RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 CDAN1Q8IWY9 1227 aa10.17□□□□□ -0.78
CALD1-214ENST00000466704 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
CALD1-214ENST00000466704 SLAIN1Q8ND83 568 aa10.14□□□□□ -0.79
CALD1-214ENST00000466704 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
CALD1-214ENST00000466704 ST18O60284 1047 aa10.11□□□□□ -0.79
CALD1-214ENST00000466704 C3orf67Q6ZVT6 689 aa10.1□□□□□ -0.79
CALD1-214ENST00000466704 TSHZ2Q9NRE2 1034 aa10.1□□□□□ -0.79
CALD1-214ENST00000466704 TMEM121BQ9BXQ6 578 aaPredicted RBP10.07□□□□□ -0.8
CALD1-214ENST00000466704 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.06□□□□□ -0.8
CALD1-214ENST00000466704 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
CALD1-214ENST00000466704 CADPS2Q86UW7 1296 aa10.03□□□□□ -0.8
CALD1-214ENST00000466704 PDE4AP27815 886 aa10.01□□□□□ -0.81
CALD1-214ENST00000466704 TMC2Q8TDI7 906 aa10.01□□□□□ -0.81
CALD1-214ENST00000466704 SNPHO15079 494 aa9.99□□□□□ -0.81
CALD1-214ENST00000466704 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
CALD1-214ENST00000466704 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
CALD1-214ENST00000466704 WDR70Q9NW82 654 aa9.97□□□□□ -0.81
CALD1-214ENST00000466704 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
CALD1-214ENST00000466704 CRISPLD2Q9H0B8 497 aa9.96□□□□□ -0.82
CALD1-214ENST00000466704 GPHNQ9NQX3 736 aaPredicted RBP9.96□□□□□ -0.82
CALD1-214ENST00000466704 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.82
CALD1-214ENST00000466704 TMEM92Q6UXU6 159 aa9.95□□□□□ -0.82
CALD1-214ENST00000466704 SPNS2Q8IVW8 549 aa9.95□□□□□ -0.82
CALD1-214ENST00000466704 MMRN1Q13201 1228 aa9.94□□□□□ -0.82
CALD1-214ENST00000466704 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
CALD1-214ENST00000466704 KIF3CO14782 793 aa9.92□□□□□ -0.82
CALD1-214ENST00000466704 PPP1R15BQ5SWA1 713 aa9.91□□□□□ -0.82
CALD1-214ENST00000466704 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
CALD1-214ENST00000466704 FOXK1P85037 733 aa9.9□□□□□ -0.82
CALD1-214ENST00000466704 DSG2Q14126 1118 aa9.9□□□□□ -0.82
CALD1-214ENST00000466704 MFSD10Q14728 455 aa9.9□□□□□ -0.82
CALD1-214ENST00000466704 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
CALD1-214ENST00000466704 PLPP6Q8IY26 295 aa9.88□□□□□ -0.83
CALD1-214ENST00000466704 E2F4Q16254 413 aa9.84□□□□□ -0.83
CALD1-214ENST00000466704 EMP3P54852 163 aa9.81□□□□□ -0.84
CALD1-214ENST00000466704 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
CALD1-214ENST00000466704 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
CALD1-214ENST00000466704 RIMBP2O15034 1052 aa9.78□□□□□ -0.84
CALD1-214ENST00000466704 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
CALD1-214ENST00000466704 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
CALD1-214ENST00000466704 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
CALD1-214ENST00000466704 POTEB3A0JP26 581 aa9.77□□□□□ -0.85
CALD1-214ENST00000466704 CAMK2BQ13554 666 aa9.77□□□□□ -0.85
CALD1-214ENST00000466704 POTEBQ6S5H4 581 aa9.77□□□□□ -0.85
CALD1-214ENST00000466704 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
CALD1-214ENST00000466704 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
CALD1-214ENST00000466704 HS3ST6Q96QI5 342 aa9.77□□□□□ -0.85
CALD1-214ENST00000466704 TBC1D12O60347 775 aa9.74□□□□□ -0.85
CALD1-214ENST00000466704 SLC34A2O95436 690 aa9.74□□□□□ -0.85
CALD1-214ENST00000466704 HOXB3P14651 431 aaPredicted RBP9.74□□□□□ -0.85
CALD1-214ENST00000466704 MAP3K9P80192 1104 aa9.74□□□□□ -0.85
CALD1-214ENST00000466704 EMILIN3Q9NT22 766 aa9.74□□□□□ -0.85
CALD1-214ENST00000466704 PTCD2Q8WV60 388 aaKnown RBP9.73□□□□□ -0.85
CALD1-214ENST00000466704 FAM205CA6NFA0 338 aa9.72□□□□□ -0.85
CALD1-214ENST00000466704 OXER1Q8TDS5 423 aa9.72□□□□□ -0.85
CALD1-214ENST00000466704 DPYSL4O14531 572 aa9.71□□□□□ -0.86
CALD1-214ENST00000466704 ARHGEF1Q92888 912 aaKnown RBP9.71□□□□□ -0.86
CALD1-214ENST00000466704 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
CALD1-214ENST00000466704 PCDHGA4Q9Y5G9 962 aa9.71□□□□□ -0.86
CALD1-214ENST00000466704 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
CALD1-214ENST00000466704 ARSIQ5FYB1 569 aa9.68□□□□□ -0.86
CALD1-214ENST00000466704 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
CALD1-214ENST00000466704 GPR153Q6NV75 609 aa9.66□□□□□ -0.86
CALD1-214ENST00000466704 SPDYE16A6NNV3 312 aaPredicted RBP9.65□□□□□ -0.86
CALD1-214ENST00000466704 EVI5O60447 810 aa9.65□□□□□ -0.86
CALD1-214ENST00000466704 NUDT7P0C024 238 aa9.65□□□□□ -0.86
CALD1-214ENST00000466704 NBR1Q14596 966 aa9.65□□□□□ -0.86
CALD1-214ENST00000466704 KHSRPQ92945 711 aaKnown RBP eCLIP9.65□□□□□ -0.86
CALD1-214ENST00000466704 HOXB1P14653 301 aaPredicted RBP9.64□□□□□ -0.87
CALD1-214ENST00000466704 PDIA6Q15084 440 aa9.63□□□□□ -0.87
CALD1-214ENST00000466704 SEMA3EO15041 775 aa9.58□□□□□ -0.88
CALD1-214ENST00000466704 BCANQ96GW7 911 aa9.58□□□□□ -0.88
CALD1-214ENST00000466704 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
CALD1-214ENST00000466704 LHX6Q9UPM6 363 aa9.56□□□□□ -0.88
CALD1-214ENST00000466704 ERBB3P21860 1342 aa9.56□□□□□ -0.88
CALD1-214ENST00000466704 KDM4FA0A1W2PPD8 638 aa9.55□□□□□ -0.88
CALD1-214ENST00000466704 GRXCR2A6NFK2 248 aa9.55□□□□□ -0.88
CALD1-214ENST00000466704 DDX12PQ92771 950 aa9.55□□□□□ -0.88
CALD1-214ENST00000466704 PSDA5PKW4 1024 aaPredicted RBP9.53□□□□□ -0.88
CALD1-214ENST00000466704 TULP1O00294 542 aaPredicted RBP9.53□□□□□ -0.88
CALD1-214ENST00000466704 PTGER2P43116 358 aa9.53□□□□□ -0.88
CALD1-214ENST00000466704 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
CALD1-214ENST00000466704 MLLT3P42568 568 aaPredicted RBP9.52□□□□□ -0.89
CALD1-214ENST00000466704 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
CALD1-214ENST00000466704 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
CALD1-214ENST00000466704 PHF14O94880 888 aa9.51□□□□□ -0.89
CALD1-214ENST00000466704 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
CALD1-214ENST00000466704 JPH4Q96JJ6 628 aa9.51□□□□□ -0.89
CALD1-214ENST00000466704 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
CALD1-214ENST00000466704 FOSBP53539 338 aa9.49□□□□□ -0.89
CALD1-214ENST00000466704 PPP4R3BQ5MIZ7 849 aa9.49□□□□□ -0.89
CALD1-214ENST00000466704 TYW1BQ6NUM6 668 aa9.49□□□□□ -0.89
CALD1-214ENST00000466704 EPAS1Q99814 870 aa9.49□□□□□ -0.89
CALD1-214ENST00000466704 PCDHGA10Q9Y5H3 936 aa9.48□□□□□ -0.89
CALD1-214ENST00000466704 ZDHHC16Q969W1 377 aa9.47□□□□□ -0.89
CALD1-214ENST00000466704 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.9
CALD1-214ENST00000466704 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
CALD1-214ENST00000466704 RBM33Q96EV2 1170 aaKnown RBP9.45□□□□□ -0.9
CALD1-214ENST00000466704 MYT1LQ9UL68 1186 aa9.45□□□□□ -0.9
CALD1-214ENST00000466704 OSBPP22059 807 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms