RNA–Protein interactions for RNA: ENST00000466432.1

SRRT-207, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-207ENST00000466432 MAGI2Q86UL8 1455 aa21.72■■□□□ 1.07
SRRT-207ENST00000466432 SCAPERQ9BY12 1400 aa21.7■■□□□ 1.06
SRRT-207ENST00000466432 TROQ12816 1431 aaPredicted RBP21.69■■□□□ 1.06
SRRT-207ENST00000466432 LMTK3Q96Q04 1460 aa21.68■■□□□ 1.06
SRRT-207ENST00000466432 PCF11O94913 1555 aaKnown RBP21.68■■□□□ 1.06
SRRT-207ENST00000466432 ARID4BQ4LE39 1312 aaPredicted RBP21.66■■□□□ 1.06
SRRT-207ENST00000466432 CDC42BPBQ9Y5S2 1711 aa21.65■■□□□ 1.06
SRRT-207ENST00000466432 KDM5CP41229 1560 aa21.64■■□□□ 1.05
SRRT-207ENST00000466432 FER1L4A9Z1Z3 1794 aa21.62■■□□□ 1.05
SRRT-207ENST00000466432 ARHGEF12Q9NZN5 1544 aa21.6■■□□□ 1.05
SRRT-207ENST00000466432 PREX2Q70Z35 1606 aa21.6■■□□□ 1.05
SRRT-207ENST00000466432 ATP1B4Q9UN42 357 aaPredicted RBP21.6■■□□□ 1.05
SRRT-207ENST00000466432 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
SRRT-207ENST00000466432 ATP10AO60312 1499 aa21.59■■□□□ 1.05
SRRT-207ENST00000466432 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
SRRT-207ENST00000466432 CDK11AQ9UQ88 783 aaPredicted RBP21.59■■□□□ 1.05
SRRT-207ENST00000466432 ARHGAP5Q13017 1502 aa21.59■■□□□ 1.05
SRRT-207ENST00000466432 ZNF518AQ6AHZ1 1483 aa21.58■■□□□ 1.04
SRRT-207ENST00000466432 CLIP1P30622 1438 aa21.57■■□□□ 1.04
SRRT-207ENST00000466432 C9orf84Q5VXU9 1444 aa21.57■■□□□ 1.04
SRRT-207ENST00000466432 CCDC18Q5T9S5 1454 aa21.57■■□□□ 1.04
SRRT-207ENST00000466432 DIP2CQ9Y2E4 1556 aa21.55■■□□□ 1.04
SRRT-207ENST00000466432 CDC42BPAQ5VT25 1732 aa21.55■■□□□ 1.04
SRRT-207ENST00000466432 ABCC1P33527 1531 aa21.55■■□□□ 1.04
SRRT-207ENST00000466432 REREQ9P2R6 1566 aa21.54■■□□□ 1.04
SRRT-207ENST00000466432 ABCA6Q8N139 1617 aa21.53■■□□□ 1.04
SRRT-207ENST00000466432 ITSN2Q9NZM3 1697 aa21.53■■□□□ 1.04
SRRT-207ENST00000466432 FYCO1Q9BQS8 1478 aa21.52■■□□□ 1.04
SRRT-207ENST00000466432 AFAP1Q8N556 730 aa21.51■■□□□ 1.03
SRRT-207ENST00000466432 MLH3Q9UHC1 1453 aa21.5■■□□□ 1.03
SRRT-207ENST00000466432 TRAPPC8Q9Y2L5 1435 aa21.48■■□□□ 1.03
SRRT-207ENST00000466432 MLECQ14165 292 aa21.48■■□□□ 1.03
SRRT-207ENST00000466432 KIDINS220Q9ULH0 1771 aa21.47■■□□□ 1.03
SRRT-207ENST00000466432 PREX1Q8TCU6 1659 aa21.45■■□□□ 1.02
SRRT-207ENST00000466432 HSPA2P54652 639 aa21.45■■□□□ 1.02
SRRT-207ENST00000466432 AGLP35573 1532 aa21.45■■□□□ 1.02
SRRT-207ENST00000466432 SAMD9LQ8IVG5 1584 aa21.44■■□□□ 1.02
SRRT-207ENST00000466432 FBXO41Q8TF61 875 aa21.41■■□□□ 1.02
SRRT-207ENST00000466432 C3P01024 1663 aa21.4■■□□□ 1.02
SRRT-207ENST00000466432 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.02
SRRT-207ENST00000466432 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
SRRT-207ENST00000466432 CEBPAP49715 358 aaPredicted RBP21.37■■□□□ 1.01
SRRT-207ENST00000466432 SYCP2Q9BX26 1530 aa21.37■■□□□ 1.01
SRRT-207ENST00000466432 STRCQ7RTU9 1775 aa21.36■■□□□ 1.01
SRRT-207ENST00000466432 SETD1BQ9UPS6 1966 aaKnown RBP21.33■■□□□ 1.01
SRRT-207ENST00000466432 INO80Q9ULG1 1556 aaPredicted RBP21.32■■□□□ 1
SRRT-207ENST00000466432 PLXNC1O60486 1568 aa21.3■■□□□ 1
SRRT-207ENST00000466432 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
SRRT-207ENST00000466432 TIAM1Q13009 1591 aa21.29■■□□□ 1
SRRT-207ENST00000466432 MROH2AA6NES4 1674 aa21.28■■□□□ 1
SRRT-207ENST00000466432 ATP7AQ04656 1500 aa21.28■■□□□ 1
SRRT-207ENST00000466432 MYT1LQ9UL68 1186 aa21.27■■□□□ 1
SRRT-207ENST00000466432 UHRF1BP1Q6BDS2 1440 aa21.27■■□□□ 1
SRRT-207ENST00000466432 SUPT6HQ7KZ85 1726 aaKnown RBP21.26■□□□□ 0.99
SRRT-207ENST00000466432 PLEKHH2Q8IVE3 1493 aa21.25■□□□□ 0.99
SRRT-207ENST00000466432 EHBP1L1Q8N3D4 1523 aa21.24■□□□□ 0.99
SRRT-207ENST00000466432 HNRNPMP52272 730 aaKnown RBP eCLIP21.24■□□□□ 0.99
SRRT-207ENST00000466432 CNTLNQ9NXG0 1405 aa21.23■□□□□ 0.99
SRRT-207ENST00000466432 ZNF777Q9ULD5 760 aaPredicted RBP21.23■□□□□ 0.99
SRRT-207ENST00000466432 MTUS2Q5JR59 1369 aa21.23■□□□□ 0.99
SRRT-207ENST00000466432 CCNB3Q8WWL7 1395 aa21.23■□□□□ 0.99
SRRT-207ENST00000466432 CEP162Q5TB80 1403 aa21.21■□□□□ 0.99
SRRT-207ENST00000466432 MBD5Q9P267 1494 aa21.21■□□□□ 0.99
SRRT-207ENST00000466432 SPAG9O60271 1321 aaKnown RBP21.21■□□□□ 0.99
SRRT-207ENST00000466432 CFDP1Q9UEE9 299 aaPredicted RBP21.2■□□□□ 0.98
SRRT-207ENST00000466432 A2MP01023 1474 aa21.2■□□□□ 0.98
SRRT-207ENST00000466432 CERKQ8TCT0 537 aa21.19■□□□□ 0.98
SRRT-207ENST00000466432 CLTCQ00610 1675 aaKnown RBP21.18■□□□□ 0.98
SRRT-207ENST00000466432 ADGBQ8N7X0 1667 aa21.18■□□□□ 0.98
SRRT-207ENST00000466432 NPATQ14207 1427 aa21.17■□□□□ 0.98
SRRT-207ENST00000466432 ZNF644Q9H582 1327 aaPredicted RBP21.16■□□□□ 0.98
SRRT-207ENST00000466432 PTPRTO14522 1441 aa21.15■□□□□ 0.98
SRRT-207ENST00000466432 ZNF142P52746 1687 aaPredicted RBP21.14■□□□□ 0.97
SRRT-207ENST00000466432 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
SRRT-207ENST00000466432 ZMYM3Q14202 1370 aa21.13■□□□□ 0.97
SRRT-207ENST00000466432 MYO3AQ8NEV4 1616 aa21.11■□□□□ 0.97
SRRT-207ENST00000466432 RTEL1-TNFRSF6BF6WH68 1400 aa21.11■□□□□ 0.97
SRRT-207ENST00000466432 NCOA2Q15596 1464 aa21.1■□□□□ 0.97
SRRT-207ENST00000466432 ESF1Q9H501 851 aaKnown RBP21.1■□□□□ 0.97
SRRT-207ENST00000466432 DMRT2Q9Y5R5 561 aa21.1■□□□□ 0.97
SRRT-207ENST00000466432 LTBP4Q8N2S1 1624 aa21.1■□□□□ 0.97
SRRT-207ENST00000466432 CAMSAP1Q5T5Y3 1602 aa21.09■□□□□ 0.97
SRRT-207ENST00000466432 PTPRKQ15262 1439 aa21.09■□□□□ 0.97
SRRT-207ENST00000466432 CAMSAP2Q08AD1 1489 aa21.07■□□□□ 0.96
SRRT-207ENST00000466432 CCDC141Q6ZP82 1450 aa21.05■□□□□ 0.96
SRRT-207ENST00000466432 CEP170BQ9Y4F5 1589 aaPredicted RBP21.05■□□□□ 0.96
SRRT-207ENST00000466432 ARHGEF5Q12774 1597 aa21.03■□□□□ 0.96
SRRT-207ENST00000466432 DHX29Q7Z478 1369 aaKnown RBP21.03■□□□□ 0.96
SRRT-207ENST00000466432 PLA2R1Q13018 1463 aa21.01■□□□□ 0.95
SRRT-207ENST00000466432 GGT6Q6P531 493 aa21.01■□□□□ 0.95
SRRT-207ENST00000466432 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
SRRT-207ENST00000466432 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
SRRT-207ENST00000466432 TCOF1Q13428 1488 aaKnown RBP21.01■□□□□ 0.95
SRRT-207ENST00000466432 LRRC9Q6ZRR7 1453 aa21■□□□□ 0.95
SRRT-207ENST00000466432 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
SRRT-207ENST00000466432 IQSEC2Q5JU85 1478 aa20.98■□□□□ 0.95
SRRT-207ENST00000466432 DNMT1P26358 1616 aaKnown RBP20.96■□□□□ 0.95
SRRT-207ENST00000466432 MAP3K1Q13233 1512 aa20.96■□□□□ 0.95
SRRT-207ENST00000466432 KDM5DQ9BY66 1539 aa20.96■□□□□ 0.95
SRRT-207ENST00000466432 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms