RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 SCAPERQ9BY12 1400 aa26.88■■□□□ 1.89
SDHB-203ENST00000466613 POGZQ7Z3K3 1410 aa26.87■■□□□ 1.89
SDHB-203ENST00000466613 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
SDHB-203ENST00000466613 PREX2Q70Z35 1606 aa26.86■■□□□ 1.89
SDHB-203ENST00000466613 ZFYVE16Q7Z3T8 1539 aa26.84■■□□□ 1.89
SDHB-203ENST00000466613 ADAMTSL3P82987 1691 aa26.83■■□□□ 1.89
SDHB-203ENST00000466613 MAGI2Q86UL8 1455 aa26.83■■□□□ 1.89
SDHB-203ENST00000466613 BCORL1Q5H9F3 1711 aa26.83■■□□□ 1.89
SDHB-203ENST00000466613 CDC42BPAQ5VT25 1732 aa26.82■■□□□ 1.88
SDHB-203ENST00000466613 YEATS2Q9ULM3 1422 aa26.78■■□□□ 1.88
SDHB-203ENST00000466613 ZNF518AQ6AHZ1 1483 aa26.76■■□□□ 1.87
SDHB-203ENST00000466613 ARID4BQ4LE39 1312 aaPredicted RBP26.75■■□□□ 1.87
SDHB-203ENST00000466613 SIGLEC1Q9BZZ2 1709 aa26.75■■□□□ 1.87
SDHB-203ENST00000466613 KDM5CP41229 1560 aa26.75■■□□□ 1.87
SDHB-203ENST00000466613 MADDQ8WXG6 1647 aa26.73■■□□□ 1.87
SDHB-203ENST00000466613 ABCC1P33527 1531 aa26.73■■□□□ 1.87
SDHB-203ENST00000466613 ITSN2Q9NZM3 1697 aa26.73■■□□□ 1.87
SDHB-203ENST00000466613 PTPRMP28827 1452 aa26.69■■□□□ 1.86
SDHB-203ENST00000466613 HECW2Q9P2P5 1572 aa26.69■■□□□ 1.86
SDHB-203ENST00000466613 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
SDHB-203ENST00000466613 MTUS2Q5JR59 1369 aa26.68■■□□□ 1.86
SDHB-203ENST00000466613 GPATCH8Q9UKJ3 1502 aaKnown RBP26.67■■□□□ 1.86
SDHB-203ENST00000466613 ATP10AO60312 1499 aa26.67■■□□□ 1.86
SDHB-203ENST00000466613 EHBP1L1Q8N3D4 1523 aa26.66■■□□□ 1.86
SDHB-203ENST00000466613 ARHGEF12Q9NZN5 1544 aa26.66■■□□□ 1.86
SDHB-203ENST00000466613 AFAP1Q8N556 730 aa26.66■■□□□ 1.86
SDHB-203ENST00000466613 C9orf84Q5VXU9 1444 aa26.65■■□□□ 1.86
SDHB-203ENST00000466613 RIMS1Q86UR5 1692 aaKnown RBP26.65■■□□□ 1.86
SDHB-203ENST00000466613 SAMD9LQ8IVG5 1584 aa26.64■■□□□ 1.86
SDHB-203ENST00000466613 TRAPPC8Q9Y2L5 1435 aa26.62■■□□□ 1.85
SDHB-203ENST00000466613 DIP2CQ9Y2E4 1556 aa26.62■■□□□ 1.85
SDHB-203ENST00000466613 MLH3Q9UHC1 1453 aa26.62■■□□□ 1.85
SDHB-203ENST00000466613 ABCA6Q8N139 1617 aa26.6■■□□□ 1.85
SDHB-203ENST00000466613 CCNB3Q8WWL7 1395 aa26.59■■□□□ 1.85
SDHB-203ENST00000466613 FER1L4A9Z1Z3 1794 aa26.59■■□□□ 1.85
SDHB-203ENST00000466613 SYCP2Q9BX26 1530 aa26.58■■□□□ 1.85
SDHB-203ENST00000466613 TIAM1Q13009 1591 aa26.58■■□□□ 1.85
SDHB-203ENST00000466613 REREQ9P2R6 1566 aa26.58■■□□□ 1.85
SDHB-203ENST00000466613 VPS8Q8N3P4 1428 aa26.57■■□□□ 1.84
SDHB-203ENST00000466613 ZNF777Q9ULD5 760 aaPredicted RBP26.57■■□□□ 1.84
SDHB-203ENST00000466613 MYT1LQ9UL68 1186 aa26.56■■□□□ 1.84
SDHB-203ENST00000466613 KIDINS220Q9ULH0 1771 aa26.56■■□□□ 1.84
SDHB-203ENST00000466613 CFDP1Q9UEE9 299 aaPredicted RBP26.54■■□□□ 1.84
SDHB-203ENST00000466613 PLEKHH2Q8IVE3 1493 aa26.54■■□□□ 1.84
SDHB-203ENST00000466613 MLECQ14165 292 aa26.53■■□□□ 1.84
SDHB-203ENST00000466613 SUPT6HQ7KZ85 1726 aaKnown RBP26.53■■□□□ 1.84
SDHB-203ENST00000466613 KIAA1107Q9UPP5 1409 aa26.52■■□□□ 1.84
SDHB-203ENST00000466613 NCOA2Q15596 1464 aa26.47■■□□□ 1.83
SDHB-203ENST00000466613 AGLP35573 1532 aa26.46■■□□□ 1.83
SDHB-203ENST00000466613 HNRNPMP52272 730 aaKnown RBP eCLIP26.46■■□□□ 1.83
SDHB-203ENST00000466613 INO80Q9ULG1 1556 aaPredicted RBP26.45■■□□□ 1.82
SDHB-203ENST00000466613 ATP7AQ04656 1500 aa26.44■■□□□ 1.82
SDHB-203ENST00000466613 SPAG9O60271 1321 aaKnown RBP26.42■■□□□ 1.82
SDHB-203ENST00000466613 MAP3K1Q13233 1512 aa26.42■■□□□ 1.82
SDHB-203ENST00000466613 LRRC9Q6ZRR7 1453 aa26.42■■□□□ 1.82
SDHB-203ENST00000466613 LMTK3Q96Q04 1460 aa26.4■■□□□ 1.82
SDHB-203ENST00000466613 PLPPR3Q6T4P5 718 aa26.39■■□□□ 1.82
SDHB-203ENST00000466613 ZNF644Q9H582 1327 aaPredicted RBP26.39■■□□□ 1.81
SDHB-203ENST00000466613 MBD5Q9P267 1494 aa26.38■■□□□ 1.81
SDHB-203ENST00000466613 CAMSAP2Q08AD1 1489 aa26.35■■□□□ 1.81
SDHB-203ENST00000466613 PLXNC1O60486 1568 aa26.34■■□□□ 1.81
SDHB-203ENST00000466613 ADGBQ8N7X0 1667 aa26.34■■□□□ 1.81
SDHB-203ENST00000466613 A2MP01023 1474 aa26.3■■□□□ 1.8
SDHB-203ENST00000466613 C3P01024 1663 aa26.3■■□□□ 1.8
SDHB-203ENST00000466613 PREX1Q8TCU6 1659 aa26.3■■□□□ 1.8
SDHB-203ENST00000466613 CCDC141Q6ZP82 1450 aa26.3■■□□□ 1.8
SDHB-203ENST00000466613 KANK4Q5T7N3 995 aaPredicted RBP26.29■■□□□ 1.8
SDHB-203ENST00000466613 RTEL1-TNFRSF6BF6WH68 1400 aa26.28■■□□□ 1.8
SDHB-203ENST00000466613 CEBPAP49715 358 aaPredicted RBP26.27■■□□□ 1.8
SDHB-203ENST00000466613 ARHGEF5Q12774 1597 aa26.26■■□□□ 1.79
SDHB-203ENST00000466613 ESF1Q9H501 851 aaKnown RBP26.26■■□□□ 1.79
SDHB-203ENST00000466613 CNTLNQ9NXG0 1405 aa26.25■■□□□ 1.79
SDHB-203ENST00000466613 SETD1BQ9UPS6 1966 aaKnown RBP26.24■■□□□ 1.79
SDHB-203ENST00000466613 MROH2AA6NES4 1674 aa26.24■■□□□ 1.79
SDHB-203ENST00000466613 RSPH4AQ5TD94 716 aa26.23■■□□□ 1.79
SDHB-203ENST00000466613 MYOM3Q5VTT5 1437 aa26.21■■□□□ 1.79
SDHB-203ENST00000466613 HSPA2P54652 639 aa26.2■■□□□ 1.78
SDHB-203ENST00000466613 APLP2Q06481 763 aa26.2■■□□□ 1.78
SDHB-203ENST00000466613 MIA2Q96PC5 1412 aa26.19■■□□□ 1.78
SDHB-203ENST00000466613 CLTCQ00610 1675 aaKnown RBP26.19■■□□□ 1.78
SDHB-203ENST00000466613 UHRF1BP1Q6BDS2 1440 aa26.16■■□□□ 1.78
SDHB-203ENST00000466613 DHX29Q7Z478 1369 aaKnown RBP26.16■■□□□ 1.78
SDHB-203ENST00000466613 MAST1Q9Y2H9 1570 aa26.14■■□□□ 1.78
SDHB-203ENST00000466613 TSPY4P0CV99 314 aa26.12■■□□□ 1.77
SDHB-203ENST00000466613 TSPY10P0CW01 314 aa26.12■■□□□ 1.77
SDHB-203ENST00000466613 GGT6Q6P531 493 aa26.12■■□□□ 1.77
SDHB-203ENST00000466613 ZMYM3Q14202 1370 aa26.1■■□□□ 1.77
SDHB-203ENST00000466613 NPATQ14207 1427 aa26.09■■□□□ 1.77
SDHB-203ENST00000466613 PPP6R1Q9UPN7 881 aa26.09■■□□□ 1.77
SDHB-203ENST00000466613 PTPN23Q9H3S7 1636 aa26.08■■□□□ 1.77
SDHB-203ENST00000466613 CROCC2H7BZ55 1655 aa26.05■■□□□ 1.76
SDHB-203ENST00000466613 STRCQ7RTU9 1775 aa26.04■■□□□ 1.76
SDHB-203ENST00000466613 FAM135AQ9P2D6 1515 aa26.04■■□□□ 1.76
SDHB-203ENST00000466613 KIF3BO15066 747 aa26.03■■□□□ 1.76
SDHB-203ENST00000466613 PTPRKQ15262 1439 aa26.01■■□□□ 1.75
SDHB-203ENST00000466613 ILDR1Q86SU0 546 aaPredicted RBP26.01■■□□□ 1.75
SDHB-203ENST00000466613 MYO3AQ8NEV4 1616 aa26■■□□□ 1.75
SDHB-203ENST00000466613 EIF2AK4Q9P2K8 1649 aaKnown RBP26■■□□□ 1.75
SDHB-203ENST00000466613 KDM5DQ9BY66 1539 aa26■■□□□ 1.75
SDHB-203ENST00000466613 FGD6Q6ZV73 1430 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms