RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 CABP2Q9NPB3 220 aa9.29□□□□□ -0.92
MSL3-209ENST00000467141 A0A0G2JS52 829 aa9.27□□□□□ -0.93
MSL3-209ENST00000467141 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
MSL3-209ENST00000467141 PTPN5P54829 565 aa9.24□□□□□ -0.93
MSL3-209ENST00000467141 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
MSL3-209ENST00000467141 PDAP1Q13442 181 aaKnown RBP9.18□□□□□ -0.94
MSL3-209ENST00000467141 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
MSL3-209ENST00000467141 NUDT7P0C024 238 aa9.17□□□□□ -0.94
MSL3-209ENST00000467141 MICALL2Q8IY33 904 aa9.17□□□□□ -0.94
MSL3-209ENST00000467141 ARHGAP33O14559 1287 aa9.16□□□□□ -0.94
MSL3-209ENST00000467141 HRO43593 1189 aa9.16□□□□□ -0.94
MSL3-209ENST00000467141 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
MSL3-209ENST00000467141 LCE2BO14633 110 aa9.15□□□□□ -0.94
MSL3-209ENST00000467141 TK2O00142 265 aa9.12□□□□□ -0.95
MSL3-209ENST00000467141 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
MSL3-209ENST00000467141 GSE1Q14687 1217 aa9.1□□□□□ -0.95
MSL3-209ENST00000467141 DMRTA1Q5VZB9 504 aa9.08□□□□□ -0.96
MSL3-209ENST00000467141 LAPTM4AQ15012 233 aa9.07□□□□□ -0.96
MSL3-209ENST00000467141 ZNF787Q6DD87 383 aa9.07□□□□□ -0.96
MSL3-209ENST00000467141 ZNF775Q96BV0 537 aaPredicted RBP9.07□□□□□ -0.96
MSL3-209ENST00000467141 PSEN2P49810 448 aa9.05□□□□□ -0.96
MSL3-209ENST00000467141 GFRA3O60609 400 aa9.03□□□□□ -0.96
MSL3-209ENST00000467141 EFCAB3Q8N7B9 438 aa9.03□□□□□ -0.96
MSL3-209ENST00000467141 PCDHGA4Q9Y5G9 962 aa8.97□□□□□ -0.97
MSL3-209ENST00000467141 LOC100996750A0A140TA64 210 aa8.95□□□□□ -0.98
MSL3-209ENST00000467141 THSD4Q6ZMP0 1018 aa8.95□□□□□ -0.98
MSL3-209ENST00000467141 KRTAP4-6Q9BYQ5 205 aa8.95□□□□□ -0.98
MSL3-209ENST00000467141 PSDA5PKW4 1024 aaPredicted RBP8.94□□□□□ -0.98
MSL3-209ENST00000467141 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
MSL3-209ENST00000467141 KLHL34Q8N239 644 aa8.88□□□□□ -0.99
MSL3-209ENST00000467141 WNT2BQ93097 391 aa8.87□□□□□ -0.99
MSL3-209ENST00000467141 MS4A4AQ96JQ5 239 aa8.86□□□□□ -0.99
MSL3-209ENST00000467141 VPS9D1Q9Y2B5 631 aa8.86□□□□□ -0.99
MSL3-209ENST00000467141 KCNH8Q96L42 1107 aa8.84□□□□□ -0.99
MSL3-209ENST00000467141 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
MSL3-209ENST00000467141 SLC34A2O95436 690 aa8.83□□□□□ -1
MSL3-209ENST00000467141 KCNK17Q96T54 332 aa8.83□□□□□ -1
MSL3-209ENST00000467141 SOX12O15370 315 aa8.82□□□□□ -1
MSL3-209ENST00000467141 ITGBL1O95965 494 aaPredicted RBP8.82□□□□□ -1
MSL3-209ENST00000467141 C2orf72A6NCS6 295 aa8.81□□□□□ -1
MSL3-209ENST00000467141 PPP4R3BQ5MIZ7 849 aa8.8□□□□□ -1
MSL3-209ENST00000467141 PHF8Q9UPP1 1060 aa8.8□□□□□ -1
MSL3-209ENST00000467141 KIF3CO14782 793 aa8.77□□□□□ -1.01
MSL3-209ENST00000467141 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
MSL3-209ENST00000467141 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
MSL3-209ENST00000467141 KCNC4Q03721 635 aa8.73□□□□□ -1.01
MSL3-209ENST00000467141 CIZ1Q9ULV3 898 aaPredicted RBP8.73□□□□□ -1.01
MSL3-209ENST00000467141 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.02
MSL3-209ENST00000467141 FKBP8Q14318 412 aa8.7□□□□□ -1.02
MSL3-209ENST00000467141 PRKD2Q9BZL6 878 aa8.68□□□□□ -1.02
MSL3-209ENST00000467141 TREML4Q6UXN2 200 aa8.67□□□□□ -1.02
MSL3-209ENST00000467141 SLC4A5Q9BY07 1137 aa8.67□□□□□ -1.02
MSL3-209ENST00000467141 CCDC180Q9P1Z9 1646 aa8.65□□□□□ -1.02
MSL3-209ENST00000467141 STK17AQ9UEE5 414 aa8.65□□□□□ -1.02
MSL3-209ENST00000467141 TMC2Q8TDI7 906 aa8.63□□□□□ -1.03
MSL3-209ENST00000467141 PDZRN3Q9UPQ7 1066 aa8.63□□□□□ -1.03
MSL3-209ENST00000467141 POTECB2RU33 542 aa8.61□□□□□ -1.03
MSL3-209ENST00000467141 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
MSL3-209ENST00000467141 NBPF3Q9H094 633 aa8.61□□□□□ -1.03
MSL3-209ENST00000467141 NLRP6P59044 892 aa8.6□□□□□ -1.03
MSL3-209ENST00000467141 ANKK1Q8NFD2 765 aa8.59□□□□□ -1.03
MSL3-209ENST00000467141 PTCD2Q8WV60 388 aaKnown RBP8.59□□□□□ -1.03
MSL3-209ENST00000467141 BCAMP50895 628 aa8.58□□□□□ -1.04
MSL3-209ENST00000467141 FBXO3Q9UK99 471 aa8.58□□□□□ -1.04
MSL3-209ENST00000467141 ZBED2Q9BTP6 218 aa8.57□□□□□ -1.04
MSL3-209ENST00000467141 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
MSL3-209ENST00000467141 BCL2L12Q9HB09 334 aa8.54□□□□□ -1.04
MSL3-209ENST00000467141 V9GY48 417 aaPredicted RBP8.54□□□□□ -1.04
MSL3-209ENST00000467141 PTPREP23469 700 aa8.53□□□□□ -1.04
MSL3-209ENST00000467141 FBXO22Q8NEZ5 403 aa8.53□□□□□ -1.04
MSL3-209ENST00000467141 WBP1LQ9NX94 342 aa8.53□□□□□ -1.04
MSL3-209ENST00000467141 SUZ12Q15022 739 aaKnown RBP8.52□□□□□ -1.05
MSL3-209ENST00000467141 ZNF454Q8N9F8 522 aa8.52□□□□□ -1.05
MSL3-209ENST00000467141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.51□□□□□ -1.05
MSL3-209ENST00000467141 TBC1D12O60347 775 aa8.51□□□□□ -1.05
MSL3-209ENST00000467141 VASPP50552 380 aaPredicted RBP8.51□□□□□ -1.05
MSL3-209ENST00000467141 ZFP91Q96JP5 570 aaPredicted RBP8.51□□□□□ -1.05
MSL3-209ENST00000467141 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
MSL3-209ENST00000467141 INSM1Q01101 510 aaPredicted RBP8.49□□□□□ -1.05
MSL3-209ENST00000467141 SPOCK2Q92563 424 aa8.47□□□□□ -1.05
MSL3-209ENST00000467141 WFS1O76024 890 aa8.46□□□□□ -1.06
MSL3-209ENST00000467141 MYT1Q01538 1121 aa8.46□□□□□ -1.06
MSL3-209ENST00000467141 ABCC9O60706 1549 aa8.45□□□□□ -1.06
MSL3-209ENST00000467141 PKDCCQ504Y2 493 aa8.45□□□□□ -1.06
MSL3-209ENST00000467141 PPP1R18Q6NYC8 613 aa8.44□□□□□ -1.06
MSL3-209ENST00000467141 RIOK3O14730 519 aaKnown RBP8.4□□□□□ -1.06
MSL3-209ENST00000467141 PLPP6Q8IY26 295 aa8.4□□□□□ -1.06
MSL3-209ENST00000467141 RABGEF1Q9UJ41 708 aa8.4□□□□□ -1.06
MSL3-209ENST00000467141 TRIM41Q8WV44 630 aa8.39□□□□□ -1.07
MSL3-209ENST00000467141 MFRPQ9BY79 579 aa8.39□□□□□ -1.07
MSL3-209ENST00000467141 VGFO15240 615 aaPredicted RBP8.38□□□□□ -1.07
MSL3-209ENST00000467141 WIPF1O43516 503 aa8.38□□□□□ -1.07
MSL3-209ENST00000467141 ZFRQ96KR1 1074 aaKnown RBP8.38□□□□□ -1.07
MSL3-209ENST00000467141 DGAT1O75907 488 aa8.36□□□□□ -1.07
MSL3-209ENST00000467141 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.36□□□□□ -1.07
MSL3-209ENST00000467141 FOSBP53539 338 aa8.35□□□□□ -1.07
MSL3-209ENST00000467141 FOXK1P85037 733 aa8.34□□□□□ -1.07
MSL3-209ENST00000467141 PROX2Q3B8N5 592 aa8.34□□□□□ -1.07
MSL3-209ENST00000467141 LAPTM4BQ86VI4 370 aa8.34□□□□□ -1.07
MSL3-209ENST00000467141 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms