RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ABCA9Q8IUA7 1624 aa18.31■□□□□ 0.52
VPS16-206ENST00000466415 ZNF777Q9ULD5 760 aaPredicted RBP18.3■□□□□ 0.52
VPS16-206ENST00000466415 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.52
VPS16-206ENST00000466415 PLCH2O75038 1416 aa18.27■□□□□ 0.52
VPS16-206ENST00000466415 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
VPS16-206ENST00000466415 DNAJC5Q9H3Z4 198 aa18.24■□□□□ 0.51
VPS16-206ENST00000466415 SAMD9LQ8IVG5 1584 aa18.24■□□□□ 0.51
VPS16-206ENST00000466415 ZNF644Q9H582 1327 aaPredicted RBP18.23■□□□□ 0.51
VPS16-206ENST00000466415 DNMT1P26358 1616 aaKnown RBP18.23■□□□□ 0.51
VPS16-206ENST00000466415 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
VPS16-206ENST00000466415 EFCAB2Q5VUJ9 269 aa18.22■□□□□ 0.51
VPS16-206ENST00000466415 DAPK1P53355 1430 aa18.22■□□□□ 0.51
VPS16-206ENST00000466415 CD109Q6YHK3 1445 aa18.21■□□□□ 0.51
VPS16-206ENST00000466415 GLI2P10070 1586 aa18.21■□□□□ 0.51
VPS16-206ENST00000466415 DIP2BQ9P265 1576 aa18.21■□□□□ 0.51
VPS16-206ENST00000466415 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
VPS16-206ENST00000466415 FANCAO15360 1455 aa18.19■□□□□ 0.5
VPS16-206ENST00000466415 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
VPS16-206ENST00000466415 ARHGEF5Q12774 1597 aa18.17■□□□□ 0.5
VPS16-206ENST00000466415 ABCC5O15440 1437 aa18.17■□□□□ 0.5
VPS16-206ENST00000466415 CROCC2H7BZ55 1655 aa18.17■□□□□ 0.5
VPS16-206ENST00000466415 ABCC1P33527 1531 aa18.17■□□□□ 0.5
VPS16-206ENST00000466415 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
VPS16-206ENST00000466415 CCDC141Q6ZP82 1450 aa18.16■□□□□ 0.5
VPS16-206ENST00000466415 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
VPS16-206ENST00000466415 KIAA1107Q9UPP5 1409 aa18.15■□□□□ 0.5
VPS16-206ENST00000466415 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
VPS16-206ENST00000466415 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.5
VPS16-206ENST00000466415 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
VPS16-206ENST00000466415 ADGBQ8N7X0 1667 aa18.13■□□□□ 0.49
VPS16-206ENST00000466415 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
VPS16-206ENST00000466415 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
VPS16-206ENST00000466415 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
VPS16-206ENST00000466415 SETD5Q9C0A6 1442 aa18.12■□□□□ 0.49
VPS16-206ENST00000466415 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
VPS16-206ENST00000466415 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
VPS16-206ENST00000466415 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
VPS16-206ENST00000466415 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
VPS16-206ENST00000466415 C9orf84Q5VXU9 1444 aa18.11■□□□□ 0.49
VPS16-206ENST00000466415 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
VPS16-206ENST00000466415 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
VPS16-206ENST00000466415 NEO1Q92859 1461 aa18.09■□□□□ 0.49
VPS16-206ENST00000466415 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
VPS16-206ENST00000466415 ARHGEF12Q9NZN5 1544 aa18.08■□□□□ 0.49
VPS16-206ENST00000466415 ADGRL2O95490 1459 aa18.08■□□□□ 0.49
VPS16-206ENST00000466415 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 SCAPERQ9BY12 1400 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 ANKRD30AQ9BXX3 1397 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 RRP7BPQ9NSQ0 103 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
VPS16-206ENST00000466415 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
VPS16-206ENST00000466415 NAIPQ13075 1403 aa18.06■□□□□ 0.48
VPS16-206ENST00000466415 TRAPPC8Q9Y2L5 1435 aa18.05■□□□□ 0.48
VPS16-206ENST00000466415 TSPOAP1O95153 1857 aa18.03■□□□□ 0.48
VPS16-206ENST00000466415 NCOA1Q15788 1441 aa18.02■□□□□ 0.48
VPS16-206ENST00000466415 ZNF518AQ6AHZ1 1483 aa18.01■□□□□ 0.47
VPS16-206ENST00000466415 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
VPS16-206ENST00000466415 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
VPS16-206ENST00000466415 POGZQ7Z3K3 1410 aa18■□□□□ 0.47
VPS16-206ENST00000466415 CCER1Q8TC90 406 aaPredicted RBP18■□□□□ 0.47
VPS16-206ENST00000466415 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
VPS16-206ENST00000466415 PLXNC1O60486 1568 aa18■□□□□ 0.47
VPS16-206ENST00000466415 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
VPS16-206ENST00000466415 KIF15Q9NS87 1388 aa17.99■□□□□ 0.47
VPS16-206ENST00000466415 ZFYVE16Q7Z3T8 1539 aa17.98■□□□□ 0.47
VPS16-206ENST00000466415 HRCP23327 699 aa17.98■□□□□ 0.47
VPS16-206ENST00000466415 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
VPS16-206ENST00000466415 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
VPS16-206ENST00000466415 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
VPS16-206ENST00000466415 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
VPS16-206ENST00000466415 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
VPS16-206ENST00000466415 ACIN1Q9UKV3 1341 aaKnown RBP17.96■□□□□ 0.46
VPS16-206ENST00000466415 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
VPS16-206ENST00000466415 KDM5CP41229 1560 aa17.95■□□□□ 0.46
VPS16-206ENST00000466415 HECW2Q9P2P5 1572 aa17.94■□□□□ 0.46
VPS16-206ENST00000466415 KDM6BO15054 1643 aa17.94■□□□□ 0.46
VPS16-206ENST00000466415 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
VPS16-206ENST00000466415 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
VPS16-206ENST00000466415 RICTORQ6R327 1708 aa17.91■□□□□ 0.46
VPS16-206ENST00000466415 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
VPS16-206ENST00000466415 ERBINQ96RT1 1412 aa17.89■□□□□ 0.46
VPS16-206ENST00000466415 MLH3Q9UHC1 1453 aa17.89■□□□□ 0.45
VPS16-206ENST00000466415 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
VPS16-206ENST00000466415 FRMPD1Q5SYB0 1578 aa17.88■□□□□ 0.45
VPS16-206ENST00000466415 KIDINS220Q9ULH0 1771 aa17.88■□□□□ 0.45
VPS16-206ENST00000466415 ZMYM4Q5VZL5 1548 aa17.87■□□□□ 0.45
VPS16-206ENST00000466415 ABCA6Q8N139 1617 aa17.83■□□□□ 0.45
VPS16-206ENST00000466415 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
VPS16-206ENST00000466415 A2MP01023 1474 aa17.82■□□□□ 0.44
VPS16-206ENST00000466415 CLSPNQ9HAW4 1339 aa17.82■□□□□ 0.44
VPS16-206ENST00000466415 EIF2AK4Q9P2K8 1649 aaKnown RBP17.82■□□□□ 0.44
VPS16-206ENST00000466415 MAGI2Q86UL8 1455 aa17.82■□□□□ 0.44
VPS16-206ENST00000466415 DHX29Q7Z478 1369 aaKnown RBP17.81■□□□□ 0.44
VPS16-206ENST00000466415 UNC13BO14795 1591 aa17.81■□□□□ 0.44
VPS16-206ENST00000466415 DIP2CQ9Y2E4 1556 aa17.81■□□□□ 0.44
VPS16-206ENST00000466415 KDM5DQ9BY66 1539 aa17.79■□□□□ 0.44
VPS16-206ENST00000466415 NUP155O75694 1391 aa17.79■□□□□ 0.44
VPS16-206ENST00000466415 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
VPS16-206ENST00000466415 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms