ6R327 1708 aa23.23■■□□□ 1.31
SNIP1-202ENST00000468040 CCDC141Q6ZP82 1450 aa23.23■■□□□ 1.31
SNIP1-202ENST00000468040 TRAPPC8Q9Y2L5 1435 aa23.22■■□□□ 1.31
SNIP1-202ENST00000468040 RAPGEF3O95398 923 aa23.21■■□□□ 1.31
SNIP1-202ENST00000468040 FRMPD1Q5SYB0 1578 aa23.21■■□□□ 1.31
SNIP1-202ENST00000468040 KDM5CP41229 1560 aa23.2■■□□□ 1.3
SNIP1-202ENST00000468040 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
SNIP1-202ENST00000468040 AFAP1Q8N556 730 aa23.19■■□□□ 1.3
SNIP1-202ENST00000468040 ZMYM4Q5VZL5 1548 aa23.18■■□□□ 1.3
SNIP1-202ENST00000468040 DAPK1P53355 1430 aa23.16■■□□□ 1.3
SNIP1-202ENST00000468040 ABCC5O15440 1437 aa23.16■■□□□ 1.3
SNIP1-202ENST00000468040 TSPY4P0CV99 314 aa23.15■■□□□ 1.3
SNIP1-202ENST00000468040 TSPY10P0CW01 314 aa23.15■■□□□ 1.3
SNIP1-202ENST00000468040 CROCC2H7BZ55 1655 aa23.14■■□□□ 1.29
SNIP1-202ENST00000468040 MAGI2Q86UL8 1455 aa23.14■■□□□ 1.29
SNIP1-202ENST00000468040 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.29
SNIP1-202ENST00000468040 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.29
SNIP1-202ENST00000468040 SPAG9O60271 1321 aaKnown RBP23.13■■□□□ 1.29
SNIP1-202ENST00000468040 MLH3Q9UHC1 1453 aa23.13■■□□□ 1.29
SNIP1-202ENST00000468040 MAST1Q9Y2H9 1570 aa23.11■■□□□ 1.29
SNIP1-202ENST00000468040 RTEL1-TNFRSF6BF6WH68 1400 aa23.11■■□□□ 1.29
SNIP1-202ENST00000468040 INO80Q9ULG1 1556 aaPredicted RBP23.1■■□□□ 1.29
SNIP1-202ENST00000468040 C9orf84Q5VXU9 1444 aa23.1■■□□□ 1.29
SNIP1-202ENST00000468040 ZFYVE16Q7Z3T8 1539 aa23.1■■□□□ 1.29
SNIP1-202ENST00000468040 ATP7AQ04656 1500 aa23.09■■□□□ 1.29
SNIP1-202ENST00000468040 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
SNIP1-202ENST00000468040 KIDINS220Q9ULH0 1771 aa23.06■■□□□ 1.28
SNIP1-202ENST00000468040 ITGAEP38570 1179 aa23.06■■□□□ 1.28
SNIP1-202ENST00000468040 ARHGEF40Q8TER5 1519 aa23.05■■□□□ 1.28
SNIP1-202ENST00000468040 PLXNC1O60486 1568 aa23.03■■□□□ 1.28
SNIP1-202ENST00000468040 PTPRKQ15262 1439 aa23.03■■□□□ 1.28
SNIP1-202ENST00000468040 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
SNIP1-202ENST00000468040 ADGBQ8N7X0 1667 aa23.03■■□□□ 1.28
SNIP1-202ENST00000468040 ANKRD30AQ9BXX3 1397 aa23.02■■□□□ 1.28
SNIP1-202ENST00000468040 YEATS2Q9ULM3 1422 aa23.02■■□□□ 1.28
SNIP1-202ENST00000468040 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
SNIP1-202ENST00000468040 ABCA6Q8N139 1617 aa23.01■■□□□ 1.27
SNIP1-202ENST00000468040 DIP2CQ9Y2E4 1556 aa23.01■■□□□ 1.27
SNIP1-202ENST00000468040 CHIC2Q9UKJ5 165 aa23■■□□□ 1.27
SNIP1-202ENST00000468040 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
SNIP1-202ENST00000468040 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
SNIP1-202ENST00000468040 ATP10AO60312 1499 aa22.98■■□□□ 1.27
SNIP1-202ENST00000468040 KIF15Q9NS87 1388 aa22.96■■□□□ 1.27
SNIP1-202ENST00000468040 REREQ9P2R6 1566 aa22.96■■□□□ 1.27
SNIP1-202ENST00000468040 A2MP01023 1474 aa22.94■■□□□ 1.26
SNIP1-202ENST00000468040 RRP7BPQ9NSQ0 103 aa22.94■■□□□ 1.26
SNIP1-202ENST00000468040 DUOX2Q9NRD8 1548 aa22.93■■□□□ 1.26
SNIP1-202ENST00000468040 DHX29Q7Z478 1369 aaKnown RBP22.91■■□□□ 1.26
SNIP1-202ENST00000468040 HFM1A2PYH4 1435 aa22.89■■□□□ 1.25
SNIP1-202ENST00000468040 ERBINQ96RT1 1412 aa22.89■■□□□ 1.25
SNIP1-202ENST00000468040 AGLP35573 1532 aa22.87■■□□□ 1.25
SNIP1-202ENST00000468040 ANKRD50Q9ULJ7 1429 aa22.86■■□□□ 1.25
SNIP1-202ENST00000468040 GCC2Q8IWJ2 1684 aa22.86■■□□□ 1.25
SNIP1-202ENST00000468040 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
SNIP1-202ENST00000468040 NAIPQ13075 1403 aa22.85■■□□□ 1.25
SNIP1-202ENST00000468040 BCORL1Q5H9F3 1711 aa22.82■■□□□ 1.24
SNIP1-202ENST00000468040 SIGLEC1Q9BZZ2 1709 aa22.82■■□□□ 1.24
SNIP1-202ENST00000468040 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
SNIP1-202ENST00000468040 KIF3BO15066 747 aa22.79■■□□□ 1.24
SNIP1-202ENST00000468040 SETD5Q9C0A6 1442 aa22.77■■□□□ 1.24
SNIP1-202ENST00000468040 RNF17Q9BXT8 1623 aaKnown RBP22.76■■□□□ 1.23
SNIP1-202ENST00000468040 DEPDC5O75140 1603 aa22.73■■□□□ 1.23
SNIP1-202ENST00000468040 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
SNIP1-202ENST00000468040 GGT6Q6P531 493 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms