RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
VPS50-209ENST00000467326 EFCAB3Q8N7B9 438 aa10.41□□□□□ -0.74
VPS50-209ENST00000467326 HOXB1P14653 301 aaPredicted RBP10.36□□□□□ -0.75
VPS50-209ENST00000467326 ERBB3P21860 1342 aa10.35□□□□□ -0.75
VPS50-209ENST00000467326 SOX12O15370 315 aa10.35□□□□□ -0.75
VPS50-209ENST00000467326 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
VPS50-209ENST00000467326 DNAJC5Q9H3Z4 198 aa10.33□□□□□ -0.76
VPS50-209ENST00000467326 HOXB3P14651 431 aaPredicted RBP10.32□□□□□ -0.76
VPS50-209ENST00000467326 PHF8Q9UPP1 1060 aa10.32□□□□□ -0.76
VPS50-209ENST00000467326 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
VPS50-209ENST00000467326 ZSWIM6Q9HCJ5 1215 aa10.31□□□□□ -0.76
VPS50-209ENST00000467326 NLRP6P59044 892 aa10.3□□□□□ -0.76
VPS50-209ENST00000467326 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
VPS50-209ENST00000467326 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
VPS50-209ENST00000467326 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
VPS50-209ENST00000467326 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
VPS50-209ENST00000467326 PTGER2P43116 358 aa10.25□□□□□ -0.77
VPS50-209ENST00000467326 BBXQ8WY36 941 aaPredicted RBP10.25□□□□□ -0.77
VPS50-209ENST00000467326 RYDENQ9NUL5 291 aaKnown RBP10.24□□□□□ -0.77
VPS50-209ENST00000467326 VARS2Q5ST30 1063 aaKnown RBP10.23□□□□□ -0.77
VPS50-209ENST00000467326 MYT1LQ9UL68 1186 aa10.22□□□□□ -0.77
VPS50-209ENST00000467326 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.21□□□□□ -0.77
VPS50-209ENST00000467326 ZNF687Q8N1G0 1237 aa10.2□□□□□ -0.78
VPS50-209ENST00000467326 MICALL2Q8IY33 904 aa10.18□□□□□ -0.78
VPS50-209ENST00000467326 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
VPS50-209ENST00000467326 PPP1R37O75864 691 aa10.14□□□□□ -0.79
VPS50-209ENST00000467326 GPR153Q6NV75 609 aa10.12□□□□□ -0.79
VPS50-209ENST00000467326 PAXIP1Q6ZW49 1069 aaPredicted RBP10.11□□□□□ -0.79
VPS50-209ENST00000467326 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
VPS50-209ENST00000467326 CFAP44Q96MT7 982 aa10.09□□□□□ -0.79
VPS50-209ENST00000467326 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
VPS50-209ENST00000467326 ANKRD13DQ6ZTN6 518 aa10.06□□□□□ -0.8
VPS50-209ENST00000467326 ZNF316A6NFI3 1004 aaPredicted RBP10.04□□□□□ -0.8
VPS50-209ENST00000467326 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
VPS50-209ENST00000467326 PBX2P40425 430 aa10.03□□□□□ -0.8
VPS50-209ENST00000467326 LSM11P83369 360 aaKnown RBP eCLIP10□□□□□ -0.81
VPS50-209ENST00000467326 PLCB2Q00722 1185 aa10□□□□□ -0.81
VPS50-209ENST00000467326 TMC2Q8TDI7 906 aa9.98□□□□□ -0.81
VPS50-209ENST00000467326 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
VPS50-209ENST00000467326 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
VPS50-209ENST00000467326 KIF3CO14782 793 aa9.94□□□□□ -0.82
VPS50-209ENST00000467326 NCKAP5LQ9HCH0 1330 aa9.93□□□□□ -0.82
VPS50-209ENST00000467326 PSDA5PKW4 1024 aaPredicted RBP9.93□□□□□ -0.82
VPS50-209ENST00000467326 CRISPLD2Q9H0B8 497 aa9.93□□□□□ -0.82
VPS50-209ENST00000467326 HCSTQ9UBK5 93 aa9.93□□□□□ -0.82
VPS50-209ENST00000467326 GPHNQ9NQX3 736 aaPredicted RBP9.92□□□□□ -0.82
VPS50-209ENST00000467326 SLC34A2O95436 690 aa9.9□□□□□ -0.82
VPS50-209ENST00000467326 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.822e-6■■■■□ 21.9
VPS50-209ENST00000467326 NUDT7P0C024 238 aa9.89□□□□□ -0.83
VPS50-209ENST00000467326 PDE4AP27815 886 aa9.89□□□□□ -0.83
VPS50-209ENST00000467326 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
VPS50-209ENST00000467326 PLA2G2EQ9NZK7 142 aa9.88□□□□□ -0.83
VPS50-209ENST00000467326 FOXK1P85037 733 aa9.87□□□□□ -0.83
VPS50-209ENST00000467326 DSG2Q14126 1118 aa9.87□□□□□ -0.83
VPS50-209ENST00000467326 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
VPS50-209ENST00000467326 HAP1P54257 671 aaPredicted RBP9.86□□□□□ -0.83
VPS50-209ENST00000467326 PPP1R15BQ5SWA1 713 aa9.86□□□□□ -0.83
VPS50-209ENST00000467326 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
VPS50-209ENST00000467326 MFSD10Q14728 455 aa9.85□□□□□ -0.83
VPS50-209ENST00000467326 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
VPS50-209ENST00000467326 PCDHGA4Q9Y5G9 962 aa9.85□□□□□ -0.83
VPS50-209ENST00000467326 ARHGAP33O14559 1287 aa9.84□□□□□ -0.83
VPS50-209ENST00000467326 PLPP6Q8IY26 295 aa9.84□□□□□ -0.83
VPS50-209ENST00000467326 STAC3Q96MF2 364 aa9.82□□□□□ -0.84
VPS50-209ENST00000467326 ADGRD1Q6QNK2 874 aa9.81□□□□□ -0.84
VPS50-209ENST00000467326 TK2O00142 265 aa9.8□□□□□ -0.84
VPS50-209ENST00000467326 KCNH8Q96L42 1107 aa9.8□□□□□ -0.84
VPS50-209ENST00000467326 AXIN2Q9Y2T1 843 aa9.8□□□□□ -0.84
VPS50-209ENST00000467326 WDR70Q9NW82 654 aa9.76□□□□□ -0.85
VPS50-209ENST00000467326 TBC1D12O60347 775 aa9.75□□□□□ -0.85
VPS50-209ENST00000467326 POTEEQ6S8J3 1075 aa9.75□□□□□ -0.85
VPS50-209ENST00000467326 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
VPS50-209ENST00000467326 PTCD2Q8WV60 388 aaKnown RBP9.73□□□□□ -0.85
VPS50-209ENST00000467326 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
VPS50-209ENST00000467326 CAMK2BQ13554 666 aa9.72□□□□□ -0.85
VPS50-209ENST00000467326 OXER1Q8TDS5 423 aa9.72□□□□□ -0.85
VPS50-209ENST00000467326 E2F4Q16254 413 aa9.7□□□□□ -0.86
VPS50-209ENST00000467326 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
VPS50-209ENST00000467326 HRO43593 1189 aa9.68□□□□□ -0.86
VPS50-209ENST00000467326 RGS20O76081 388 aa9.68□□□□□ -0.86
VPS50-209ENST00000467326 VSIG10Q8N0Z9 540 aa9.67□□□□□ -0.86
VPS50-209ENST00000467326 KCTD12Q96CX2 325 aaKnown RBP9.67□□□□□ -0.86
VPS50-209ENST00000467326 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
VPS50-209ENST00000467326 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
VPS50-209ENST00000467326 DPYSL4O14531 572 aa9.64□□□□□ -0.87
VPS50-209ENST00000467326 PSEN2P49810 448 aa9.64□□□□□ -0.87
VPS50-209ENST00000467326 MAP3K9P80192 1104 aa9.64□□□□□ -0.87
VPS50-209ENST00000467326 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
VPS50-209ENST00000467326 KCNV2Q8TDN2 545 aa9.64□□□□□ -0.87
VPS50-209ENST00000467326 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
VPS50-209ENST00000467326 EVI5O60447 810 aa9.6□□□□□ -0.87
VPS50-209ENST00000467326 IFFO2Q5TF58 517 aa9.6□□□□□ -0.87
VPS50-209ENST00000467326 PDIA6Q15084 440 aa9.59□□□□□ -0.87
VPS50-209ENST00000467326 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
VPS50-209ENST00000467326 ARIH1Q9Y4X5 557 aaPredicted RBP9.59□□□□□ -0.87
VPS50-209ENST00000467326 SLC24A1O60721 1099 aa9.58□□□□□ -0.88
VPS50-209ENST00000467326 GOLGA8CPA6NN73 597 aa9.57□□□□□ -0.88
VPS50-209ENST00000467326 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
VPS50-209ENST00000467326 SLC4A5Q9BY07 1137 aa9.57□□□□□ -0.88
VPS50-209ENST00000467326 PTPN5P54829 565 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms