RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 GPATCH8Q9UKJ3 1502 aaKnown RBP22.55■■□□□ 1.2
DNMT3A-208ENST00000466601 AKNAQ7Z591 1439 aa22.54■■□□□ 1.2
DNMT3A-208ENST00000466601 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
DNMT3A-208ENST00000466601 CFAP74Q9C0B2 1584 aa22.53■■□□□ 1.2
DNMT3A-208ENST00000466601 CDC42BPAQ5VT25 1732 aa22.53■■□□□ 1.2
DNMT3A-208ENST00000466601 PREX2Q70Z35 1606 aa22.53■■□□□ 1.2
DNMT3A-208ENST00000466601 CDC42BPBQ9Y5S2 1711 aa22.52■■□□□ 1.2
DNMT3A-208ENST00000466601 CFDP1Q9UEE9 299 aaPredicted RBP22.51■■□□□ 1.19
DNMT3A-208ENST00000466601 ZNF777Q9ULD5 760 aaPredicted RBP22.48■■□□□ 1.19
DNMT3A-208ENST00000466601 ADGRL1O94910 1474 aa22.47■■□□□ 1.19
DNMT3A-208ENST00000466601 SCAPERQ9BY12 1400 aa22.45■■□□□ 1.18
DNMT3A-208ENST00000466601 ITSN2Q9NZM3 1697 aa22.45■■□□□ 1.18
DNMT3A-208ENST00000466601 DENND4BO75064 1496 aaPredicted RBP22.44■■□□□ 1.18
DNMT3A-208ENST00000466601 RAPGEF3O95398 923 aa22.44■■□□□ 1.18
DNMT3A-208ENST00000466601 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
DNMT3A-208ENST00000466601 MYOM3Q5VTT5 1437 aa22.4■■□□□ 1.18
DNMT3A-208ENST00000466601 SAMD9LQ8IVG5 1584 aa22.4■■□□□ 1.18
DNMT3A-208ENST00000466601 ZNF644Q9H582 1327 aaPredicted RBP22.39■■□□□ 1.18
DNMT3A-208ENST00000466601 ABCC1P33527 1531 aa22.38■■□□□ 1.17
DNMT3A-208ENST00000466601 PLEKHH2Q8IVE3 1493 aa22.37■■□□□ 1.17
DNMT3A-208ENST00000466601 POGZQ7Z3K3 1410 aa22.37■■□□□ 1.17
DNMT3A-208ENST00000466601 MIA2Q96PC5 1412 aa22.37■■□□□ 1.17
DNMT3A-208ENST00000466601 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
DNMT3A-208ENST00000466601 HNRNPMP52272 730 aaKnown RBP eCLIP22.36■■□□□ 1.17
DNMT3A-208ENST00000466601 KIAA1107Q9UPP5 1409 aa22.36■■□□□ 1.17
DNMT3A-208ENST00000466601 FRMPD1Q5SYB0 1578 aa22.36■■□□□ 1.17
DNMT3A-208ENST00000466601 RICTORQ6R327 1708 aa22.35■■□□□ 1.17
DNMT3A-208ENST00000466601 AFAP1Q8N556 730 aa22.35■■□□□ 1.17
DNMT3A-208ENST00000466601 TRAPPC8Q9Y2L5 1435 aa22.33■■□□□ 1.17
DNMT3A-208ENST00000466601 SYCP2Q9BX26 1530 aa22.33■■□□□ 1.17
DNMT3A-208ENST00000466601 CAMSAP2Q08AD1 1489 aa22.33■■□□□ 1.16
DNMT3A-208ENST00000466601 ZNF518AQ6AHZ1 1483 aa22.33■■□□□ 1.16
DNMT3A-208ENST00000466601 FGD6Q6ZV73 1430 aa22.3■■□□□ 1.16
DNMT3A-208ENST00000466601 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
DNMT3A-208ENST00000466601 ZMYM4Q5VZL5 1548 aa22.28■■□□□ 1.16
DNMT3A-208ENST00000466601 KDM5CP41229 1560 aa22.26■■□□□ 1.15
DNMT3A-208ENST00000466601 RSPH4AQ5TD94 716 aa22.26■■□□□ 1.15
DNMT3A-208ENST00000466601 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
DNMT3A-208ENST00000466601 MAGI2Q86UL8 1455 aa22.26■■□□□ 1.15
DNMT3A-208ENST00000466601 PTPN23Q9H3S7 1636 aa22.25■■□□□ 1.15
DNMT3A-208ENST00000466601 TCOF1Q13428 1488 aaKnown RBP22.23■■□□□ 1.15
DNMT3A-208ENST00000466601 SPAG9O60271 1321 aaKnown RBP22.23■■□□□ 1.15
DNMT3A-208ENST00000466601 MLH3Q9UHC1 1453 aa22.22■■□□□ 1.15
DNMT3A-208ENST00000466601 YEATS2Q9ULM3 1422 aa22.22■■□□□ 1.15
DNMT3A-208ENST00000466601 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
DNMT3A-208ENST00000466601 ZFYVE16Q7Z3T8 1539 aa22.21■■□□□ 1.15
DNMT3A-208ENST00000466601 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
DNMT3A-208ENST00000466601 HECW2Q9P2P5 1572 aa22.21■■□□□ 1.15
DNMT3A-208ENST00000466601 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
DNMT3A-208ENST00000466601 ARHGEF40Q8TER5 1519 aa22.18■■□□□ 1.14
DNMT3A-208ENST00000466601 TSPY4P0CV99 314 aa22.18■■□□□ 1.14
DNMT3A-208ENST00000466601 TSPY10P0CW01 314 aa22.18■■□□□ 1.14
DNMT3A-208ENST00000466601 KIDINS220Q9ULH0 1771 aa22.15■■□□□ 1.14
DNMT3A-208ENST00000466601 ATP10AO60312 1499 aa22.15■■□□□ 1.14
DNMT3A-208ENST00000466601 RTEL1-TNFRSF6BF6WH68 1400 aa22.14■■□□□ 1.14
DNMT3A-208ENST00000466601 ATP7AQ04656 1500 aa22.14■■□□□ 1.13
DNMT3A-208ENST00000466601 ABCC5O15440 1437 aa22.14■■□□□ 1.13
DNMT3A-208ENST00000466601 INO80Q9ULG1 1556 aaPredicted RBP22.13■■□□□ 1.13
DNMT3A-208ENST00000466601 ABCA6Q8N139 1617 aa22.12■■□□□ 1.13
DNMT3A-208ENST00000466601 DAPK1P53355 1430 aa22.12■■□□□ 1.13
DNMT3A-208ENST00000466601 DIP2CQ9Y2E4 1556 aa22.12■■□□□ 1.13
DNMT3A-208ENST00000466601 C9orf84Q5VXU9 1444 aa22.11■■□□□ 1.13
DNMT3A-208ENST00000466601 RRBP1Q9P2E9 1410 aaKnown RBP22.11■■□□□ 1.13
DNMT3A-208ENST00000466601 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
DNMT3A-208ENST00000466601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.1■■□□□ 1.13
DNMT3A-208ENST00000466601 ARID4BQ4LE39 1312 aaPredicted RBP22.09■■□□□ 1.13
DNMT3A-208ENST00000466601 MAST1Q9Y2H9 1570 aa22.08■■□□□ 1.13
DNMT3A-208ENST00000466601 SHANK2Q9UPX8 1470 aa22.07■■□□□ 1.12
DNMT3A-208ENST00000466601 CROCC2H7BZ55 1655 aa22.05■■□□□ 1.12
DNMT3A-208ENST00000466601 CHIC2Q9UKJ5 165 aa22.05■■□□□ 1.12
DNMT3A-208ENST00000466601 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
DNMT3A-208ENST00000466601 A2MP01023 1474 aa22.03■■□□□ 1.12
DNMT3A-208ENST00000466601 ITGAEP38570 1179 aa22.02■■□□□ 1.12
DNMT3A-208ENST00000466601 SIGLEC1Q9BZZ2 1709 aa22.02■■□□□ 1.12
DNMT3A-208ENST00000466601 DHX29Q7Z478 1369 aaKnown RBP22.01■■□□□ 1.11
DNMT3A-208ENST00000466601 ADGBQ8N7X0 1667 aa22.01■■□□□ 1.11
DNMT3A-208ENST00000466601 PTPRKQ15262 1439 aa22■■□□□ 1.11
DNMT3A-208ENST00000466601 AGLP35573 1532 aa22■■□□□ 1.11
DNMT3A-208ENST00000466601 ANKRD30AQ9BXX3 1397 aa21.99■■□□□ 1.11
DNMT3A-208ENST00000466601 RRP7BPQ9NSQ0 103 aa21.99■■□□□ 1.11
DNMT3A-208ENST00000466601 PLXNC1O60486 1568 aa21.99■■□□□ 1.11
DNMT3A-208ENST00000466601 KDM4FA0A1W2PPD8 638 aa21.98■■□□□ 1.11
DNMT3A-208ENST00000466601 MLECQ14165 292 aa21.98■■□□□ 1.11
DNMT3A-208ENST00000466601 KIF15Q9NS87 1388 aa21.97■■□□□ 1.11
DNMT3A-208ENST00000466601 NCOA1Q15788 1441 aa21.97■■□□□ 1.11
DNMT3A-208ENST00000466601 ADGRL2O95490 1459 aa21.96■■□□□ 1.11
DNMT3A-208ENST00000466601 BCORL1Q5H9F3 1711 aa21.95■■□□□ 1.1
DNMT3A-208ENST00000466601 DUOX2Q9NRD8 1548 aa21.93■■□□□ 1.1
DNMT3A-208ENST00000466601 ROCK1Q13464 1354 aa21.92■■□□□ 1.1
DNMT3A-208ENST00000466601 KIF3BO15066 747 aa21.92■■□□□ 1.1
DNMT3A-208ENST00000466601 GGT6Q6P531 493 aa21.9■■□□□ 1.1
DNMT3A-208ENST00000466601 ADAMTSL3P82987 1691 aa21.9■■□□□ 1.1
DNMT3A-208ENST00000466601 ERBINQ96RT1 1412 aa21.88■■□□□ 1.09
DNMT3A-208ENST00000466601 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
DNMT3A-208ENST00000466601 MADDQ8WXG6 1647 aa21.85■■□□□ 1.09
DNMT3A-208ENST00000466601 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
DNMT3A-208ENST00000466601 ANKRD50Q9ULJ7 1429 aa21.83■■□□□ 1.09
DNMT3A-208ENST00000466601 ESF1Q9H501 851 aaKnown RBP21.83■■□□□ 1.09
DNMT3A-208ENST00000466601 PPP6R1Q9UPN7 881 aa21.83■■□□□ 1.09
DNMT3A-208ENST00000466601 FER1L4A9Z1Z3 1794 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms