RNA–Protein interactions for RNA: ENST00000467911.1

NCK1-203, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-203ENST00000467911 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
NCK1-203ENST00000467911 ZNF687Q8N1G0 1237 aa12.79□□□□□ -0.36
NCK1-203ENST00000467911 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
NCK1-203ENST00000467911 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
NCK1-203ENST00000467911 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
NCK1-203ENST00000467911 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
NCK1-203ENST00000467911 VGFO15240 615 aaPredicted RBP12.72□□□□□ -0.37
NCK1-203ENST00000467911 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
NCK1-203ENST00000467911 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
NCK1-203ENST00000467911 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
NCK1-203ENST00000467911 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
NCK1-203ENST00000467911 NLRP6P59044 892 aa12.62□□□□□ -0.39
NCK1-203ENST00000467911 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
NCK1-203ENST00000467911 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
NCK1-203ENST00000467911 KIF3CO14782 793 aa12.59□□□□□ -0.39
NCK1-203ENST00000467911 LSM11P83369 360 aaKnown RBP eCLIP12.58□□□□□ -0.4
NCK1-203ENST00000467911 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
NCK1-203ENST00000467911 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
NCK1-203ENST00000467911 NUDT7P0C024 238 aa12.56□□□□□ -0.4
NCK1-203ENST00000467911 PTGER2P43116 358 aa12.56□□□□□ -0.4
NCK1-203ENST00000467911 STK24Q9Y6E0 443 aa12.56□□□□□ -0.4
NCK1-203ENST00000467911 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
NCK1-203ENST00000467911 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
NCK1-203ENST00000467911 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
NCK1-203ENST00000467911 PCDHGA4Q9Y5G9 962 aa12.48□□□□□ -0.41
NCK1-203ENST00000467911 STK25O00506 426 aa12.47□□□□□ -0.41
NCK1-203ENST00000467911 SLC34A2O95436 690 aa12.43□□□□□ -0.42
NCK1-203ENST00000467911 PBX2P40425 430 aa12.43□□□□□ -0.42
NCK1-203ENST00000467911 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
NCK1-203ENST00000467911 PPP1R37O75864 691 aa12.4□□□□□ -0.42
NCK1-203ENST00000467911 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
NCK1-203ENST00000467911 RGL2O15211 777 aa12.37□□□□□ -0.43
NCK1-203ENST00000467911 TMC2Q8TDI7 906 aa12.37□□□□□ -0.43
NCK1-203ENST00000467911 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
NCK1-203ENST00000467911 PLA2G2EQ9NZK7 142 aa12.35□□□□□ -0.43
NCK1-203ENST00000467911 ADGRD1Q6QNK2 874 aa12.34□□□□□ -0.43
NCK1-203ENST00000467911 PKD2Q13563 968 aa12.32□□□□□ -0.44
NCK1-203ENST00000467911 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
NCK1-203ENST00000467911 DMRTA1Q5VZB9 504 aa12.31□□□□□ -0.44
NCK1-203ENST00000467911 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
NCK1-203ENST00000467911 PSEN2P49810 448 aa12.29□□□□□ -0.44
NCK1-203ENST00000467911 HRO43593 1189 aa12.26□□□□□ -0.45
NCK1-203ENST00000467911 PTCD2Q8WV60 388 aaKnown RBP12.26□□□□□ -0.45
NCK1-203ENST00000467911 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.45
NCK1-203ENST00000467911 TK2O00142 265 aa12.21□□□□□ -0.45
NCK1-203ENST00000467911 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
NCK1-203ENST00000467911 FOXK1P85037 733 aa12.2□□□□□ -0.46
NCK1-203ENST00000467911 DSG2Q14126 1118 aa12.18□□□□□ -0.46
NCK1-203ENST00000467911 KCTD12Q96CX2 325 aaKnown RBP12.18□□□□□ -0.46
NCK1-203ENST00000467911 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
NCK1-203ENST00000467911 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
NCK1-203ENST00000467911 KCNK17Q96T54 332 aa12.13□□□□□ -0.47
NCK1-203ENST00000467911 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
NCK1-203ENST00000467911 TBC1D12O60347 775 aa12.05□□□□□ -0.48
NCK1-203ENST00000467911 PTPN5P54829 565 aa12.05□□□□□ -0.48
NCK1-203ENST00000467911 OXER1Q8TDS5 423 aa12.05□□□□□ -0.48
NCK1-203ENST00000467911 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
NCK1-203ENST00000467911 UPF1Q92900 1129 aaKnown RBP eCLIP12.04□□□□□ -0.48
NCK1-203ENST00000467911 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
NCK1-203ENST00000467911 ZNF454Q8N9F8 522 aa12.02□□□□□ -0.49
NCK1-203ENST00000467911 SLC24A1O60721 1099 aa12□□□□□ -0.49
NCK1-203ENST00000467911 NKX1-1Q15270 411 aaPredicted RBP12□□□□□ -0.49
NCK1-203ENST00000467911 BHMG1C9JSJ3 638 aaPredicted RBP11.98□□□□□ -0.49
NCK1-203ENST00000467911 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
NCK1-203ENST00000467911 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
NCK1-203ENST00000467911 CRISPLD2Q9H0B8 497 aa11.96□□□□□ -0.49
NCK1-203ENST00000467911 FOSBP53539 338 aa11.95□□□□□ -0.5
NCK1-203ENST00000467911 THSD4Q6ZMP0 1018 aa11.95□□□□□ -0.5
NCK1-203ENST00000467911 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
NCK1-203ENST00000467911 SLC4A5Q9BY07 1137 aa11.94□□□□□ -0.5
NCK1-203ENST00000467911 ZBED2Q9BTP6 218 aa11.93□□□□□ -0.5
NCK1-203ENST00000467911 PPP1R15BQ5SWA1 713 aa11.92□□□□□ -0.5
NCK1-203ENST00000467911 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
NCK1-203ENST00000467911 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
NCK1-203ENST00000467911 PTPREP23469 700 aa11.89□□□□□ -0.51
NCK1-203ENST00000467911 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
NCK1-203ENST00000467911 WNT2BQ93097 391 aa11.88□□□□□ -0.51
NCK1-203ENST00000467911 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
NCK1-203ENST00000467911 A0A0G2JS52 829 aa11.86□□□□□ -0.51
NCK1-203ENST00000467911 EVI5O60447 810 aa11.85□□□□□ -0.51
NCK1-203ENST00000467911 MRPL50Q8N5N7 158 aaKnown RBP11.85□□□□□ -0.51
NCK1-203ENST00000467911 JPH4Q96JJ6 628 aa11.85□□□□□ -0.51
NCK1-203ENST00000467911 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
NCK1-203ENST00000467911 GOLGA8CPA6NN73 597 aa11.83□□□□□ -0.52
NCK1-203ENST00000467911 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
NCK1-203ENST00000467911 RGS20O76081 388 aa11.82□□□□□ -0.52
NCK1-203ENST00000467911 IRX2Q9BZI1 471 aaPredicted RBP11.82□□□□□ -0.52
NCK1-203ENST00000467911 PDE4AP27815 886 aa11.78□□□□□ -0.52
NCK1-203ENST00000467911 PROX2Q3B8N5 592 aa11.78□□□□□ -0.52
NCK1-203ENST00000467911 COL9A1P20849 921 aa11.76□□□□□ -0.53
NCK1-203ENST00000467911 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
NCK1-203ENST00000467911 NBPF3Q9H094 633 aa11.76□□□□□ -0.53
NCK1-203ENST00000467911 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
NCK1-203ENST00000467911 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
NCK1-203ENST00000467911 DDX27Q96GQ7 796 aaKnown RBP11.73□□□□□ -0.53
NCK1-203ENST00000467911 PPP1R3GB7ZBB8 358 aa11.72□□□□□ -0.53
NCK1-203ENST00000467911 BCAMP50895 628 aa11.72□□□□□ -0.53
NCK1-203ENST00000467911 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
NCK1-203ENST00000467911 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
NCK1-203ENST00000467911 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms