RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 TCOF1Q13428 1488 aaKnown RBP20.34■□□□□ 0.85
SEC22A-203ENST00000466950 PLCH2O75038 1416 aa20.34■□□□□ 0.85
SEC22A-203ENST00000466950 PPRC1Q5VV67 1664 aaKnown RBP20.33■□□□□ 0.85
SEC22A-203ENST00000466950 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
SEC22A-203ENST00000466950 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
SEC22A-203ENST00000466950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.84
SEC22A-203ENST00000466950 SAMD9LQ8IVG5 1584 aa20.31■□□□□ 0.84
SEC22A-203ENST00000466950 CD109Q6YHK3 1445 aa20.29■□□□□ 0.84
SEC22A-203ENST00000466950 TSPOAP1O95153 1857 aa20.29■□□□□ 0.84
SEC22A-203ENST00000466950 CAMSAP2Q08AD1 1489 aa20.28■□□□□ 0.84
SEC22A-203ENST00000466950 CROCC2H7BZ55 1655 aa20.27■□□□□ 0.84
SEC22A-203ENST00000466950 ABCC1P33527 1531 aa20.27■□□□□ 0.83
SEC22A-203ENST00000466950 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
SEC22A-203ENST00000466950 ARHGEF5Q12774 1597 aa20.25■□□□□ 0.83
SEC22A-203ENST00000466950 FANCAO15360 1455 aa20.25■□□□□ 0.83
SEC22A-203ENST00000466950 NEO1Q92859 1461 aa20.25■□□□□ 0.83
SEC22A-203ENST00000466950 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
SEC22A-203ENST00000466950 TEX14Q8IWB6 1497 aa20.24■□□□□ 0.83
SEC22A-203ENST00000466950 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
SEC22A-203ENST00000466950 FAM69CQ0P6D2 419 aa20.23■□□□□ 0.83
SEC22A-203ENST00000466950 KIAA1107Q9UPP5 1409 aa20.21■□□□□ 0.83
SEC22A-203ENST00000466950 SYCP2Q9BX26 1530 aa20.2■□□□□ 0.82
SEC22A-203ENST00000466950 EFCAB2Q5VUJ9 269 aa20.19■□□□□ 0.82
SEC22A-203ENST00000466950 TRIM26Q12899 539 aaPredicted RBP20.18■□□□□ 0.82
SEC22A-203ENST00000466950 ADGBQ8N7X0 1667 aa20.18■□□□□ 0.82
SEC22A-203ENST00000466950 AKNAQ7Z591 1439 aa20.16■□□□□ 0.82
SEC22A-203ENST00000466950 ADGRL1O94910 1474 aa20.16■□□□□ 0.82
SEC22A-203ENST00000466950 MBD5Q9P267 1494 aa20.16■□□□□ 0.82
SEC22A-203ENST00000466950 SHANK2Q9UPX8 1470 aa20.16■□□□□ 0.82
SEC22A-203ENST00000466950 MAST1Q9Y2H9 1570 aa20.15■□□□□ 0.82
SEC22A-203ENST00000466950 RICTORQ6R327 1708 aa20.15■□□□□ 0.82
SEC22A-203ENST00000466950 CCDC141Q6ZP82 1450 aa20.14■□□□□ 0.81
SEC22A-203ENST00000466950 DAPK1P53355 1430 aa20.13■□□□□ 0.81
SEC22A-203ENST00000466950 ARHGEF12Q9NZN5 1544 aa20.12■□□□□ 0.81
SEC22A-203ENST00000466950 KDM5CP41229 1560 aa20.12■□□□□ 0.81
SEC22A-203ENST00000466950 ZNF644Q9H582 1327 aaPredicted RBP20.11■□□□□ 0.81
SEC22A-203ENST00000466950 FAM50AQ14320 339 aaKnown RBP20.11■□□□□ 0.81
SEC22A-203ENST00000466950 ABCC5O15440 1437 aa20.1■□□□□ 0.81
SEC22A-203ENST00000466950 INO80Q9ULG1 1556 aaPredicted RBP20.09■□□□□ 0.81
SEC22A-203ENST00000466950 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
SEC22A-203ENST00000466950 ZNF518AQ6AHZ1 1483 aa20.09■□□□□ 0.81
SEC22A-203ENST00000466950 POGZQ7Z3K3 1410 aa20.09■□□□□ 0.81
SEC22A-203ENST00000466950 GCC2Q8IWJ2 1684 aa20.08■□□□□ 0.81
SEC22A-203ENST00000466950 RSPH4AQ5TD94 716 aa20.08■□□□□ 0.81
SEC22A-203ENST00000466950 PLXNC1O60486 1568 aa20.08■□□□□ 0.8
SEC22A-203ENST00000466950 FRMPD1Q5SYB0 1578 aa20.08■□□□□ 0.8
SEC22A-203ENST00000466950 ADGRL2O95490 1459 aa20.07■□□□□ 0.8
SEC22A-203ENST00000466950 SCAPERQ9BY12 1400 aa20.07■□□□□ 0.8
SEC22A-203ENST00000466950 ZMYM4Q5VZL5 1548 aa20.07■□□□□ 0.8
SEC22A-203ENST00000466950 DENND4BO75064 1496 aaPredicted RBP20.05■□□□□ 0.8
SEC22A-203ENST00000466950 HECW2Q9P2P5 1572 aa20.05■□□□□ 0.8
SEC22A-203ENST00000466950 ZFYVE16Q7Z3T8 1539 aa20.05■□□□□ 0.8
SEC22A-203ENST00000466950 TRAPPC8Q9Y2L5 1435 aa20.04■□□□□ 0.8
SEC22A-203ENST00000466950 PTPRKQ15262 1439 aa20.03■□□□□ 0.8
SEC22A-203ENST00000466950 C9orf84Q5VXU9 1444 aa20.03■□□□□ 0.8
SEC22A-203ENST00000466950 ROCK1Q13464 1354 aa20.03■□□□□ 0.8
SEC22A-203ENST00000466950 TRHP20396 242 aaPredicted RBP20.02■□□□□ 0.8
SEC22A-203ENST00000466950 KIDINS220Q9ULH0 1771 aa20.02■□□□□ 0.8
SEC22A-203ENST00000466950 ATP7AQ04656 1500 aa20.02■□□□□ 0.79
SEC22A-203ENST00000466950 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.79
SEC22A-203ENST00000466950 HNRNPMP52272 730 aaKnown RBP eCLIP20■□□□□ 0.791e-9■■■■■ 33.1
SEC22A-203ENST00000466950 MLH3Q9UHC1 1453 aa19.99■□□□□ 0.79
SEC22A-203ENST00000466950 KDM6BO15054 1643 aa19.99■□□□□ 0.79
SEC22A-203ENST00000466950 HFM1A2PYH4 1435 aa19.96■□□□□ 0.79
SEC22A-203ENST00000466950 MAGI2Q86UL8 1455 aa19.96■□□□□ 0.79
SEC22A-203ENST00000466950 NCOA1Q15788 1441 aa19.95■□□□□ 0.78
SEC22A-203ENST00000466950 ABCA6Q8N139 1617 aa19.94■□□□□ 0.78
SEC22A-203ENST00000466950 TSPY4P0CV99 314 aa19.94■□□□□ 0.78
SEC22A-203ENST00000466950 TSPY10P0CW01 314 aa19.94■□□□□ 0.78
SEC22A-203ENST00000466950 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
SEC22A-203ENST00000466950 COL17A1Q9UMD9 1497 aaPredicted RBP19.93■□□□□ 0.78
SEC22A-203ENST00000466950 ARHGEF40Q8TER5 1519 aa19.92■□□□□ 0.78
SEC22A-203ENST00000466950 DIP2CQ9Y2E4 1556 aa19.92■□□□□ 0.78
SEC22A-203ENST00000466950 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
SEC22A-203ENST00000466950 SPAG9O60271 1321 aaKnown RBP19.92■□□□□ 0.78
SEC22A-203ENST00000466950 DUOX2Q9NRD8 1548 aa19.92■□□□□ 0.78
SEC22A-203ENST00000466950 EIF2AK4Q9P2K8 1649 aaKnown RBP19.91■□□□□ 0.78
SEC22A-203ENST00000466950 ITGAEP38570 1179 aa19.91■□□□□ 0.78
SEC22A-203ENST00000466950 NAIPQ13075 1403 aa19.91■□□□□ 0.78
SEC22A-203ENST00000466950 REREQ9P2R6 1566 aa19.91■□□□□ 0.78
SEC22A-203ENST00000466950 BCORL1Q5H9F3 1711 aa19.9■□□□□ 0.78
SEC22A-203ENST00000466950 AFAP1Q8N556 730 aa19.9■□□□□ 0.78
SEC22A-203ENST00000466950 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
SEC22A-203ENST00000466950 RAPGEF3O95398 923 aa19.87■□□□□ 0.77
SEC22A-203ENST00000466950 ERBINQ96RT1 1412 aa19.86■□□□□ 0.77
SEC22A-203ENST00000466950 SETD5Q9C0A6 1442 aa19.86■□□□□ 0.77
SEC22A-203ENST00000466950 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
SEC22A-203ENST00000466950 DEPDC5O75140 1603 aa19.84■□□□□ 0.77
SEC22A-203ENST00000466950 UNC13BO14795 1591 aa19.83■□□□□ 0.76
SEC22A-203ENST00000466950 RNF17Q9BXT8 1623 aaKnown RBP19.82■□□□□ 0.76
SEC22A-203ENST00000466950 ANKRD50Q9ULJ7 1429 aa19.82■□□□□ 0.76
SEC22A-203ENST00000466950 A2MP01023 1474 aa19.81■□□□□ 0.76
SEC22A-203ENST00000466950 YEATS2Q9ULM3 1422 aa19.81■□□□□ 0.76
SEC22A-203ENST00000466950 ACIN1Q9UKV3 1341 aaKnown RBP19.79■□□□□ 0.76
SEC22A-203ENST00000466950 HRCP23327 699 aa19.79■□□□□ 0.76
SEC22A-203ENST00000466950 RRP7BPQ9NSQ0 103 aa19.79■□□□□ 0.76
SEC22A-203ENST00000466950 RAB3GAP2Q9H2M9 1393 aa19.79■□□□□ 0.76
SEC22A-203ENST00000466950 ATP10AO60312 1499 aa19.79■□□□□ 0.76
SEC22A-203ENST00000466950 DHX29Q7Z478 1369 aaKnown RBP19.78■□□□□ 0.76
SEC22A-203ENST00000466950 AGLP35573 1532 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms